KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:30:59 2014 Check: 00 .. Name: ENSTTRP00000013055/1-546 Len: 595 Check: 6598 Weight: 1.00 Name: ENSP00000351342/1-565 Len: 595 Check: 9570 Weight: 1.00 Name: ENSBTAP00000026996/1-539 Len: 595 Check: 821 Weight: 1.00 Name: bmy_03635T0/1-504 Len: 595 Check: 9333 Weight: 1.00 Name: BACU005601/1-593 Len: 595 Check: 7566 Weight: 1.00 // 1 50 ENSTTRP00000013055/1-546 ---------- ---------- ---------- --MDEAQSER ENHTADDSEG ENSP00000351342/1-565 ---------- ---------- ---------- MNYEGARSER ENHAADDSEG ENSBTAP00000026996/1-539 ---------- ---------- ---------- ---------- ---------- bmy_03635T0/1-504 ---------- ---------- ---------- ---------- ---------- BACU005601/1-593 MPDRIFMDDP DQGTGSPGIQ AQGWHQGRLG LKPETGVRER ENHTADDSEG 51 100 ENSTTRP00000013055/1-546 GALDMCCSER LPGVPQPVGM QALDQAEGPT ALQREVPLPP SPSPPSETAQ ENSP00000351342/1-565 GALDMCCSER LPGLPQPIVM EALDEAEGLQ DSQREMPPPP PPSPPSDPAQ ENSBTAP00000026996/1-539 ----MCCSER LPGVPQPVGM EALDQAEGPA ASQREMPPPP PASPPSEPAQ bmy_03635T0/1-504 ---------- ---------M EALDQAEGPT ALQREMPLPP PPSPPSEPAQ BACU005601/1-593 GALDMCCSER LPGVPQPVGM EALDQAEGPT ALQREVPLPP PPSPPSEPAQ 101 150 ENSTTRP00000013055/1-546 KPPPRDARSP SFAVRSSLCL LAASQFLXXX XXXXXXXXXX XXXXXXXXXX ENSP00000351342/1-565 KPPPRGAGSH SLTVRSSLCL FAASQFLLAC GVLWFSGYGH IWSQNATNLV ENSBTAP00000026996/1-539 KPPPRGAGSH SLTARSSLCL LAASQFLLAC GMLWLSGFGP IWTQNTTDVV bmy_03635T0/1-504 KPPPRGARSH SLTVRSSLCL LAASQFLLAC GMLWLSGYGP IWSQNATDLI BACU005601/1-593 KRPPRGARSH SLTVRSSLCL LAASQFLLAC GMLWLSGYGP IWSQNATDLI 151 200 ENSTTRP00000013055/1-546 SSVLTLLEQL GPSAWLAVGT WDVPNLLLVS LSV--VLITT LVWHLLRTPA ENSP00000351342/1-565 SSLLTLLKQL EPTAWLDSGT WGVPSLLLVF LSVGLVLVTT LVWHLLRTPP ENSBTAP00000026996/1-539 SSALTFLEQL GPSAWLGTGT WDAPSLLLVS LCV--ILITT LVWLLLRTPP bmy_03635T0/1-504 SSMLALLEQL GPSAWLAVGT WDVPNLLLVS LSV--VLVTT LVWHLLRTPP BACU005601/1-593 SSVLTLLEQL GPSAWLAVGT WDVPNLLLVS LSV--VLVTT LAWHLLRTPP 201 250 ENSTTRP00000013055/1-546 EPPSPLPPED RRQSVSRQPS FTYSEWMEEK VEDDFLDLDP VPETPVFDCV ENSP00000351342/1-565 EPPTPLPPED RRQSVSRQPS FTYSEWMEEK IEDDFLDLDP VPETPVFDCV ENSBTAP00000026996/1-539 EPTSPLPPED RRQSVSRQPS FTYSEWMEEK VEDDFLDLDP VPETPVFDCV bmy_03635T0/1-504 EPPTPLPPED RRQSVSRQPS FTYSEWMEEK VEDDFLDLDP VPETPVFDCV BACU005601/1-593 EPPTPLPPED RRQSVSRQPS FTYSEWMEEK VEDDFLDLDP VPETPVFDCV 251 300 ENSTTRP00000013055/1-546 MDIKLEADPA SLTVKAMGLQ EXXXXNVSLT LDMCTPGCNE EGFGYLMSPR ENSP00000351342/1-565 MDIKPEADPT SLTVKSMGLQ ERRGSNVSLT LDMCTPGCNE EGFGYLMSPR ENSBTAP00000026996/1-539 