KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:30:52 2014 Check: 00 .. Name: ENSBTAP00000026918/1-404 Len: 467 Check: 4643 Weight: 1.00 Name: ENSP00000311687/1-466 Len: 467 Check: 8939 Weight: 1.00 Name: ENSTTRP00000012437/1-379 Len: 467 Check: 7124 Weight: 1.00 Name: bmy_14763T0/1-426 Len: 467 Check: 3828 Weight: 1.00 Name: BACU020042/1-382 Len: 467 Check: 5145 Weight: 1.00 // 1 50 ENSBTAP00000026918/1-404 ---MSPPDSL TML------- ---------- ---------- ---------- ENSP00000311687/1-466 MPGDSSPGTL PLWDASLSPP LGPDPGGFSR ASHAGDKSRP PAPELGSPGA ENSTTRP00000012437/1-379 ---------- ---------- ---------- ---------- ---------- bmy_14763T0/1-426 -GWAAPPRGP SPSGARHSPH PRVRPRLLLA RRPRGDKSQP PAPEPGRRGT BACU020042/1-382 ---------- ---------- ---------- ---------- ---------- 51 100 ENSBTAP00000026918/1-404 -FP------- ---------- ----GSLISL YCSSQKVLCQ IISDLQPEVP ENSP00000311687/1-466 VRPRVGSCAP GPMELRVSNT SCENGSLLHL YCSSQEVLCQ IVNDLSPEVP ENSTTRP00000012437/1-379 ---------- ---------- ---------- ----QQVLCQ IVGDLSPQVP bmy_14763T0/1-426 VRP------- ---------- ----MELRAS NASCENVLCR IVGDLSPEVP BACU020042/1-382 ---------- ---------- ---------- ----QQVLCR IVGDLSPEVL 101 150 ENSBTAP00000026918/1-404 SNVTSNSWQE RFRKNYSFYV GLGLAILSSF LVGSSIILKK KGLQRLVASG ENSP00000311687/1-466 SNATFHSWQE RIRQNYGFYI GLGLAFLSSF LIGSSVILKK KGLLRLVATG ENSTTRP00000012437/1-379 SSVISSSWQ- -IRQNYSFYV GLGLAILSSF LIGSSVILKK KGLQRLVASG bmy_14763T0/1-426 SRVISNSWQE RFRQNYSFYV GLGLAILSSF LIGTSVILKK KGLQRLVASG BACU020042/1-382 SSAISNSWQE RFRQNYSFYV GLGLALLSSF LIGTSVILKK KGLQRLVASG 151 200 ENSBTAP00000026918/1-404 ATRAVDGGYG YLKDSMWWAG FLTMAAGEVA NFGAYAFAPA TVVTPLGALS ENSP00000311687/1-466 ATRAVDGGFG YLKDAMWWAG FLTMAAGEVA NFGAYAFAPA TVVTPLGALS ENSTTRP00000012437/1-379 ATRAVDGGYG YLKDAMWWAG FLTMAAGEVA NFGAYAFAPA TVVTPLGALS bmy_14763T0/1-426 ATRAV----- ---------- ----AAGEVA NFGAYAFAPA TVVTPLGALS BACU020042/1-382 ATRAVDGGYG YLKDTMWWAG FLTMAAGEIA NFGAYAFAPA TVVTPLGALS 201 250 ENSBTAP00000026918/1-404 ILISAIFSSY FLGESLNLLG KLGCVICVAG STVMVIHAPE EEKISTIMEM ENSP00000311687/1-466 VLISAILSSY FLRESLNLLG KLGCVICVAG STVMVIHAPE EEKVTTIMEM ENSTTRP00000012437/1-379 ILISTILSSY FLGESLNLLG KLGCVICVAG STVMVIHAPE EEKITTIVEM bmy_14763T0/1-426 ILISAVLSSY FLGESLNLLG KLGCVVCVAG STVMVLHAPE EEKITTVMEM BACU020042/1-382 ILISALLSSY FLGDSLNLLG KLGCAVCVAG STVMVIHAPE EETITTVMEM 251 300 ENSBTAP00000026918/1-404 AAKMKDTGYI VFAVFLLVSC LILIFVVAPR YGQRNILIYI TICSVIGAFS ENSP00000311687/1-466 ASKMKDTGFI VFAVLLLVSC LILIFVIAPR YGQRNILIYI IICSVIGAFS ENSTTRP00000012437/1-379 AAKMKDTGYI VFAVLLLVSC LILIFVIAPR YGQRNILIYI VICSVIGAFS bmy_14763T0/1-426 AAKMKDTGYI VFAVLLLVSC LILIFVIAPR FGQRNILIYI IICSVIGTFS BACU020042/1-382 AAKMKDTGYI VFAVLLLVSC LILIFVIAPR YGQRNILIYI VICSVIGTFS 301 350 ENSBTAP00000026918/1-404 VSSSKGLGIT IRNFFQGLPV VRHPLPYILS LMLALSISTQ VNFLNRALDI ENSP00000311687/1-466 VAAVKGLGIT IKNFFQGLPV VRHPLPYILS LILALSLSTQ VNFLNRALDI ENSTTRP00000012437/1-379 VTAVKGLGIT IKNFFQGLPV VRHPLPYILS LVLALSLSTQ VNFLNKALDI bmy_14763T0/1-426 VSAVKGLGIT IKNFFQGLPV VRHPLPYILS LVLALSLSTQ VNFLNKALDI BACU020042/1-382 VSAVKGLGIT IKNLFQGLPV VRHPLPYILS LVLALSLSTQ VNFLNKALDI 351 400 ENSBTAP00000026918/1-404 FNTSLVFPIY YVFFTTTVMT SSIILFKEWY RMSAVDIVGT LSGFVTIILG ENSP00000311687/1-466 FNTSLVFPIY YVFFTTVVVT SSIILFKEWY SMSAVDIAGT LSGFVTIILG ENSTTRP00000012437/1-379 FNTSLVFPIY YVFFTSMVVT SVVVLFKEWH SMSAVDIVGT LSGFVTIILG bmy_14763T0/1-426 FNTSLVFPIY YVFFTLMVVT SSIVLFKEWY SMSAVDIVGT LSGFVTIILG BACU020042/1-382 FNTSLVFPIY YVFFTSLVVT SSIVLFKEWY SMSAVDIAGT LSGFVTIILG 401 450 ENSBTAP00000026918/1-404 VFMLHAFKDL DISRSSLPHM HKNPPATPAP EPSVIRLGDK NVLVDNMELS ENSP00000311687/1-466 VFMLHAFKDL DISCASLPHM HKNPPPSPAP EPTVIRLEDK NVLVDNIELA ENSTTRP00000012437/1-379 VFTLHAFKDL DVSRTSLPHM HKNPTPPPAP EPSIVRLEDK NVLVDNIELS bmy_14763T0/1-426 VFMLHAFKDL DISQTSLPHM HKNPTPAPTP EPSIIRLEDK NVLVDNTELS BACU020042/1-382 VFMLHAFKDL DISHTSLPHM HKNPTPTPAP EPSIIRLEDK NVLVDNIELS 451 500 ENSBTAP00000026918/1-404 STP-SPEEKP KVFIAHS ENSP00000311687/1-466 STS-SPEEKP KVFIIHS ENSTTRP00000012437/1-379 SAP-SPKK-P EVFIIHS bmy_14763T0/1-426 STPSSPEKKP KVFIIHS BACU020042/1-382 STA-SPEKKP EVFIIHS