KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:30:52 2014 Check: 00 .. Name: ENSP00000332674/1-803 Len: 894 Check: 2538 Weight: 1.00 Name: ENSBTAP00000026919/1-804 Len: 894 Check: 2997 Weight: 1.00 Name: ENSTTRP00000006220/1-803 Len: 894 Check: 4655 Weight: 1.00 Name: bmy_13680T0/1-873 Len: 894 Check: 9273 Weight: 1.00 Name: BACU006380/1-769 Len: 894 Check: 9351 Weight: 1.00 // 1 50 ENSP00000332674/1-803 ---------- ---------- ---------- MITLTELKCL ADAQSSYHIL ENSBTAP00000026919/1-804 ---------- ---------- ---------- MITLTELKCL ADAQSCYHIL ENSTTRP00000006220/1-803 ---------- ---------- ---------- MITLTELKCL ADAQSSYHIL bmy_13680T0/1-873 MKTITEMVVW ILLVNNFLND LVSVLLQGEV MITLTELKCL ADAQSSYHIL BACU006380/1-769 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000332674/1-803 KPWWDVFWYY ITLIMLLVAV LAGALQLTQS RVLCCLPCKV EFDNHCAVPW ENSBTAP00000026919/1-804 KPWWDVFWYY ITLIMLLVAV LAGALQLTQS RVLCCLPCKV EFDNHCAVPW ENSTTRP00000006220/1-803 KPWWDVFWYY ITLIMLLVAV LAGALQLTQS RVLCCLPCKV EFDNHCAVPW bmy_13680T0/1-873 KPWWDVFWYY ITLIMLLVAV LAGALQLTQS RVLCCLPCKV EFDNHCAVPW BACU006380/1-769 ---------- ----MLLVAV LAGALQLTQS RVLCCLPCKV EFDNHCAVPW 101 150 ENSP00000332674/1-803 DILKASMNTS SNPGTPLPLP LRIQNDLHRQ QYSYIDAVCY EKQLHWFAKF ENSBTAP00000026919/1-804 DILKASVNAS SDAGMPLPLP LRIQNDLHRQ QYSYIDAVCY EKQLHWFAKF ENSTTRP00000006220/1-803 DILKASVNTS SDPGTPLPLP LRIQNDLHRQ QYSYIDAVCY EKQLHWFAKF bmy_13680T0/1-873 DVLKASVNTS SDPGTPLPLP LRIQNDLHRQ QYSYIDAVCY EKQLHWFAKF BACU006380/1-769 DVLKASVNTS SDPGMPLPPP LRIQNDLHRQ QYSYIDAVCY EKQLHWFAKF 151 200 ENSP00000332674/1-803 FPYLVLLHTL IFAACSNFWL HYPSTSSRLE HFVAILHKCF DSPWTTRALS ENSBTAP00000026919/1-804 FPYLVLLHTL IFAACSNFWL HYPSTSSRLE HFVAILHKCF DSPWTTRALS ENSTTRP00000006220/1-803 FPYLVLLHTL IFAACSNFWL HYPSTSSRLE HFVAILHKCF DSPWTTRALS bmy_13680T0/1-873 FPYLVLLHTL IFAACSNFWL NYPSTSSRLE HFVAILHKCF DSPWTTRALS BACU006380/1-769 FPFLVLLHTL IFAACSNFWL NYPSTSSRLE HFVAILHKCF DSPWTTRALS 201 250 ENSP00000332674/1-803 ETVAEQSVRP LKLSKSKILL SSSGCSA-DI DSGKQSLPYP QPGLESAGIE ENSBTAP00000026919/1-804 ETVAEQSVRP LTLSKSKVLL SSSGCSAGDV DSNKQSLPYP QPGLESAGIE ENSTTRP00000006220/1-803 ETVAEQSVRP LTLSKSKVLL SSSGCSA-EV DSNKQSLPYP QPGLESAGIE bmy_13680T0/1-873 ETVAEQSVRP LMLSKSKVLL SPSGCSA-DV DSNKQSLPYP QPGLESAGIE BACU006380/1-769 ETVAEQSVRP LTLSKSKVLL SPSGCSA-DV DSNKQSLPYP QPGLESAGIE 251 300 ENSP00000332674/1-803 SPTSSVLDKK EGEQAKAIFE KVKRFRMHVE QKDIIYRVYL KQIIVKVILF ENSBTAP00000026919/1-804 SPTSSVLDKK