KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:30:57 2014 Check: 00 .. Name: BACU001244/1-1367 Len: 1392 Check: 9704 Weight: 1.00 Name: ENSBTAP00000026987/1-669 Len: 1392 Check: 916 Weight: 1.00 Name: bmy_01750T0/1-626 Len: 1392 Check: 1803 Weight: 1.00 Name: ENSP00000305288/1-835 Len: 1392 Check: 8912 Weight: 1.00 // 1 50 BACU001244/1-1367 ---------- -------MGG LTSGGDVEPG LPVEVRGSNG --------AF ENSBTAP00000026987/1-669 ---------- ---------- ---------- ---------- ---------- bmy_01750T0/1-626 MWLLALCLVG LAGAQRGGGG PGGGAPGGPG LGLGSLGEER FPVVNTAYGR ENSP00000305288/1-835 MWLLALCLVG LAGAQRGGGG PGGGAPGGPG LGLGSLGEER FPVVNTAYGR 51 100 BACU001244/1-1367 YKGFVKDVHE DSVTIFFENN WQSERQIPFG DVRLPPPADY NKEITEGDEV ENSBTAP00000026987/1-669 ---------- ---------- ---------- ---------- ---------- bmy_01750T0/1-626 VRGVRRELNN EILGPVVQFL GVPYATPPLG ARRFQPP--- ---------- ENSP00000305288/1-835 VRGVRRELNN EILGPVVQFL GVPYATPPLG ARRFQPP--- ---------- 101 150 BACU001244/1-1367 EVGPAFTFSY FLPLPLRMMK GDFYVIEYAA CDATYNEIVT LERLRPVNPN ENSBTAP00000026987/1-669 ---------- ---------- ---------- ---------- ---------- bmy_01750T0/1-626 ---------- ---------- ---------E APASWPGVRN ATTLPPACPQ ENSP00000305288/1-835 ---------- ---------- ---------E APASWPGVRN ATTLPPACPQ 151 200 BACU001244/1-1367 PLATKGSFFK VTMAVPEDLR EACSNENVHK EFKKALGANC IFLNITNSEL ENSBTAP00000026987/1-669 ---------- ---------- ---------- ---------- ---------- bmy_01750T0/1-626 ---------- ---------- ---------- ---------- ---------- ENSP00000305288/1-835 ---------- ---------- ---------- ---------- ---------- 201 250 BACU001244/1-1367 FILNLHAALP AIMLPVWFTD NLEAAATYVQ NQSEDCLYLN LYVPTEDGLL ENSBTAP00000026987/1-669 ---------- ---------- ---------- ---------- ---------- bmy_01750T0/1-626 ---NLHGALP AIMLPVWFTD NLEAAATYVQ NQSEDCLYLN LYVPTEDGPL ENSP00000305288/1-835 ---NLHGALP AIMLPVWFTD NLEAAATYVQ NQSEDCLYLN LYVPTEDGPL 251 300 BACU001244/1-1367 TKKRDEATLN PPDTDIRDSG KKPVMLFLHG GSYMEGTGNM FDGSVLAAYG ENSBTAP00000026987/1-669 ---------- PPHTDIRDSG KKPVMLFLHG GSYMEGTGNM FDGSVLAAYG bmy_01750T0/1-626 TKKRDEATLN PPDTDIRDSG KKPVMLFLHG GSYMEGTGNM FDGSVLAAYG ENSP00000305288/1-835 TKKRDEATLN PPDTDIRDPG KKPVMLFLHG GSYMEGTGNM FDGSVLAAYG 301 350 BACU001244/1-1367 NVIVATLNYR LGVLGFLSTG DQAAKGNYGL LDQIQALRWL SENIAHFGGD ENSBTAP00000026987/1-669 NVIVATLNYR LGVLGFLSTG DQAAKGNYGL LDQIQALRWL SENIAHFGGD bmy_01750T0/1-626 NVIVATLNYR LGVLGFLSTG DQAAKGNYGL LDQIQALRWL SENIAHFGGD ENSP00000305288/1-835 NVIVATLNYR LGVLGFLSTG DQAAKGNYGL LDQIQALRWL SENIAHFGGD 351 400 BACU001244/1-1367 PERITIFGSG AGASCVNLLI LSHRSEGLFQ KAIAQSGTAI SSWSVNYQPL ENSBTAP00000026987/1-669 PERITIFGSG AGASCVNLLI LSHHSEGLFQ KAIAQSGTAI SSWSVNYQPL bmy_01750T0/1-626 PERITIFGSG AGASCVNLLI LSHHSEGLFQ KAIAQSGTAI SSWSVNYQPL ENSP00000305288/1-835 PERITIFGSG AGASCVNLLI LSHHSEGLFQ KAIAQSGTAI SSWSVNYQPL 401 450 BACU001244/1-1367 KYTRLLAAKV GCDREDSAEA VECLRRKPSR ELVDQDVQPA RYHIAFGPVV ENSBTAP00000026987/1-669 KYTRLLAAKV GCDREDSAEA VECLRRKPSR ELVDQDVQPA RYHIAFGPVV bmy_01750T0/1-626 KYTRLLAAKV