KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:30:48 2014 Check: 00 .. Name: ENSP00000355185/1-1040 Len: 1296 Check: 2727 Weight: 1.00 Name: ENSBTAP00000026896/1-1051 Len: 1296 Check: 1693 Weight: 1.00 Name: ENSTTRP00000011371/1-1044 Len: 1296 Check: 8925 Weight: 1.00 Name: bmy_03051T0/1-1176 Len: 1296 Check: 2708 Weight: 1.00 Name: BACU004662/1-1007 Len: 1296 Check: 9652 Weight: 1.00 // 1 50 ENSP00000355185/1-1040 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000026896/1-1051 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000011371/1-1044 ---------- ---------- ---------- ---------- ---------- bmy_03051T0/1-1176 MCPPFTNPRS AADADAAAAW GQRLGWAKRL CPARRQNHAS PTASGEGAVP BACU004662/1-1007 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000355185/1-1040 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000026896/1-1051 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000011371/1-1044 ---------- ---------- ---------- ---------- ---------- bmy_03051T0/1-1176 EEGEVPGGVP TPKPAPHLPE TRALTSPAPS RPPSADTDQA VLLLLGDGVE BACU004662/1-1007 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000355185/1-1040 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000026896/1-1051 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000011371/1-1044 ---------- ---------- ---------- ---------- ---------- bmy_03051T0/1-1176 QSVLQRGLSR EQAREAAAPG SGRRHVLSGR SRGGRRARGT VSFGERRTYG BACU004662/1-1007 ---------- ---------- ---------- ---------- ---------- 151 200 ENSP00000355185/1-1040 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000026896/1-1051 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000011371/1-1044 ---------- ---------- ---------- ---------- ---------- bmy_03051T0/1-1176 PLVSKPHIRL TLHQPHATLT ALFSNAKVQI DAIPRHVIKL PSQPTPPLLN BACU004662/1-1007 ---------- ---------- ---------- ---------- ---------- 201 250 ENSP00000355185/1-1040 ---------- ---------- ---------- ---------- --MLED-ISE ENSBTAP00000026896/1-1051 ---------- ---------- ---------- ---------- --MLEDAFLE ENSTTRP00000011371/1-1044 ---------- ---------- ---------- ---------- --MLEDAFLE bmy_03051T0/1-1176 LLAAAEPGHS EHQIQHGKGF WASARISRFD TALGKRSCSR HGTKEDAFLE BACU004662/1-1007 ---------- ---------- ---------- ---------- --MLEDAFLE 251 300 ENSP00000355185/1-1040 EDIWEYKSKR KPKRVDPNNG SKNILKSVEK ATDGKYQSKR SRNRKRAAEA ENSBTAP00000026896/1-1051 EDIWEYKSKR KPKRVRPNNC SENIPDSVEK ATDGQHQSKR NRNKKRTVET ENSTTRP00000011371/1-1044 QDIWEYKSKR KPKQVHPNNC SENIPESVEK ATDGQYQSKR NRNKKRNVKG bmy_03051T0/1-1176 QXIWEYKSKR KPKPVHPNNC SENIPKSVEK ATDGQYQSKR NRNKKRTVEG BACU004662/1-1007 QDIWEYKSKR KPKPVHPNNC SENIPKSVEK ATDGQYQSKR