EGEQAKAIFE KVKRFRLHVE QKDIIYRVYL KQIIVKVILF ENSTTRP00000006220/1-803 SPTSSVLDKK EGEQAKAIFE KVKRFRMHVE QKDIIYRVYL KQIIVKVILF bmy_13680T0/1-873 SPTSSVLDKK EGEQAKAIFE KVKRFRMHVE QKDIIYRVYL KQIIVKVILF BACU006380/1-769 SPTSSVLDKK EGEQAKAIFE KVKRFRMHVE QKDIIYRVYL KQIIVKVILF 301 350 ENSP00000332674/1-803 VLIITYVPYF LTHITLEIDC SVDVQAFTGY KRYQCVYSLA EIFKVLASFY ENSBTAP00000026919/1-804 VLIITYVPYF LTYITLEIDC SVDVQAFTGY KRYQCVYSLA EIFKVLASFY ENSTTRP00000006220/1-803 VLIITYVPYF LTYITLEIDC SVDVQAFTGY KRYQCVYSLA EIFKVLASFY bmy_13680T0/1-873 VLIITYVPYF LTYVTLEIDC SVDVQAFTGY KRYQCVYSLA EIFKVLASFY BACU006380/1-769 VLIITYVPYF LTYITLEIDC SVDVQAFTGY KRYQCVYSLA EIFKVLASFY 351 400 ENSP00000332674/1-803 VILVILYGLT SSYSLWWMLR SSLKQYSFEA LREKSNYSDI PDVKNDFAFI ENSBTAP00000026919/1-804 VILVILYGLT SSYSLWWMLR SSLKQYSFEA LREKSNYSDI PDVKNDFAFI ENSTTRP00000006220/1-803 VILVILYGLT SSYSLWWMLR SSLKQYSFEA LREKSNYSDI PDVKNDFAFI bmy_13680T0/1-873 VILVILYGLT SSYSLWWMLR SSLKQYSFEA LREKSNYSDI PDVKNDFAFI BACU006380/1-769 VILVILYGLT SSYSLWWMLR NSLKQYSFEA LREKSNYSDI PDVKNDFAFI 401 450 ENSP00000332674/1-803 LHLADQYDPL YSKRFSIFLS EVSENKLKQI NLNNEWTVEK LKSKLVKNAQ ENSBTAP00000026919/1-804 LHLADQYDPL YSKRFSIFLS EVSENKLKQI NLNNEWTVEK LKSKLVKNAQ ENSTTRP00000006220/1-803 LHLADQYDPL YSKRFSIFLS EVSENKLKQI NLNNEWTVEK LKSKLVKNSQ bmy_13680T0/1-873 LHLADQYDPL YSKRFSIFLS EVSENKLKQI NLNNEWTVEK LKSKLVKNSQ BACU006380/1-769 LHLADQYDPL YSKRFSIFLS EVSENKLKQI NLNNEWTVEK LKSKLVKNSQ 451 500 ENSP00000332674/1-803 DKIELHLFML NGLPDNVFEL TEMEVLSLEL IPEVKLPSAV SQLVNLKELR ENSBTAP00000026919/1-804 DKVELHLFML NGLPDNVFEL TEIEVLSLEL IPEVKLPSAI SQLVSLKELH ENSTTRP00000006220/1-803 DKIELHLFML NGLPDNVFEL TEIEVLSLEL IPEVKLPSAV SQLVNLKELH bmy_13680T0/1-873 DKIELHLFML NGLPDNVFEL TEIEVLSLEL IPEVKLPSAV SQLVNLKELH BACU006380/1-769 DKIELHLFML NGLPDNVFEL TEIEVLSLEL IPEVKLPSAV SQLVNLKELH 501 550 ENSP00000332674/1-803 VYHSSLVVDH PALAFLEENL KILRLKFTEM GKIPRWVFHL KNLKELYLSG ENSBTAP00000026919/1-804 VYHSSLVVDH PALAFLEENL KILRLKFTEM GKIPRWVFHL KNLKELYLSG ENSTTRP00000006220/1-803 VYHSSLVVDH PALAFLEENL KILRLKFTEM GKIPRWVFHL KNLKELYLSG bmy_13680T0/1-873 VYHSSLVVDH PALAFLEENL KILRLKFTEM GKIPRWV--- ---------- BACU006380/1-769 VYHSSLVVDH PALAFLEENL KILRLKFTEM GKIPRWVFHL KNLKELYLSG 551 600 ENSP00000332674/1-803 CVLPEQLSTM QLEGFQDLKN LRTLYLKSSL SRIPQVVTDL LPSLQKLSLD ENSBTAP00000026919/1-804 CVLPEQVSTM QLEGFQDLKN LRTLYLKSSL SRIPQVITDL LPSLQKLSLD ENSTTRP00000006220/1-803 CVLPEQVSTM QLEGFQDLKN LRTLYLKSSI SRIPQVITDL