KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:30:56 2014 Check: 00 .. Name: ENSP00000328737/1-246 Len: 247 Check: 613 Weight: 1.00 Name: ENSBTAP00000026978/1-246 Len: 247 Check: 1694 Weight: 1.00 Name: ENSTTRP00000007823/1-247 Len: 247 Check: 4242 Weight: 1.00 Name: bmy_22632T0/1-197 Len: 247 Check: 6895 Weight: 1.00 Name: BACU002068/1-194 Len: 247 Check: 1334 Weight: 1.00 // 1 50 ENSP00000328737/1-246 MGPQHLRLVQ LFCLLGAIST LPRAGALLCY EATASRFRAV AFHNWKWLL- ENSBTAP00000026978/1-246 MGPQHLSPMQ LLCLLGAISS LPWAEALLCY EATSSLFRAV GLHRWQWFL- ENSTTRP00000007823/1-247 MGPQHLSPVQ LLCLLGAIST LPXXXXXXXX XXXXXXXXXX XXXXXXXXXX bmy_22632T0/1-197 ---------- ---------- ---------- ---------- ---------- BACU002068/1-194 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000328737/1-246 MRNMVCKLQE GCEETLVFIE TGTARGVVGF KGCSSSSSYP AQISYLVSPP ENSBTAP00000026978/1-246 LRSMVCKLNE GCEETLVFIE AGTRKGILGF KGCSPASSYP PQVSYLVSPP ENSTTRP00000007823/1-247 XXXXXXXMNE GCEETLVFIE TGTRRGIVGF KGCSPASSYP PQVSYLVSPP bmy_22632T0/1-197 MRSMVCKLNE GCEETLVFIE TGTKRGIVGF KGCSPASSYP PQVSYLVSPP BACU002068/1-194 ---MVCKLNE GCEETLVFIE TGTKRGIVGF KGCSPASSYP PQVSYLVSPP 101 150 ENSP00000328737/1-246 GVSIASYSRV CRSYLCNNLT NLEPFVKLKA STPKSITSAS CSCPTCVGEH ENSBTAP00000026978/1-246 GLSIASYSRV CRTYLCNNLT NMNAILHLKA RTPKTLKSSS HSCPTCVGEH ENSTTRP00000007823/1-247 GLSIASYSRV CRTYLCNNLT NMDPFVKLKA KAPKTLASSS HSCPTCVGEH bmy_22632T0/1-197 GLSIASYSRV CRTYLCNNLT NMDHFGKLKA KAPKTVASSS HSCPTCVGEH BACU002068/1-194 GLSIASYSRV CRTYLCNNLT NMDHFVKLKA KAPKTVASSS RSCPTCVGEH 151 200 ENSP00000328737/1-246 MKDCLPNFVT TNSCPLAAST CYSSTLKFQA GFLNTTFLLM GCAREHNQLL ENSBTAP00000026978/1-246 SKSCLPNFVS SESCPRDATK CYSSTVKFQA GFLNTTFLLM GCAREHTSVF ENSTTRP00000007823/1-247 SKDCLPNFVT TEACPNNATE CYSSTLKFQA GYLNTTFLLM GCARENTDIL bmy_22632T0/1-197 SKDCLPNFVT TEACPENATE CYSSTLKFQA GSLNTTFLLM GCAREYTDIL BACU002068/1-194 SKDCLPSFVT TEACPDNATE CYSSTLKFQA GALNTTFLLM GCAREYTDIL 201 250 ENSP00000328737/1-246 ADFHHIGSIK VTEVLNILEK SQIVGAASSR QDPAWGVVLG LLFAFRD ENSBTAP00000026978/1-246 AHFHHIGSIR VTEVINIVEK ALFTGAGTPC RSPSWGILLG LLFAFKG ENSTTRP00000007823/1-247 SHFHHIGSIR VTEAINILEK AQFAGAEPSS GRPAWGILLG LLFAFRD bmy_22632T0/1-197 AHFHHIGSIR VTEVINILEK AQFAGAEPSS RRPAWGILLG LLFAFRD BACU002068/1-194 AHFHHIGSIR VTEVINILEK AQFAGAEPSS GRPARGILLG LLFAFRD