NRNKKRTVEG 301 350 ENSP00000355185/1-1040 -KEVKDHEVP LGNAGCQTSV ASSQNSSCGD GIQQTQDKET TPGKLCRTQK ENSBTAP00000026896/1-1051 KKKVKTPETC LRETDSQTSV ASSQSSICGD GVQQCQDTET TPEKRGRTHE ENSTTRP00000011371/1-1044 KKKVKAPETC LGEKDSQTSV ASSQNSSCGD GIQQCQDREA TPGKHCRTHK bmy_03051T0/1-1176 KKKVKAPETC LGETDSQTSV ASSQNSSCGD GIQQCQDREA TPGKHCRTHK BACU004662/1-1007 KKKVKAPETC LGETDSQTSV ASSQNSSCGD GVQQCQDREA TPGKHCRTHK 351 400 ENSP00000355185/1-1040 SQHVSPKIRP VYDGYCPNCQ MPFSSLIGQT PRWHVFECLD SPPRSETECP ENSBTAP00000026896/1-1051 TKHMSPKTRP VYDGYCPNCQ MPFSSLLGQT PRWHVFECLD STPVSGTECP ENSTTRP00000011371/1-1044 NKHVSPKIRP VYDGYCPNCQ MPFSSLLGQT PRWHVFECLD SIPVSETECP bmy_03051T0/1-1176 NKHVSPKIRP VYDGYCPNCQ MPFSSLLGQT PRWHVFECLD SIPVSETECP BACU004662/1-1007 NKHVSPKIRP VYDGYCPNCQ MPFSSLLGQT PRWHVFECLD SIPVSETECP 401 450 ENSP00000355185/1-1040 DGLLCTSTIP FHYKRYTHFL LAQSRAGDHP FSSPSPASGG SFSETKSGVL ENSBTAP00000026896/1-1051 DGLQCSSTIP SHYQRYTHLL LAQSRAGNSP LKDPSHGSGR SFRETNSDLL ENSTTRP00000011371/1-1044 DALQCSSTIP SHYKRYTHHL LAQSRAGNSL LSDPSHESGG SFSEANSGFL bmy_03051T0/1-1176 DALQCSSTIP SHYKRYTHLL LAQSRASNSP FSDPSHES-- ---------- BACU004662/1-1007 DALQCSSTIP SHYKRYTHLL LAQSRASNCP FSDPSHESGG SFSETNSGFL 451 500 ENSP00000355185/1-1040 CSLEERWSSY QNQTDN---S VSNDPLLMTQ YFKKSPSLTE ASEKIS--TH ENSBTAP00000026896/1-1051 CSLEKRWSPH QKQTENL-KN VSADPLLVTQ CLKSSQSPTE TNKKISSLTN ENSTTRP00000011371/1-1044 CSRKERWSPY QKQTDNLKKN VSTDPLLVTQ CLRKSQSPTE TDKKVSSSTN bmy_03051T0/1-1176 ---------- ---------- -------VTQ CLRKSQSPTE TDKKVSSXTN BACU004662/1-1007 CSLKERWSPY QKQTDNLKKN VSTDPLLVTQ CLRKSQSPTE TDKKVSSSTN 501 550 ENSP00000355185/1-1040 IQTSQQALQF TDFVENDKLV GVALRLA--- ---NNSEHIN LPLPENDFSD ENSBTAP00000026896/1-1051 SQTSQQVPQF TGHVNSDKLV GVGLPLAEEL DSQNNPEHRN LPLPENDFSN ENSTTRP00000011371/1-1044 IQTSQQVPQF TELVNNDKLV GFGLPPA--- ---NSPGRIN LTLPQNDFSN bmy_03051T0/1-1176 IQTSQQVPQF TELVNDDKLV GFGLPLAEEL DSQNSPEHXN LTLPENDFSN BACU004662/1-1007 IQTSQQVPQF TELVNDDKLV GFGLPLAEEL DSQNSPEHIN LTLPENDFSN 551 600 ENSP00000355185/1-1040 CEISYSPLQS DEDTHDIDEK PDDSQEQLFF TESSKDGSLE EDDDSCGFFK ENSBTAP00000026896/1-1051 CEISYSPLQS DEETYDTNDK LDDSQQELFF MESSKDGNLE EDDNSSILFK ENSTTRP00000011371/1-1044 CEISYSPLQS DEETYDTDEK LDDSQQELFF TESSKDGSLE EDENSSSLSK bmy_03051T0/1-1176 CEISYSPLQS DEETYDTGEK LDDSQQELFF TESSKDGSL- EDENSSTLSK BACU004662/1-1007 CEISYSPLQS DEETYDTGEK LDDSQQELFF TESSKDGSLE EDENSSTLSK 601 650 ENSP00000355185/1-1040 KRHGPLLKDQ DESCPKVNSF LTRDKYDEGL YRFNSLNDLS QPISQNNEST ENSBTAP00000026896/1-1051 KLYDPLLKDQ -EACPEVDSF LTQDKYNEEL YECNSLNDSS QLTFQNKRIV ENSTTRP00000011371/1-1044 KLHDPLLKDQ EESCPKVDSF LTQDKYDEEL YKCNTLNDSS QLTFQNKSII