LPSLQKLSLD bmy_13680T0/1-873 -------STM QLEGFQDLKN LRTLYLKSSI SRIPQVITDL LPSLQKLSLD BACU006380/1-769 CVLPEQVSTM QLEGFQDLKN LRTLYLKSSI SRIPQVITDL LPSLQKLSLD 601 650 ENSP00000332674/1-803 NEGSKLVVLN NLKKMVNLKS LELISCDLER IPHSIFSLNN LHELDLRENN ENSBTAP00000026919/1-804 NEGSKLVVLN NLKKMVNLKS LELISCDLER IPHSIFSLNN LHELDLRENN ENSTTRP00000006220/1-803 NEGSKLVVLN NLKKMVNLKS LELISCDLER IPHSIFSLNN LHELNLKENN bmy_13680T0/1-873 NEGSKLVVLN NLKKMVNLKS LELISCDLER IPHSIFSLNN LHELNLKENN BACU006380/1-769 NEGSKLVVLN NLKKMVNLKS LELISCDLER IPHSIFSLNN LHELNLKENN 651 700 ENSP00000332674/1-803 LKTVEEIISF QHLQNLSCLK LWHNNIAYIP AQIGALSNLE QLSLDHNNIE ENSBTAP00000026919/1-804 LKTVEEIISF QHLQNLSCLK LWHNNIAYIP AQIGALSNLE QLSLDHNNIE ENSTTRP00000006220/1-803 LKTVEEIISF QHLQNLSCLK LWHNNIAYIP AQIGALSNLE QLSLDHNNIE bmy_13680T0/1-873 LKTVEEIISF QHLQNLSCLK LWHNNIAYIP AQIGALSNLE QLSLDHNNIE BACU006380/1-769 LKTVEEIISF QHLQNLSCLK LWHNNIAYIP AQIGALSNLE QLSLDHNNIE 701 750 ENSP00000332674/1-803 NLPLQLFLCT KLHYLDLSYN HLTFIPEEIQ YLSNLQYFAV TNNN------ ENSBTAP00000026919/1-804 NLPLQLFLCT KLHYLDLSYN HLTFIPEEIQ YLSNLQYFAV TNNN------ ENSTTRP00000006220/1-803 NLPLQLFLCT KLHYLDLSYN HLTFIPEEIQ YLSNLQYFAV TNNN------ bmy_13680T0/1-873 NLPLQLFLCT KLHYLDLSCN HLTFIPEEIQ YLSNLQYFAV TNNNDEEKDK BACU006380/1-769 NLPLQLFLCT KLYYLDLSCN HLTFIPEEIQ YLSNLQYFAV TNNN------ 751 800 ENSP00000332674/1-803 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000026919/1-804 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000006220/1-803 ---------- ---------- ---------- ---------- ---------- bmy_13680T0/1-873 KSCWLKGQEN DGNVYPFEET VLEGPGSSSR EVAQWGYTSP SEEQIEIWSA BACU006380/1-769 ---------- ---------- ---------- ---------- ---------- 801 850 ENSP00000332674/1-803 ----IEMLPD GLFQCKKLQC LLLGKNSLMN LSPHVGELSN LTHLELIGNY ENSBTAP00000026919/1-804 ----IEMLPD GLFQCKKLQC LLLGKNSLMS LSPHVGELSN LTHLELIGNY ENSTTRP00000006220/1-803 ----IEMLPD GLFQCKKLQC LLLGKNSLMS LSPHVGELSN LTHLELIGNY bmy_13680T0/1-873 PFIPIEMLPD GLFQCKKLQC LLLGKNSLMS LSPHVGELAN LTHLELIGNY BACU006380/1-769 ----IEMLPD GLFQCKKLQC LLLGKNSLMS LSPHVGELAN LTHLELIGNY 851 900 ENSP00000332674/1-803 LETLPPELEG CQSLKRNCLI VEENLLNTLP LPVTERLQTC LDKC ENSBTAP00000026919/1-804 LETLPPELEG CQSLKRSCLI VEENLLNTLP PPVTERLQTC LDKC ENSTTRP00000006220/1-803 LETLPPELEG CQSLKRSCLI VEENLLNTLP PPVTERLQTC LDKC bmy_13680T0/1-873 LETLPPELEG CQSLKRSCLI VEENLLSTLP PPVTERLQTC LDKC BACU006380/1-769 LETLPPELEG CQSLKRSCLI VEENLLNTLP PPVTERLQTC LDKC