KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:30:51 2014 Check: 00 .. Name: ENSBTAP00000026917/1-459 Len: 459 Check: 7521 Weight: 1.00 Name: ENSP00000296679/1-459 Len: 459 Check: 9565 Weight: 1.00 Name: bmy_11700T0/1-360 Len: 459 Check: 2336 Weight: 1.00 Name: BACU006174/1-389 Len: 459 Check: 819 Weight: 1.00 Name: ENSTTRP00000008988/1-459 Len: 459 Check: 8987 Weight: 1.00 // 1 50 ENSBTAP00000026917/1-459 MLRWLIGGGR EPQGLAEKSP LQTIGEEQTQ NPYTELLVLK AHHDIVRYLV ENSP00000296679/1-459 MLRWLIGGGR EPQGLAEKSP LQTIGEEQTQ NPYTELLVLK AHHDIVRFLV bmy_11700T0/1-360 ---MVIQGTS T--------- ---------- ---------- -------YVI BACU006174/1-389 MLRWLIGGGR EPQGLAE--- --TIGEEQTQ NPYTELLVLK AHHDIVRFLV ENSTTRP00000008988/1-459 MLRWLIGGGR EPQGLAEQSP LQTIGEEQTQ NPYTELLVLK AHHDIVRFLV 51 100 ENSBTAP00000026917/1-459 QLDDSRFASA GDDGTVVVWN AQTGEKLLEL NGHTQKITAI ITLPCLETCE ENSP00000296679/1-459 QLDDYRFASA GDDGIVVVWN AQTGEKLLEL NGHTQKITAI ITFPSLESCE bmy_11700T0/1-360 SL--YPLG-- ---------- ---------- ---------- ---------- BACU006174/1-389 QLDDYRFASA GDDGIVVVWN AQ-------- ---------- ---------- ENSTTRP00000008988/1-459 QLDDYRFASA GDDGIVVVWN AQTGEKLLEL NGHTQKITAI ITFPSLEAYE 101 150 ENSBTAP00000026917/1-459 EKNQLILTAS ADRTVIEWDC DTGRQVQKVS CFQSTVKCLA VIQRLDVWLS ENSP00000296679/1-459 EKNQLILTAS ADRTVIVWDG DTTRQVQRIS CFQSTVKCLT VLQRLDVWLS bmy_11700T0/1-360 ---------- ------VWDC DTGRQVQKVS CFQSTVKCLA LLQRLDVWLS BACU006174/1-389 ---------- ---------- ---------- -------CLA LLQRLDVWLS ENSTTRP00000008988/1-459 EKNQLILTAS ADRTVIVWDC DTGRQVQKVS CFQSTVKCLA LLQRLDVWLS 151 200 ENSBTAP00000026917/1-459 GGNDLCVWNR KLDLLCQTSH LSDTGITALI EIPKNCVVAA VGKELIIFRL ENSP00000296679/1-459 GGNDLCVWNR KLDLLCKTSH LSDTGISALV EIPKNCVVAA VGKELIIFRL bmy_11700T0/1-360 GGNDLCVWNR KLDLLCKTSH LSDTGISALI EIPKNCVVAA VGKELIIFRL BACU006174/1-389 GGNDLCVWNR KLDLLCKTSH LSDTGISALI EIPKNCVVAA VGKELIIFRL ENSTTRP00000008988/1-459 GGNDLCVWNR KLDLLCKTSH LSDTGISALI EIPKNCVVAA VGKELIIFRL 201 250 ENSBTAP00000026917/1-459 VAATEGSLGW DILEVKRLLD HQDNILSLVN VNDVSFVSGS HVGELIIWDT ENSP00000296679/1-459 VAPTEGSLEW DILEVKRLLD HQDNILSLIN VNDLSFVTGS HVGELIIWDA bmy_11700T0/1-360 VAPTEGSLGW DILQVKRLLD HQDNILSLVN VNDLSFVTGS HVGELIIWDI BACU006174/1-389 VAPTEGSLGW DILQVKRLLD HQDNILSLVN INDLSFVTGS HVGELIIWDI ENSTTRP00000008988/1-459 VAPTEGSLGW DILQVKRLLD HQDNILSLVN VNDLSFVTGS HVGELIIWDI 251 300 ENSBTAP00000026917/1-459 LGWTVQACER NFWDPSPQLD AQREIKLCQK PNDVSIHHLT WDEENVFVAV ENSP00000296679/1-459 LDWTMQAYER NFWDPSPQLD TQQEIKLCQK SNDISIHHFT CDEENVFAAV bmy_11700T0/1-360 LDWTVQACER NFWDPSPQLG TQQEIKLCQK PNDVSIHHFT WDEENVFVAV BACU006174/1-389 LDWTVQACER NFWDPSPQLD TQQEIKLCQK PNDVSIHHFT WDEENVFVAV ENSTTRP00000008988/1-459 LDWTVQACER NFWDPSPQLD TQQEIKLCQK PNDVSIHHFT WDEENVFVAV 301 350 ENSBTAP00000026917/1-459 GRGLYVYNLP MKRVIACQKA AHDSSVLHVA KLPNRQVISC SEDGSVRIWE ENSP00000296679/1-459 GRGLYVYSLQ MKRVIACQKT AHDSNVLHVA RLPNRQLISC SEDGSVRIWE bmy_11700T0/1-360 GRGLYVYNLQ MKRVIACQKT AHDSNVLHIA KLPNRQLISC SEDGSVRIWE BACU006174/1-389 GRGLYVYNLQ MKRVIACQKT AHDSNVLHVA KLPNRQLISC SEDGSVRIWE ENSTTRP00000008988/1-459 GRGLYVYNLQ MKRVIACQKT AHDSNVLHVA KLPNRQLISC SEDGSVRIWE 351 400 ENSBTAP00000026917/1-459 LREKQQLSVE PAPTGFFNMW GFGRVNKQAS HPAKKQQENA TSCSLELIGD ENSP00000296679/1-459 LREKQQLAAE PVPTGFFNMW GFGRVSKQAS QPVKKQQENA TSCSLELIGD bmy_11700T0/1-360 LREKQQLAAE PVPTGFFNMW GFGRVNKQAS HPVKKQQENG TSCSLELIGD BACU006174/1-389 LREKQQLAAE PVPTGFFNLW GFGRVNKQAS HPAKKQQENS TSCSLELIGD ENSTTRP00000008988/1-459 LREKQQLAAE PVPTGFFNMW GFGRVNKQAS HPVKKQQENA TSCSLELIGD 401 450 ENSBTAP00000026917/1-459 LIGHSSSVEM FLYFEDHGLV TCSADHLIIL WKNGERESGL RSLKLFQKLE ENSP00000296679/1-459 LIGHSSSVEM FLYFEDHGLV TCSADHLIIL WKNGERESGL RSLRLFQKLE bmy_11700T0/1-360 LIGHSSSVEM FLYFEDHGLV TCSADHLIIL WKNGERESGL RSLKLFQKLE BACU006174/1-389 LIGHSSSVEM FLYFEDHGLV TCSADHLIIL WKNGERESGL RSLKLFQKLE ENSTTRP00000008988/1-459 LIGHSSSVEM FLYFEDHGLV TCSADHLIIL WKNGERESGL RSLKLFQKLE 451 500 ENSBTAP00000026917/1-459 ENGDLYLSV ENSP00000296679/1-459 ENGDLYLAV bmy_11700T0/1-360 ENGDLYLAV BACU006174/1-389 ENGDLYLAV ENSTTRP00000008988/1-459 ENGDLYLAV