bmy_03051T0/1-1176 KLHDPLLKBQ EESCPEMDSF LTQDKYDEEL YKCXTLNDSS QLTFQSKSVI BACU004662/1-1007 KLHDPLLKDQ EESCPKMDSF LTQEKYDEEL YKCNTLNDSS QLTFQSKSII 651 700 ENSP00000355185/1-1040 LPYDLACTGG DFVLFPPALA GKLAASVHQA TKAKPDEPEF HSAQSNKQKQ ENSBTAP00000026896/1-1051 SHGHPAYTDD DFMLLPPALA ERFTSPGYQA SKAKPDEPEF RSSQSNKEKQ ENSTTRP00000011371/1-1044 LRDDPAYA-D DFILFPPALA ERFTSPSYQA TKAKPDEPEF HSSQSN--KQ bmy_03051T0/1-1176 LRDDPAYTDD DFILSPPALA ERFTSPSYQA TKAKPDEPEF HSSQSNKEKQ BACU004662/1-1007 LRDDPAYTDD DFILFPPALA ERFTSPSYQA TKAKPDEPEF HSSQSNKEKQ 701 750 ENSP00000355185/1-1040 VIEESSVYNQ VSLPLVKSLM LKPFESQVEG YLSSQPTQNT IRKLSSENLN ENSBTAP00000026896/1-1051 VIEESAVYNQ NSLPLLKSKM SKRFENQGGG CHSFHPTQSK TRELSNKNSN ENSTTRP00000011371/1-1044 VIEESAVYNQ ISLPLLKSKM SKPFESHGGG CHSFQPTQSK TRELSSKNFN bmy_03051T0/1-1176 VIEESAVYNQ ISLPLLKSKM SKPFESQGGG CHSFQPTQSK TRELSSKNFN BACU004662/1-1007 VIEESAVYNQ LSLPLLKSKM SKPFESQRGG CHSFQPTQSK TRELSSKNFS 751 800 ENSP00000355185/1-1040 AKNNTNSACF CRKALEGVPV GKATILNTEN LSSTP-APKY LKILPSGLKY ENSBTAP00000026896/1-1051 AKNKANSTCF CRKALGGMLD NKVPVLNSET FSSTPTVAKP SKMLPSGPKC ENSTTRP00000011371/1-1044 AKHNTNSACF CRKALDGMLD SKVTALNTEI FSSTPTAAKS LKILLSGPKC bmy_03051T0/1-1176 AKHNTNAACF CRRALDGMLD SKVTAVNTAI FSSTPTXAKS LKILPSGPKC BACU004662/1-1007 AKHNTNSACF CRKALDGMLD SKVTALNTAI FSSTPTAAKS LKILPSGPKC 801 850 ENSP00000355185/1-1040 NARHPSTKVM KQMDIGVYFG LPPKRKEEKL LGESALEGIN LNPVPSPNQK ENSBTAP00000026896/1-1051 HATQPSTKVM KQMDIGVYFG LPPKRK-EKL LEESSLEGMN FNTAVSPNEK ENSTTRP00000011371/1-1044 NASQPSTKVM KQMDIGVYFG LPPKRKEEKL LVESALEGMN LNTVVSPNEK bmy_03051T0/1-1176 NASQPSTKVM KQMDIGVYFG LPPKRKEEKL LVESXLEGMN LNTVVSPNEK BACU004662/1-1007 NASQPSTKVM KQMDIGVYFG LPPKRKEEKL LVESALEGMN LNTVVSPNEK 851 900 ENSP00000355185/1-1040 RSSQCKRKAE KSLSDLEFDA STLHESQLSV ELSSERSQRQ KKRCRKSNSL ENSBTAP00000026896/1-1051 RSQQRKRKAE KSLSDLELEA KNLSESQPSV ELSDKGSQRQ KKRLKKSDSL ENSTTRP00000011371/1-1044 RSRQRKRKTE KSLSDLELEA NNLSESQPSV ELSRKRSQHQ RKRLKKSDSL bmy_03051T0/1-1176 RSRQCKRKRE KSLSDLELEA NNLSESQPSV ELSRKRSQHQ RKRLKKSDSL BACU004662/1-1007 RSRQCKRKRE KSLSDLELEA NNLSESQPSV ELSHKRSQHQ RKRLKKSDSL 901 950 ENSP00000355185/1-1040 QEGACQKRSD HLINTESEAV NLSKVKVFTK SAHGGLQRGN KKIPESSNVG ENSBTAP00000026896/1-1051 QEGGHQKNPG HLKKTVPRTV NLSKDKTFIK SAHGRVQREN TKISESSNAG ENSTTRP00000011371/1-1044 QEGVHQKSSG HRNKTEPGTV KLSKDRVFVK SAHGRLQRGN TKIPESSNAG bmy_03051T0/1-1176 QEGVHQKSSG HRNKTEPGTV KLRKDRVFIK SAHGRLQRGN TKIPESSNAG BACU004662/1-1007 QEGVHQKSSG HRNKTEPGTV KLRKDRVFIK SAHGRLQRGN TKIPESSNAG 951 1000 ENSP00000355185/1-1040 GSRKKTCPFY KKIPGTGFTV DAFQYGVVEG CTAYFLTHFH SDHYAGLSKH ENSBTAP00000026896/1-1051 ELRKRTCPFY