KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:30:50 2014 Check: 00 .. Name: ENSTTRP00000008982/1-885 Len: 885 Check: 7553 Weight: 1.00 Name: ENSP00000264917/1-885 Len: 885 Check: 2356 Weight: 1.00 Name: bmy_11701T0/1-469 Len: 885 Check: 142 Weight: 1.00 Name: ENSBTAP00000026909/1-780 Len: 885 Check: 6046 Weight: 1.00 // 1 50 ENSTTRP00000008982/1-885 MGCAPSIHVS QSGVIYCRDS DESNSPRQTT SVSQGPAAPL HGLFVQTDAA ENSP00000264917/1-885 MGCAPSIHVS QSGVIYCRDS DESSSPRQTT SVSQGPAAPL PGLFVQTDAA bmy_11701T0/1-469 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000026909/1-780 ---------- ---------- ---------- ---------- ---------- 51 100 ENSTTRP00000008982/1-885 DAIPPSRASW PPGAARGRRA RGELGSGSSA GSTAPAATTC RGRSRHCCSS ENSP00000264917/1-885 DAIPPSRASG PPSVARVRRA RTELGSGSSA GSAAPAATTS RGRRRHCCSS bmy_11701T0/1-469 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000026909/1-780 ---------- ---------- ---------- ---------- ---------- 101 150 ENSTTRP00000008982/1-885 AEAETQTSYT SVKQVSSAEV RIGPMRLTQD PIQVLLIFAK EDSQSDGFWW ENSP00000264917/1-885 AEAETQTCYT SVKQVSSAEV RIGPMRLTQD PIQVLLIFAK EDSQSDGFWW bmy_11701T0/1-469 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000026909/1-780 -----SDISR HINQVSSAEV RIGPMRLTQD PIQVLLIFAK EDSQSDGFWW 151 200 ENSTTRP00000008982/1-885 ACDRAGYRCN IARTPESALE CFLDKHHEII VIDHRQTRNF DAEAVCRSIR ENSP00000264917/1-885 ACDRAGYRCN IARTPESALE CFLDKHHEII VIDHRQTQNF DAEAVCRSIR bmy_11701T0/1-469 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000026909/1-780 ACDRAGYSCN IARTPESALE CFLDKHHEII VIDHRQTQNF DAEAVCRSIR 201 250 ENSTTRP00000008982/1-885 ATNPSEHTVI LAVVSQASGD YEEASVLPLL HAGFNRRFME NSSIIACYNE ENSP00000264917/1-885 ATNPSEHTVI LAVVSRVSDD HEEASVLPLL HAGFNRRFME NSSIIACYNE bmy_11701T0/1-469 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000026909/1-780 ATNPSEHAVI LAVVSQASGN YEEASVLPLL HAGFNRRFME NSSIIACYNE 251 300 ENSTTRP00000008982/1-885 LIQIEHGEVR SQFKLXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000264917/1-885 LIQIEHGEVR SQFKLRACNS VFTALDHCHE AIEITSDDHV IQYVNPAFER bmy_11701T0/1-469 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000026909/1-780 LIQIEHGEVL SQFKLRACNS VFTALDHCHE AIEITSDDHV IQYVNPAFER 301 350 ENSTTRP00000008982/1-885 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXE WQGVYYARRK ENSP00000264917/1-885 MMGYHKGELL GKELADLPKS DKNRADLLDT INTCIKKGKE WQGVYYARRK bmy_11701T0/1-469 MMGYHKGELL GKELAELPKS DKNRADLLDT INTCIKKG-- ---------- ENSBTAP00000026909/1-780 MMGYHKGELL GKELAELPKS DKNRADLLDT INTCIKKGKE WQGVYYARRK 351 400 ENSTTRP00000008982/1-885 SGDSIQQHVK ITPVIGQGGX XXXXXXXXXX XXXXXXXXXI HKVHRDSGDN ENSP00000264917/1-885 SGDSIQQHVK ITPVIGQGGK IRHFVSLKKL CCTTDNNKQI HKIHRDSGDN bmy_11701T0/1-469 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000026909/1-780 SGDSIQQHVK ITPVIGQGGK IRHFVSLKKL CCSTDKNKQL FRVHHHTPLE 401 450 ENSTTRP00000008982/1-885 SQTESHSFRH KNRRKESIDV KSISSRGSDA PSLQNRRYPS MARIHSMTIE ENSP00000264917/1-885 SQTEPHSFRY KNRRKESIDV KSISSRGSDA