KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:30:49 2014 Check: 00 .. Name: ENSP00000455068/1-293 Len: 365 Check: 8899 Weight: 1.00 Name: ENSBTAP00000026901/1-291 Len: 365 Check: 981 Weight: 1.00 Name: BACU009247/1-213 Len: 365 Check: 3853 Weight: 1.00 Name: ENSTTRP00000003850/1-291 Len: 365 Check: 9182 Weight: 1.00 Name: bmy_01888T0/1-363 Len: 365 Check: 8125 Weight: 1.00 // 1 50 ENSP00000455068/1-293 MGFPAAALLC ALCCGLLAPA ARAGYSEERC SWRG------ ---------- ENSBTAP00000026901/1-291 --MPTSALLC TLCFCLLAAA ARAGYSEDRC SWRG------ ---------- BACU009247/1-213 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000003850/1-291 --MPPPALLC ALCFGLLATA ARAGYSEDRC SWRG------ ---------- bmy_01888T0/1-363 --MPPPALLC ALCFGLLATA ARAGYSEDRC SWRGRCGASP LGWGRSVPAP 51 100 ENSP00000455068/1-293 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000026901/1-291 ---------- ---------- ---------- ---------- ---------- BACU009247/1-213 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000003850/1-291 ---------- ---------- ---------- ---------- ---------- bmy_01888T0/1-363 NPCPPRPPPS PRTLGLSFLL HKVDAAVDGC GERVQGKRAG RVWTPAARLS 101 150 ENSP00000455068/1-293 ------SGLT QEPGSVGQLA LACAEGAVEW LYPAGALRLT LGGPDPRARP ENSBTAP00000026901/1-291 ------SGLT QEPGSVGQLA LACADGKIEW LYPAGALRLT LGGSEPSAQP BACU009247/1-213 ---------- ---------- ---------- ---------- ---MDPDVDS ENSTTRP00000003850/1-291 ------SGLT QEPGSVGQLA LACAEGGIEW LYPAGALRLT LGGSDPGVRP bmy_01888T0/1-363 TARPVRSGLT QEPGSVGQLA LVCAEGGIEW LYPAGALRLT LGGSDPGARP 151 200 ENSP00000455068/1-293 GIACLRPVRP FAGAQVFAER AGGALELLLA EGPGPAGGRC VRWGPRERRA ENSBTAP00000026901/1-291 GIVCLRPTRP FAGAQVFVER TGGGLELLLA EGQGPAGARC ARWGPRERRA BACU009247/1-213 AL-------- -TGAQVFAER AGGVLELLLA EGPGPAGGRC VRWGPRERRA ENSTTRP00000003850/1-291 GIACLRPARP FAGAQVFAER AGGVLELLLA EGPGPAGGRC VRWGPRERRA bmy_01888T0/1-363 GIACLRPARP FAGAQVFAER AGGVLELLLA EGPGPAGGRC VRWGPRERRA 201 250 ENSP00000455068/1-293 LFLQATPHQD ISRRVAAFRF ELREDGRPEL PPQAHGLGVD GACRPCSDAE ENSBTAP00000026901/1-291 LFLQATPHPD LSRRLASFRF QLREDGRPEL PPQARSLGAD AACRPCSDAE BACU009247/1-213 LFLQATPHPD ISRRVASFRF ELREDGRPEL PPQAHGLSAD GACRPCSDAE ENSTTRP00000003850/1-291 LFLQATPHPD ISRRVASFRF ELREDGRPEL PPQAHGLSAD GACRPCSDAE bmy_01888T0/1-363 LFLQATPHPD ISRRVASFRF ELREDGRPEL PPQAHGLSAD GACRPCSDAE 251 300 ENSP00000455068/1-293 LLLAACTSDF VIHGIIHGVT HDVELQESVI TVVAARVLRQ TPPLFQAGRS ENSBTAP00000026901/1-291 LLLAVCTSDF VIYGTILGVA HNAELQESVI TVAAARVLRQ TLPVFRVGGP BACU009247/1-213 LLLAVCTSDF VIHGTIHGVA HDTELQESVI TVAAARVLRQ TLPLFRVGGP ENSTTRP00000003850/1-291 LLLAVCTSDF VVHGTIHGVA HDTELQESVI TVAAARVLRQ TLPLFRVGGP bmy_01888T0/1-363 LLLAVCTSDF VIHGTIHGVA HDTELQESVI TVAAARVLRQ TLPLFRVGGP 301 350 ENSP00000455068/1-293 GDQGLTSIRT PLRCGVHPGP GTFLFMGWSR FGEARLGCAP RFQEFRRAYE ENSBTAP00000026901/1-291 GGQGQASIRT PLHCGVRPGP GTFLFMGWNR FGEAWLGCAP RLQEFSRAYA BACU009247/1-213 GGQAQASIRT PLHCGVHPGP GTFLFMGWSR FGEAWLGCAP RFQEFSRAYT ENSTTRP00000003850/1-291 GGQAQASIRT PLHCGVHPGP GTFLFMGWSR FGEAWLGCAP RFQEFSRAYT bmy_01888T0/1-363 GGQAQASIRT PLHCGVHPGP GTFLFMGWSR FGEAWLGCAP RFQEFSRAYT 351 400 ENSP00000455068/1-293 AARAAHLHPC EVALH ENSBTAP00000026901/1-291 AAHADHLHPC EVVLD BACU009247/1-213 AAHADHLHPC EVVLD ENSTTRP00000003850/1-291 AAHADHLHPC EVVLD bmy_01888T0/1-363 AAHADHLHSC EVVLD