KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:30:54 2014 Check: 00 .. Name: ENSP00000299432/1-460 Len: 460 Check: 9577 Weight: 1.00 Name: ENSTTRP00000000787/1-449 Len: 460 Check: 6113 Weight: 1.00 Name: bmy_08675T0/1-300 Len: 460 Check: 7762 Weight: 1.00 Name: ENSBTAP00000026928/1-460 Len: 460 Check: 6355 Weight: 1.00 // 1 50 ENSP00000299432/1-460 MAPRSRRRRH KKPPSSVAPI IMAPTTIVTP VPLTPSKPGP SIDTLGFFSL ENSTTRP00000000787/1-449 MAPRS-RRRH KKLPSSVAPV VVTPPTVVTP VPLTLSKPGP SIDTLGCFSL bmy_08675T0/1-300 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000026928/1-460 MAPRSRRRRH KKSPSSVAPV VETPPTVVAP VPLILTKPGP SIDKLGFSSL 51 100 ENSP00000299432/1-460 DDNVPGLSQL ILQKLNMKSY EEYKLVVDGG TPVSGFGFRC PQEMFQRMED ENSTTRP00000000787/1-449 ENNVPGLSQL ILQ-LNMKSY EEYKLVLDGD TPVSGFGYRC LQEMFQKMED bmy_08675T0/1-300 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000026928/1-460 EDNVPGLSQL ILQKLNMKSY EEYKLVLDGG TPVSGFGYRC LEEMFQKMED 101 150 ENSP00000299432/1-460 TFRFCAHCRA LPSGLSDSKV LRHCKRCRNV YYCGPECQKS DWPAHRRVCQ ENSTTRP00000000787/1-449 TFRFCAHCKV LPSGLSNSRV LR---RCRSV YYCGPECQRS DWPAHRRVCQ bmy_08675T0/1-300 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000026928/1-460 TFRFCAYCKA LPRGLSDSKV LRHCKRCRNV YYCGPECQKS DWPTHRKVCQ 151 200 ENSP00000299432/1-460 ELRLVAVDRL MEWLLVTGDF VLPSGPWPWP PEAVQDWDSW FSMKGLHLDA ENSTTRP00000000787/1-449 ELRLVAVDRL MEWPLVTGGF VLPSGPWSWL TEGAQGWDTW FSMR-LQLEA bmy_08675T0/1-300 ---------- MEWLLVTGDF VLPSGPWSWL TEVVQGWDTW FSMRRLQLEA ENSBTAP00000026928/1-460 ELRLVAVDRL MEWLLVTGDF VLPSGPWSWL TEVVQGWDTW FSMRRLQLDD 201 250 ENSP00000299432/1-460 TLDAVLVSHA VTTLWASVGR PRPDPDVLQG SLKRLLTDVL SRPLTLGLGL ENSTTRP00000000787/1-449 TLDAMLGSQA MTTLWANVGW PRPDPDVLQG SLKRLLTDAL SRPLTLGFGL bmy_08675T0/1-300 TLDAVLGSQA MTTLWASVGW PRPDPDVLQG SLKRLLTIAL SRPLTLGFGL ENSBTAP00000026928/1-460 TMDAVLDSQA MTTLWASVRR PRPDPDVLKG SLKRLLTDVL SRPLTLGFGL 251 300 ENSP00000299432/1-460 RALGIDVRRT GGSTVHVVGA SHVETFLTRP GDYDELGYMF PGHLGLRVVM ENSTTRP00000000787/1-449 RALGINVGRV GGSTVHVVGA FHAETFLTH- -DYDE-GYMF PGHLGLHVIM bmy_08675T0/1-300 RALGINVGKV GGSTVHVVGA SHAETFLTHP GDYDELGYMF PGHLGLHVIM ENSBTAP00000026928/1-460 RALGINVGKV GGSTVHVVGA SHAETFLTRP GDYDELGYMF PGHLGLHVIM 301 350 ENSP00000299432/1-460 VGVDVATGFS QSTSTSPLEP GTIQLSAHRG LYHDFWEEQV ETGQTHHPDL ENSTTRP00000000787/1-449 VGVDVAAG-- SQSATSLLEP GTVQLSSHRG LYHDFWEEQV ESGQIAHPDL bmy_08675T0/1-300 VGVDVAAGFS QSASPSLLEP GTVQLSGHRG LYHDFWEEQV ESGQIAHPDL ENSBTAP00000026928/1-460 VGVDVAAGFS QSTSASLLEP GTVQLSSHRG LYHDFWEEQI ETGQIAHPDL 351 400 ENSP00000299432/1-460 VAAFHPGFHS SPDLMEAWLP TLLLLRDYKI PTLITVYSHQ ELVSSLQILV ENSTTRP00000000787/1-449 VVAFHPGFHA SLDLMEAWLP TLLLLCDYEI PTMITVYSQQ ELAASLQILV bmy_08675T0/1-300 VVAFHPGFHA SPDLMEAWLP TLLLLRDYEI PTMITVYSQQ ELAASLQVLV ENSBTAP00000026928/1-460 VVAFHPGFHA SPDLMEAWLP TLLLLRDYGI PTMITVYSHQ ELAASLQILV 401 450 ENSP00000299432/1-460 ELDTHITAFG SNPFMSLKPE QVYSSPNKQP VYCSAYYIMF LGSSCQLDNR ENSTTRP00000000787/1-449 DMDTHITACG ANPFASLKPE QVYSNPNKQP VYCSAYYITF LGSSCQLDKR bmy_08675T0/1-300 DLDTHITAYG ANPFASLKPE QVYSNPNKQP VYCSAYYIMF LGSSCQLDKR ENSBTAP00000026928/1-460 DLDTHITAYG ANPFASLKPE QVYSNPNKQP VYCSAYYIMF LGSSCQLDKR 451 500 ENSP00000299432/1-460 QLEEKVDGGI ENSTTRP00000000787/1-449 QLEEKVNGRV bmy_08675T0/1-300 QLEEKVNGRV ENSBTAP00000026928/1-460 QLEEKVNDRV