PSLQNRRYPS MARIHSMTIE bmy_11701T0/1-469 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000026909/1-780 NSEQRNSLQE KCSVKQSLVI LCIIIPGSPA PSLQNRRYPS MARIHSMTIE 451 500 ENSTTRP00000008982/1-885 APITKVINII NAAQENSPVT VAEALDRVLE ILRTTELYSP QLGTKDEDPH ENSP00000264917/1-885 APITKVINII NAAQENSPVT VAEALDRVLE ILRTTELYSP QLGTKDEDPH bmy_11701T0/1-469 ----KVINII NAAQENSPVT VAEALDRVLE ILRTTELYSP QLGTKDEDPH ENSBTAP00000026909/1-780 APITKVINII NAAQENSPVT VAEALDRVLE ILRTTELYSP QLGTKDEDPH 501 550 ENSTTRP00000008982/1-885 TSDLVGGLMT DGLRRLSGNE YVFTKNVPQS HSHLGMPVTI NDVPPSIAQL ENSP00000264917/1-885 TSDLVGGLMT DGLRRLSGNE YVFTKNVHQS HSHLAMPITI NDVPPCISQL bmy_11701T0/1-469 TSDLVGGLMT DGLRRLSGNE YVFTKNVPQS HSHLGMPVTI NDVPPSIAQL ENSBTAP00000026909/1-780 TSDLVGGLMT DGLRRLSGNE YVFTKNVHQS HSHLAMPGTI TDVPPSVAQL 551 600 ENSTTRP00000008982/1-885 LDNEESWEFN IFELEAVTHK RPLVYLGLKV FSRFGVCEFL HCSETTLRAW ENSP00000264917/1-885 LDNEESWDFN IFELEAITHK RPLVYLGLKV FSRFGVCEFL NCSETTLRAW bmy_11701T0/1-469 LDNEESWEFN IFELEAVTHK RPLVYLGLKV FSRFGVCEFL HCSETTLRAW ENSBTAP00000026909/1-780 LDNEESWEFN IFELEAVTHK RPLVYLGLKV FSRFGVCEFL HCSETTLRAW 601 650 ENSTTRP00000008982/1-885 LQVIESNYHS SNAYHNSTHA ADVLHATAFF LGKERVKGSL DQLDEVAALI ENSP00000264917/1-885 FQVIEANYHS SNAYHNSTHA ADVLHATAFF LGKERVKGSL DQLDEVAALI bmy_11701T0/1-469 LQVIESNYHS SNAYHNSTHA ADVLHATAFF LGKERVKGSL DQLDEVAALI ENSBTAP00000026909/1-780 LQVIEANYHS SNAYHNSTHA ADVLHATAFF LGKERVKGSL DQLDEVAALI 651 700 ENSTTRP00000008982/1-885 AATVHDVDHP GRTNSFLCNA GSELAVLYND TAVLESHHTA LAFQLTVKDS ENSP00000264917/1-885 AATVHDVDHP GRTNSFLCNA GSELAVLYND TAVLESHHTA LAFQLTVKDT bmy_11701T0/1-469 AATVHDVDHP GRTNSFLCNA GSELAVLYND TAVLESHHTA LAFQLTVKDS ENSBTAP00000026909/1-780 AATVHDVDHP GRTNSFLCNA GSELAVLYND TAVLESHHTA LAFQLTVKDS 701 750 ENSTTRP00000008982/1-885 KCNIFKDIDR NHYRTLRQAI IDMVLATEMT KHFEHVNKFV NSINKPMAAE ENSP00000264917/1-885 KCNIFKNIDR NHYRTLRQAI IDMVLATEMT KHFEHVNKFV NSINKPMAAE bmy_11701T0/1-469 KCNIFKNIDR NHYRTLRQAI IDMVLATEMT KHFEHVNKFV NSINKPMAAE ENSBTAP00000026909/1-780 KCNIFKNIDR NHYRTLRQAI IDMVLATEMT KHFEHVNKFV NSINKPMAAE 751 800 ENSTTRP00000008982/1-885 IEGSDCECNP TGKNFPENQI LIKRMMIKCA DVANPCRPLD LCIEWAGRIS ENSP00000264917/1-885 IEGSDCECNP AGKNFPENQI LIKRMMIKCA DVANPCRPLD LCIEWAGRIS bmy_11701T0/1-469 IEGSDCECNP IGKNFPENQI LIKRMMIKCA DVANPCRPLD LCIEWAGRIS ENSBTAP00000026909/1-780 IDGSDCECSP PGKNFPENQT LIKRMMIKCA DVANPCRPLD LCIEWAGRIS 801 850 ENSTTRP00000008982/1-885 EEYFAQTDEE KRQGLPVVMP VFDRNTCSIP KSQISFIDYF ITDMFDAWDA ENSP00000264917/1-885 EEYFAQTDEE KRQGLPVVMP VFDRNTCSIP KSQISFIDYF ITDMFDAWDA bmy_11701T0/1-469 EEYFAQTDEE KRQGLPVVMP VFDRNTCSIP KSQISFIDYF ITDMFDAWDA ENSBTAP00000026909/1-780 EEYFAQTDEE KRQGLPVVMP VFDRNTCSIP KSQISFIDYF ITDMFDAWDA 851 900 ENSTTRP00000008982/1-885 FAHLPTLMQH LADNYKHWKT LDDLKCKSLR LPSDS ENSP00000264917/1-885 FAHLPALMQH LADNYKHWKT LDDLKCKSLR LPSDS bmy_11701T0/1-469 FAHLPTLMQH LADNYKHWKT LDDLKCKSLR LPSDS ENSBTAP00000026909/1-780 FAHLPTLMQH LADNYKHWKT LDDLKCKSLR LPSDS