GCDREDSAEA VECLRRKPSR ELVDQDVQPA RYHIAFGPVV ENSP00000305288/1-835 KYTRLLAAKV GCDREDSAEA VECLRRKPSR ELVDQDVQPA RYHIAFGPVV 451 500 BACU001244/1-1367 DGDVVPDDPE ILMQQGEFLN YDMLIGVNQG EGLKFVEDSA ESEDGVSASA ENSBTAP00000026987/1-669 DGDVVPDDPE ILMQQGEFLN YDMLIGVNQG EGLKFVEDSA ESEDGVSAS- bmy_01750T0/1-626 DGDVVPDDPE ILMQQGEFLN YDMLIGVNQG EGLKFVEDSA ESEDGVSASA ENSP00000305288/1-835 DGDVVPDDPE ILMQQGEFLN YDMLIGVNQG EGLKFVEDSA ESEDGVSASA 501 550 BACU001244/1-1367 FDFTVSNFVD NLYGYPEGKD VLRETIKFMY TDWADRDNGE MRRKTLLALF ENSBTAP00000026987/1-669 FDFTVSNFVD NLYGYPEGKD VLRETIKFMY TDWADRDNGE MRRKTLLALF bmy_01750T0/1-626 FDFTVSNFVD NLYGYPEGKD VLRETIKFMY TDWADRDNGE MRRKTLLALF ENSP00000305288/1-835 FDFTVSNFVD NLYGYPEGKD VLRETIKFMY TDWADRDNGE MRRKTLLALF 551 600 BACU001244/1-1367 TDHQWVAPAV ATAKLHADYQ SPVYFYTFYH HCQAEGRPEW ADAAHGDELP ENSBTAP00000026987/1-669 TDHQWVAPAV ATAKLHADYQ SPVYFYTFYH HCQAEGRPEW ADAAHGDELP bmy_01750T0/1-626 TDHQWVAPAV ATAKLHADYQ SPVYFYTFYH HCQAEGRPEW ADAAHGDELP ENSP00000305288/1-835 TDHQWVAPAV ATAKLHADYQ SPVYFYTFYH HCQAEGRPEW ADAAHGDELP 601 650 BACU001244/1-1367 YVFGVPMVGA TDLFPCNFSK NDVMLSAVVM TYWTNFAKTG DPNQPVPQDT ENSBTAP00000026987/1-669 YVFGVPMVGA TDLFPCNFSK NDVMLSAVVM TYWTNFAKTG DPNQPVPQDT bmy_01750T0/1-626 YVFGVPMVGA TDLFPCNFSK NDVMLSAVVM TYWTNFAKTG DPNQPVPQDT ENSP00000305288/1-835 YVFGVPMVGA TDLFPCNFSK NDVMLSAVVM TYWTNFAKTG DPNQPVPQDT 651 700 BACU001244/1-1367 KFIHTKPNRF EEVVWSKFNS KEKQYLHIGL KPRVRDNYRA NKVAFWLELV ENSBTAP00000026987/1-669 KFIHTKPNRF EEVVWSKFNS KEKQYLHIGL KPRVRDNYRA NKVAFWLELV bmy_01750T0/1-626 KFIHTKPNRF EEVVWSKFNS KEKQYLHIGL KPRVRDNYRA NKVAFWLELV ENSP00000305288/1-835 KFIHTKPNRF EEVVWSKFNS KEKQYLHIGL KPRVRDNYRA NKVAFWLELV 701 750 BACU001244/1-1367 PHLHNLHTEL FTTTTRLPPY ATRWPPRPPP GAPGTRRPPP PATLPPEPEP ENSBTAP00000026987/1-669 PHLHNLHTEL FTTTTRLPPY ATRWPPRPPP GAPGTRRPPP PATLPPEPEP bmy_01750T0/1-626 PHLHNLHTEL F-TTTRLPPY AT-------- ---------- ---------- ENSP00000305288/1-835 PHLHNLHTEL FTTTTRLPPY ATRWPPRPPA GAPGTRRPPP PATLPPEPEP 751 800 BACU001244/1-1367 EPGPRAYDRF PGDSRDYSTE LSVTVAVGAS LLFLNILAFA ALYYKRDRRQ ENSBTAP00000026987/1-669 EPGPRAYDRF PGDSRDYSTE LSVTVAVGAS LLFLNILAFA ALYYKRDRRQ bmy_01750T0/1-626 ---------- ---------- ---------- ---------- ---------- ENSP00000305288/1-835 EPGPRAYDRF PGDSRDYSTE LSVTVAVGAS LLFLNILAFA ALYYKRDRRQ 801 850 BACU001244/1-1367 ELRILKLPQS PGNLVLFRVA QKPPSGEEGP SSADPLAHCA LGTLLASGRE ENSBTAP00000026987/1-669 ELRCRRLS-- ---------- --PPGG---- ---------- ------SGSG bmy_01750T0/1-626 ---------- ---------- ---------- ---------- ---------- ENSP00000305288/1-835 ELRCRRLS-- ---------- --PPGG---- ---------- ------SGSG 851 900 BACU001244/1-1367 KNGGQFSAAK GTAPLGFLPS VYFLAPKRQS HMASAVWGSA PWWGPPPPAP ENSBTAP00000026987/1-669 VPGG------ ---------- ---------- ---------- ---GPLLPAA bmy_01750T0/1-626 ---------- ---------- ---------- ---------- ---------- ENSP00000305288/1-835 VPGG------ ---------- ---------- ---------- ---GPLLPAA 901 950 BACU001244/1-1367 ARPLTDIDFC SGAQLQELTQ LIQELGVQES WSEGPKPGPD LLQAKDFVFS