KKIPGTGFTV DAFQYGWVEG CTAYFLTHFH SDHYAGLSKN ENSTTRP00000011371/1-1044 ELRKRTCPFY KKIPGTGFTV DAFRYGSVEG CTAYFLTHFH SDHYAGLSKN bmy_03051T0/1-1176 ELRKRTCPFY KKIPGAVMIL ----FYLPNG YVILHTGDFR AD-------- BACU004662/1-1007 ELRKRTCPFY KKIPGTGFTV DAFQYGLVEG CTAYFLTHFH SDHYAGLSKN 1001 1050 ENSP00000355185/1-1040 FTFPVYCSEI TGNLLKNKLH VQEQYIHPLP LDTECIVNGV KVVLLDANHC ENSBTAP00000026896/1-1051 FTFPIYCSKI TGNLLKSKLH VQEQYIHPLP TDTECIVNGI KVILLDANHC ENSTTRP00000011371/1-1044 FTFPVYCSEI TGNLLKSKLH VPEQYIHPLP TDTECIVNGV KVVLLDANHC bmy_03051T0/1-1176 -------PTM ERSLLAG--- ---QKVHTLY LDTTTIFPYY R--------- BACU004662/1-1007 FTFPVYCSEI TGNLLKSKLH VQEQYIHPLP TDTECIVNGV KVVLLDANQ- 1051 1100 ENSP00000355185/1-1040 PGAVMILFYL PNGTVILHTG DFRADPSMER SLLADQKVHM LYLDTTYCSP ENSBTAP00000026896/1-1051 PGAVMILFCL PNGHVILHTG DFRADPSMER SLLGCHKVHT LYLDTTYCSP ENSTTRP00000011371/1-1044 PGAVMILFYL PNGYVILHTG DFRADPTMER SLLAGQKVHT LYLDTTYCSP bmy_03051T0/1-1176 ---------- ---------- ---------- ---------- ------YCSP BACU004662/1-1007 ---------- ---------- ---------- ---------- ------YCSP 1101 1150 ENSP00000355185/1-1040 EYTFPSQQEV IRFAINTAFE AVTLNPHALV VCGTYSIGKE KVFLAIADVL ENSBTAP00000026896/1-1051 EYSFPSQQEV IQFAINTAFE TVTLNPRALV VCGTYSIGKE KIFLAIADVL ENSTTRP00000011371/1-1044 EYCFPSQQEV IQFAINTAFE TVTLNPRALV VCGTYSIGKE KVFLAIADVL bmy_03051T0/1-1176 EYSFPSQQEV IQFAINIAFE TVTLNPRALV VCGTYSIGKE KVFLAIADVL BACU004662/1-1007 EYSFPSQQEV IQFAVNTAFE TLTLNPRALV VCGTYSIGKE KVFLAIADVL 1151 1200 ENSP00000355185/1-1040 GSKVGMSQEK YKTLQCLNIP EINSLITTDM CSSLVHLLPM MQINFKGLQS ENSBTAP00000026896/1-1051 GSKVGMSKEK YNTLQCFNIP EVSSFITTDM CNSLVHLLPM MQINFKGLQN ENSTTRP00000011371/1-1044 GSKVGMSKEK YSTLQCFNIP EINSLITTDM CNSLVHLLPM MQINFKGLQN bmy_03051T0/1-1176 GSKVGMSKEK YNTLQCFNIP EINSLITTDX CNSLVHLLPM MQINFKGLQN BACU004662/1-1007 GSKVGMSKEK YNTLQCFNIP EINSLITTDM CNSLVHLLPM MQINFKGLQN 1201 1250 ENSP00000355185/1-1040 HLKKCGGKYN QILAFRPTGW THSNKFTRIA DVIPQTKGNI SIYGIPYSEH ENSBTAP00000026896/1-1051 HLKKCGGKYN QILAFRPTGW THSNKLTSLA DIIPQTKGNI SIYGIPYSEH ENSTTRP00000011371/1-1044 HLKKCGGKYD QILAFR-TGW THSNKLTSMA GIIPQTKGNI SIYGIPYSEH bmy_03051T0/1-1176 HLKKCGGKYD QILAFRPTGW THSNKLTSMA DIIPQTKGNI SIYGIPYSEH BACU004662/1-1007 HLKKYGGKYD QILAFRPTGW THSNKLTSMA DIIPQTKGNI SIYGIPYSEH 1251 1300 ENSP00000355185/1-1040 SSYLEMKRFV QWLKPQKIIP TVNVGTWKSR STMEKYFREW KLEAGY ENSBTAP00000026896/1-1051 SSYLEMKRFV QWLKPQKIIP TVNVGSLKSR RTMEKYFQEW KLEAGY ENSTTRP00000011371/1-1044 SSYLEMKRFV QWLKPQKIIP TVNVGTLRSR RTMEKYFEEW KLEAGY bmy_03051T0/1-1176 SSYPEMKRFV QWLKPQKIIP TVNVGTLRSR RXMEKYFKEW KLEAGY BACU004662/1-1007 SSYPEMKRFV QWLKPQKIIP TVNVGTLRSR RTMEKYFKEW KLEAGY