MDIKLEADPT SLTVKAMGLQ ERRGSNVSLT LDMCTPGCNE EGFGYLMSPR bmy_03635T0/1-504 MDIKLEADPA SLTVKAMGLQ ERRGSNVSLT LDMCTPGCNE EGFGYLMSPR BACU005601/1-593 MDIKLEADPA SLTVKAMGLQ ERRGSNVSLT LDMCTPGCNE EGFGYLMSPR 301 350 ENSTTRP00000013055/1-546 EESAREYLLS ASRVLLAEEL HEKALDPFLL QAEFFEIPMN FVDPKEYNIP ENSP00000351342/1-565 EESAREYLLS ASRVLQAEEL HEKALDPFLL QAEFFEIPMN FVDPKEYDIP ENSBTAP00000026996/1-539 EESAREYLLS ASRVLQAEEL HEKALDPFLL QAEFFEIPMN FVDPKEYDIP bmy_03635T0/1-504 EESAREYLLS ASRVLQAEEL HEKALDPFLL QAEFFEIPMN FVDPKEYDIP BACU005601/1-593 EESAREYLLS ASRVLQAEEL HEKALDPFLL QAEFFEIPMN FVDPKEYDIP 351 400 ENSTTRP00000013055/1-546 GLVRKNRYKT ILPNPHSRVC LTSPDPDDPL SSYINANYIR GYGGEEKVYI ENSP00000351342/1-565 GLVRKNRYKT ILPNPHSRVC LTSPDPDDPL SSYINANYIR GYGGEEKVYI ENSBTAP00000026996/1-539 GLVRKNRYKT ILPNPHSRVC LTSPDPDDPL SSYINANYIR GYGGEEKVYI bmy_03635T0/1-504 GLVRKNRYKT ILPNPHSRVC LTSPDPDDPL SSYINANYIR GYGGEEKVYI BACU005601/1-593 GLVRKNRYKT ILPNPHSRVC LTSPDPDDPL SSYINANYIR GYGGEEKVYI 401 450 ENSTTRP00000013055/1-546 ATQGPIVSTV GDFWRMVWQE HTPIIVMITN IEEMNEKCTE YWPEEQVVYD ENSP00000351342/1-565 ATQGPIVSTV ADFWRMVWQE HTPIIVMITN IEEMNEKCTE YWPEEQVAYD ENSBTAP00000026996/1-539 ATQGPIVSTV GDFWRMVWQE HTPIIVMITN IEEMNEKCTE YWPEEQVVYD bmy_03635T0/1-504 ATQGPIVSTV GDFWRM---- ---------- ------KCTE YWPEEQVVYD BACU005601/1-593 ATQGPIVSTV GDFWRMVWQE HTPIIVMITN IEEMNEKCTE YWPEEQVVYD 451 500 ENSTTRP00000013055/1-546 GVEITVRKVI HTEDYRLRLI ALRSGTEERG LKHYWFTSWP DQKTPDRAPP ENSP00000351342/1-565 GVEITVQKVI HTEDYRLRLI SLKSGTEERG LKHYWFTSWP DQKTPDRAPP ENSBTAP00000026996/1-539 GVEITVRKVI HTEDYRLRLI ALRSGTEERG LKHYWFTSWP DQKTPDRAPP bmy_03635T0/1-504 GVEITVQKVI HTEDYRLRLI ALRSGTEERG LKHYWFTSWP DQKTPDRAPP BACU005601/1-593 GVEITVQKVI HTEDYRLRLI ALRSGTEERG LKHYWFTSWP DQKTPDRAPP 501 550 ENSTTRP00000013055/1-546 LLHLVQEVEE AAQQEGPRCA PIVVHCSAGI GRTGCFIATS ICCQQLRHQG ENSP00000351342/1-565 LLHLVREVEE AAQQEGPHCA PIIVHCSAGI GRTGCFIATS ICCQQLRQEG ENSBTAP00000026996/1-539 LLHLVREVEE AAQQEGPHCA PIVVHCSAGI GRTGCFIATS ICCQQLRQEG bmy_03635T0/1-504 LLHLVQEVEE AAQQEGPRCA PIVVHCSAGI GRTGCFIATS ICCQQLRHEG BACU005601/1-593 LLHLVQEVEE AAQQEGPRCA PIVVHCSAGI GRTGCFIATS ICCQQLRHEG 551 600 ENSTTRP00000013055/1-546 VVDILKTTCQ LRQDRGGMIQ TCEQYQFVHH ---------- ----- ENSP00000351342/1-565 VVDILKTTCQ LRQDRGGMIQ TCEQYQFVHH VMSLYEKQLS HQSPE ENSBTAP00000026996/1-539 VVDILKTTCQ LRQDRGGMIQ TCEQYQFVHH VMSLYEKQLS RQSPE bmy_03635T0/1-504 VVDILKTTCQ LRQDRGGMIQ TCEQYQFVHH VMSLYEKQLS RPSPE BACU005601/1-593 VVDILKTTCQ LRQDRGGMIQ TCEQYQFVHH VMSLYEKQLS RPSPE