ENSBTAP00000026987/1-669 GREL------ ---------- ---------- ---------- ---------- bmy_01750T0/1-626 ---------- ---------- ---------- ---------- ---------- ENSP00000305288/1-835 GREL------ ---------- ---------- ---------- ---------- 951 1000 BACU001244/1-1367 LLGLVHRRDP RFPPQAELLL LRGGIREGSL DLGPAPLGPY ARGPHYDASF ENSBTAP00000026987/1-669 ---------- --PPEEELVS L--------- ---------- ---------- bmy_01750T0/1-626 ---------- ---------- ---------- ---------- ---------- ENSP00000305288/1-835 ---------- --PPEEELVS L--------- ---------- ---------- 1001 1050 BACU001244/1-1367 TLLVPVLSLD GTGQELQPDV GSCYAWLFLP EQVRGTSVRE AWQDCLGPPV ENSBTAP00000026987/1-669 ---------- ---------- ---------- QLKRGGGVGA DPAEALRPAC bmy_01750T0/1-626 ---------- ---------- ---------- ---------- ---------- ENSP00000305288/1-835 ---------- ---------- ---------- QLKRGGGVGA DPAEALRPAC 1051 1100 BACU001244/1-1367 PGGRDSIHPA QSKQTPKDPQ ISVDQLHGDV TEPEAHESLE KSPSNVSVPE ENSBTAP00000026987/1-669 P--------- ---------- ---------- --PDYTLALR RAPDDV---- bmy_01750T0/1-626 ---------- ---------- ---------- ---------- ---------- ENSP00000305288/1-835 P--------- ---------- ---------- --PDYTLALR RAPDDV---- 1101 1150 BACU001244/1-1367 LPQQDVTDVD VPSPLKKTNG DVTKAADVSP VPQPSEAREA WPTLCPAQVA ENSBTAP00000026987/1-669 ---------- ---------- ---------- ---------- -PLLAP---- bmy_01750T0/1-626 ---------- ---------- ---------- ---------- ---------- ENSP00000305288/1-835 ---------- ---------- ---------- ---------- -PLLAP---- 1151 1200 BACU001244/1-1367 AWFFASLAAV AESLFPVPGA PRLVHAARHA GVTTILLATP GSPRRLLLFD ENSBTAP00000026987/1-669 ---------- ---------- ---------- GALTLLPSGL GPPPPPPPPS bmy_01750T0/1-626 ---------- ---------- ---------- ---------- ---------- ENSP00000305288/1-835 ---------- ---------- ---------- GALTLLPSGL GPPPPPPPPS 1201 1250 BACU001244/1-1367 LIPVVSVAGW PQEARSHSWA GPLASESSSF YLVPGGGGTE RPGASGWQLC ENSBTAP00000026987/1-669 LHPFGPFPPP PPTATSHN-- ---------- ---------- ---------- bmy_01750T0/1-626 ---------- ---------- ---------- ---------- ---------- ENSP00000305288/1-835 LHPFGPFPPP PPTATSHN-- ---------- ---------- ---------- 1251 1300 BACU001244/1-1367 FARQELALKM RIPVPLLQAH AAAQALLRPL VAGTRVAAPY LLRTLLYWAC ENSBTAP00000026987/1-669 ---------- ---------- ---------- ---------- ---------- bmy_01750T0/1-626 ---------- ---------- ---------- ---------- ---------- ENSP00000305288/1-835 ---------- ---------- ---------- ---------- ---------- 1301 1350 BACU001244/1-1367 ERLPALYLAR PENAGACCLG LLDELGRVLE AGTLPHYFLS GQKLGAGDGA ENSBTAP00000026987/1-669 ---------- ---------- ---------- -NTLPH---- ---------- bmy_01750T0/1-626 ---------- ---------- ---------- ---------- ---------- ENSP00000305288/1-835 ---------- ---------- ---------- -NTLPH---- ---------- 1351 1400 BACU001244/1-1367 ASLLGALALL RRDPARALRA AVEEAKAARK GGGLAGVGGG AH ENSBTAP00000026987/1-669 ---------- ---PHSTTRV ---------- ---------- -- bmy_01750T0/1-626 ---------- ---------- ---------- ---------- -- ENSP00000305288/1-835 ---------- ---PHSTTRV ---------- ---------- --