KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:30:51 2014 Check: 00 .. Name: ENSP00000219069/1-683 Len: 712 Check: 3298 Weight: 1.00 Name: ENSBTAP00000026911/1-687 Len: 712 Check: 3182 Weight: 1.00 Name: BACU009172/1-480 Len: 712 Check: 3282 Weight: 1.00 Name: bmy_02762T0/1-531 Len: 712 Check: 8764 Weight: 1.00 Name: ENSTTRP00000011046/1-565 Len: 712 Check: 771 Weight: 1.00 // 1 50 ENSP00000219069/1-683 --MASGPGSQ EREGLLIVKL EEDCAWSQEL PPPDPGPSPE ASHLRFRRFR ENSBTAP00000026911/1-687 LKMASGPGFQ DREGLLIVKL EEDSAWSQEL PQPDPGPSPE ASHLRFRRFR BACU009172/1-480 ---------- ---------- ---------- ---------- ---------- bmy_02762T0/1-531 --MASGPGFQ DREGLLIVKL EEDFAWSQEL PPTDPGPSPE ASHQRFRRFR ENSTTRP00000011046/1-565 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000219069/1-683 FQEAAGPREA LSRLQELCHG WLRPEMRTKE QILELLVLEQ FLTILPQEIQ ENSBTAP00000026911/1-687 FQEAAGPREA LSRLQELCHG WLQPEMRTKE QILELLVLEQ FLTILPQEIQ BACU009172/1-480 ---------- ---------- ---------- ---------- ---------- bmy_02762T0/1-531 FQEAAGPREA LSRLQELCHG WLRPEMRTKE QILEVLVLEQ FLTILPQEIQ ENSTTRP00000011046/1-565 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000219069/1-683 SRVQELHPES GEEAVTLVED MQRELGRLRQ QVTNHGRGTE VLLEEPLPLE ENSBTAP00000026911/1-687 SRVQELHPES GEEAVTLVED MQKELGRLRQ KVTNRGRGTE MLLEEPLPLE BACU009172/1-480 ---------- ---------- ---------- ---------- ---------- bmy_02762T0/1-531 SRVQELHPES GEEAVTLVED MQKELGRLRQ QVTNHGRGTE VLLEETLPLE ENSTTRP00000011046/1-565 ---------- ---------- -QKELGRLRQ QVTNHGRGTE VLLEEPLPLE 151 200 ENSP00000219069/1-683 TARESPSFKL EPMETERSPG PRLQELLGPS PQRDPQAVKE RALSAPWLSL ENSBTAP00000026911/1-687 TAQESPSFKL EPMETERSPG RRLQELLGPG PKRDPQTVKE RALSAPWLSL BACU009172/1-480 ---------- ---------- ---------- ---------- ---------- bmy_02762T0/1-531 TARESPSFKL EPMETERSPG RRLQELLGPS PKRDPQTVKE RALSAPWLSL ENSTTRP00000011046/1-565 TARESPSFKL EPMETERSPG RRLQELLGPS PKRDPQTVKE RALSAPWLSL 201 250 ENSP00000219069/1-683 FPPEGNMEDK EMTGP----- ---------- ---------- QLPESLEDVA ENSBTAP00000026911/1-687 FPPEGNMEDK ELTGP----- ---------- ---------- QLPESLEDVA BACU009172/1-480 ------MEDK ELTGP----- ---------- ---------- QLPESLEDVA bmy_02762T0/1-531 FPPEGNMEDK ELTGPQVMWK FPLSPRSCSC GGPKGDLVLF QLPESLEDVA ENSTTRP00000011046/1-565 FPPEGNMEDK ELTGP----- ---------- ---------- QLPESLEDVA 251 300 ENSP00000219069/1-683 MYISQEEWGH QDPSKRALSR DTVQESYENV DSLESHIPSQ EVPGTQVGQG ENSBTAP00000026911/1-687 MYISQEEWGR QHPSKRALSR DTVQESYENV DSLESQVPSQ EALSTQVEHG BACU009172/1-480 MYISQEEWGH QHPSKRALSQ DTVQESYENV DSLESQVPSQ EALSTQVEQE bmy_02762T0/1-531 MYISQEEWGH QHPSKRALSQ DTVQESYENV DSLESQVPSQ EALSTQVEQE ENSTTRP00000011046/1-565 MYISQEEWGH QHPSKRALSQ DTVQESYENV DSLESQVPSQ EALSTQVEQE 301 350 ENSP00000219069/1-683 GKLWDPSVQS CKEGLSPRGP APGEEKFENL -EGVPSVCSE NIHPQVLLPD ENSBTAP00000026911/1-687 GKPWHPSVQT CKEGLSSRTP APGEEKFENQ EECAQSASPE SIHCQALLPG BACU009172/1-480 GKPWDPSVQT CKEGLSPRSP APGEEKFDNL EESAQSVCPE SIHPRALLPG bmy_02762T0/1-531 GKPWDPSVQT CKEGLSPRSP APGEEKFDNL