KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:30:56 2014 Check: 00 .. Name: bmy_05552T0/1-256 Len: 275 Check: 7588 Weight: 1.00 Name: BACU003053/1-261 Len: 275 Check: 934 Weight: 1.00 Name: ENSTTRP00000013513/1-275 Len: 275 Check: 5582 Weight: 1.00 Name: ENSP00000341737/1-275 Len: 275 Check: 4537 Weight: 1.00 Name: ENSBTAP00000026951/1-275 Len: 275 Check: 5466 Weight: 1.00 // 1 50 bmy_05552T0/1-256 MAAELEYESV LCVKPDVSVY RIPPRASNRG YRASDWKLDQ PDWTGRLRIT BACU003053/1-261 MAAELEYESV LCVKPDVSVY RIPPRASNRG YRASDWKLDQ PDWTGRLRIT ENSTTRP00000013513/1-275 MAAELEYESV LCVKPDVSVY RIPPRASNRG YRASDWKLDQ PDWTGRLRIT ENSP00000341737/1-275 MATELEYESV LCVKPDVSVY RIPPRASNRG YRASDWKLDQ PDWTGRLRIT ENSBTAP00000026951/1-275 MASELEYESV LCVKPDVSVY RIPPRASNRG YRASDWKLDQ PDWTGRLRIT 51 100 bmy_05552T0/1-256 SKGKIAYIKL EDKVSGELFA QAPVEQYPGI AVETVTDSSR YFVIRIQDGT BACU003053/1-261 SKGKIAYIKL EDKVSGELFA QAPVEQYPGI AVETVTDSSR YFVIRIQDGT ENSTTRP00000013513/1-275 SKGKIAYIKL EDKVSGELFA QAPVEQYPGI AVETVTDSSR YFVIRIQDGT ENSP00000341737/1-275 SKGKTAYIKL EDKVSGELFA QAPVEQYPGI AVETVTDSSR YFVIRIQDGT ENSBTAP00000026951/1-275 SKGKVAYIKL EDKVSGELFA QAPVEQYPGI AVETVTDSSR YFVIRIQDGT 101 150 bmy_05552T0/1-256 GRSAFIGIGF SDRGDAFDFN VSLQDHFKWV KQESEISKES QEMDNRPKLD BACU003053/1-261 GRSAFIGIGF SDRGDAFDFN VSLQDHFKWV KQESEISKES QEMDNRPKLD ENSTTRP00000013513/1-275 GRSAFIGIGF SDRGDAFDFN VSLQDHFKWV KQESEISKES QEMDNRPKLD ENSP00000341737/1-275 GRSAFIGIGF TDRGDAFDFN VSLQDHFKWV KQESEISKES QEMDARPKLD ENSBTAP00000026951/1-275 GRSAFIGIGF SDRGDAFDFN VSLQDHFKWV KQESEISKES QEMDSRPKLD 151 200 bmy_05552T0/1-256 LGFKEGQTIK LSIGNITTKK GGASRPKTTA AGGLSLLPPP PGGRVTIPPP BACU003053/1-261 LGFKEGQTIK LSIGNITTKK GGASRPKTTV TGGLSLLPPP PGGRVTIPPP ENSTTRP00000013513/1-275 LGFKEGQTIK LSIGNITTKK GGASRPKTTA AGGLSLLPPP PGGRVTIPPP ENSP00000341737/1-275 LGFKEGQTIK LCIGNITNKK GGASKPRTAR GGGLSLLPPP PGGKVTIPPP ENSBTAP00000026951/1-275 LGFKEGQTIK LSIGNITTKK GGTSKPKTAG TGGLSLLPPP PGGKVTIPPP 201 250 bmy_05552T0/1-256 SSSVAISNHV TPPPVPKSSH GGTDAALFQT RHHSHPTG-- -----SSSEE BACU003053/1-261 SSSVAISNHV TPPPVPKSSH GGTDADILLD LDSPAPVTTP APAPVSASND ENSTTRP00000013513/1-275 SSSVAISNHV TPPPVPKSSH GGTDADILLD LDSPAPVTTP APAPVSASND ENSP00000341737/1-275 SSSVAISNHV TPPPIPKSNH GGSDADILLD LDSPAPVTTP APTPVSVSND ENSBTAP00000026951/1-275 SSSVAISNHV TPPPIPKSNH GGSDADILLD LDSPAPITTP APAPVSASND 251 300 bmy_05552T0/1-256 HWQDIKDRLE ESQ------- ----- BACU003053/1-261 LWGDFSTASR Y--------- ----- ENSTTRP00000013513/1-275 LWGDFSTASS SVPNQAPQPS NWVQF ENSP00000341737/1-275 LWGDFSTASS SVPNQAPQPS NWVQF ENSBTAP00000026951/1-275 LWGDFSTASS SVPNQAPQPS NWVQF