EESAQSVCPE SIHPRALLPG ENSTTRP00000011046/1-565 GKPWDPSVQT CKEGLSRRSP APGEEKFDNL EESAQSVCPE SIHPRALLPG 351 400 ENSP00000219069/1-683 QARGEVPWSP ELGRPHDRSQ GDWAPPPEGG MEQALAGASS GRELGRPKEL ENSBTAP00000026911/1-687 QARGEVPWSP EQGRPRDRAE KLWEPPTEDR MEQSLVGATS CKKLGRPTEL BACU009172/1-480 QAGGEVPWSP EQGRPRDRAE EHWEPPPEVR MEQSLVGATS CRELGRPKEL bmy_02762T0/1-531 QAGGEVPWSP EQGRPRDRAE EHWEPPPEVR MEQSLVGATS CRELGRPKEL ENSTTRP00000011046/1-565 QAGGEVPWSP EQGRPHDRAE EHWEPAPEVR MEQSLVGATS CRELGRPKEL 401 450 ENSP00000219069/1-683 QPKKLHLCPL CGKNFSNNSN LIRHQRIHAA ERLCMGVDCT EIFGGNPRFL ENSBTAP00000026911/1-687 QPKKLHLCPL CGKNFSNNSN LIRHQRIHAA ERLCMGVECA EIFGGNPHFL BACU009172/1-480 RPKKLHLCPL CGKNFSNNSN LIRHQRIHAA ERLCMGVGRA EIFGRNPHFL bmy_02762T0/1-531 QPKKLHLCPL CGKNFSNNSN LIRHQRIHAA ERLCMGVGRA EIFGGNPHFL ENSTTRP00000011046/1-565 QPKKLHLCPL CGKNFSNNSN LIRHQRIHAA ERLCMGVGCA EIFGGNPHFL 451 500 ENSP00000219069/1-683 SLHRAHLGEE AHKCLECGKC FSQNTHLTRH QRTHTGEKPY QCNICGKCFS ENSBTAP00000026911/1-687 SLHRAHLGEE AHKCLECGKS FSQNTHLTRH QRTHTGEKPY QCNVCGKSFS BACU009172/1-480 SLHRAHLGEE GHKCPDCGKS FSQNTHLTRH QRTHTGEKPY QCNECGKSFS bmy_02762T0/1-531 SLHRAHLGEE AHKCLECGKS FSQNTHLTRH QRTHTGEKPY QCNECGKSFS ENSTTRP00000011046/1-565 SLHRAHLGEE AHKCLECGKS FSQNTHLTRH RRTHTGEKPY QCNECGKSFS 501 550 ENSP00000219069/1-683 CNSNLHRHQR THTGEKPYKC PECGEIFAHS SNLLRHQRIH TGERPYKCPE ENSBTAP00000026911/1-687 CNSNLHRHQR THTGEKPYKC PECGEIFAHS SNLLRHQRIH TGERPYKCAE BACU009172/1-480 CNSNLHRHQR THTGEKPYKC PECGEIFAHS SNLLRHQRIH TGERPYKCSE bmy_02762T0/1-531 CNSNLHRHQR THTGEKPYKC PECGEIFAHS SNL------- ---------- ENSTTRP00000011046/1-565 CNSNLHRHQR THTGEKPYKC PECGEIFAHS SNLLRHQRIH TGERPYKCSE 551 600 ENSP00000219069/1-683 CGKSFSRSSH LVIHERTHER ERLYPFSECG EAVSDSTPFL TNHGAH-KAE ENSBTAP00000026911/1-687 CGKSFSRSSH LVIHERTHEK ERLYPFSECG EAVRDSTLFL TNPGTHPKAE BACU009172/1-480 CGKSFSRSSH LVIHERTHEK ERLYPFSECG EAVSDSTLFL ANHGTH-KAE bmy_02762T0/1-531 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000011046/1-565 CGKSFSRSSH LVIHERTHEK ERLYPFSECG EAVSDSTLFL ANHGTH-KAE 601 650 ENSP00000219069/1-683 KKLFECLTCG KSFRQGMHLT RHQRTHTGEK PYKCTLCGEN FSHRSNLIRH ENSBTAP00000026911/1-687 KKLFQCLTCG KSFRQGMHLT RHQRTHTGEK PYKCNLCGEN FSHRSNLIRH BACU009172/1-480 KKLFQCLTCG KSFRQGMHLT RHQRTHTGEK PYKCTLCGEN FSHRSNLIRH bmy_02762T0/1-531 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000011046/1-565 KKLFQCLTCG KSFQQGMHLT RHQRTHTGEK PYKCTLCGEN FSHRSNLIRH 651 700 ENSP00000219069/1-683 QRIHTGEKPY TCHECGDSFS HSSNRIRHLR THTGERPYKC SECGESFSRS ENSBTAP00000026911/1-687 QRIHTGEKPY TCHECGDSFS HSSNRIRHLR THTGEKPYKC SECGESFSRS BACU009172/1-480 QRIHTGEKPY TCHECGDSFS HSSNRIRHLR THTGERPYKC SECGESFSRS bmy_02762T0/1-531 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000011046/1-565 QRIHTGEKPY TCHECGDSFS HSSNRIRHLR THTGERPYKC SECGESFSRS 701 750 ENSP00000219069/1-683 SRLMSHQRTH TG ENSBTAP00000026911/1-687 SRLMSHQRTH TG BACU009172/1-480 SRLMSHQRTH TG bmy_02762T0/1-531 ---------- -- ENSTTRP00000011046/1-565 SRLMSHQRTH TG