KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:31:04 2014 Check: 00 .. Name: ENSP00000305976/1-926 Len: 928 Check: 676 Weight: 1.00 Name: ENSBTAP00000027019/1-906 Len: 928 Check: 3610 Weight: 1.00 Name: ENSTTRP00000009934/1-898 Len: 928 Check: 5103 Weight: 1.00 Name: bmy_11669T0/1-514 Len: 928 Check: 828 Weight: 1.00 Name: BACU019724/1-866 Len: 928 Check: 4711 Weight: 1.00 // 1 50 ENSP00000305976/1-926 MVMADGPRHL QRGPVRVGFY DIEGTLGKGN FAVVKLGRHR ITKTEVAIKI ENSBTAP00000027019/1-906 MVMADGPRHL QRGPVRVGFY EIEGTLGKGN FAVVKLGRHR ITRTEVAIKI ENSTTRP00000009934/1-898 -------RHL QRGPVPGGVY EIEGTLGKGN FAVVKLGRHR ITRTEVAIKI bmy_11669T0/1-514 ---------- ---------- ---------- ---------- ---------- BACU019724/1-866 ---------- ---------- ---------- ---------- VSGMQVAIKI 51 100 ENSP00000305976/1-926 IDKSQLDAVN LEKIYREVQI MKMLDHPHII KLYQVMETKS MLYLVTEYAK ENSBTAP00000027019/1-906 IDKSQLDEVN LEKIYREVKI MKLLDHPHII KLYQVMETKS MLYLVTEYAK ENSTTRP00000009934/1-898 IDKSQLDAVN LEKIYREVQI MKMLDHPHII KLYQVM-TKS MLYLVTEYAK bmy_11669T0/1-514 ---------- ---------- ---------- ---------- ---------- BACU019724/1-866 IDKSQLDAVN LEKIYREVQI MKMLDHPHII KLYQVMETKS MLYLVTEYAK 101 150 ENSP00000305976/1-926 NGEIFDYLAN HGRLNESEAR RKFWQILSAV DYCHGRKIVH RDLKAENLLL ENSBTAP00000027019/1-906 NGEIFDYLAN HGRLNESEAR RKFWQILSAV DYCHGRQIVH RDLKAENLLL ENSTTRP00000009934/1-898 NGEIFDYLAN HGRLNESEAR RKFWQILSAV DYCHGRKIVH RDLKAENLLL bmy_11669T0/1-514 ---------- ---------- ---------- ---------- ---------- BACU019724/1-866 NGEIFDYLAN HGRLNESEAR RKFWQILSAV DYCHGRKIVH RDLKAENLLL 151 200 ENSP00000305976/1-926 DNNMNIKIAD FGFGNFFKSG ELLATWCGSP PYAAPEVFEG QQYEGPQLDI ENSBTAP00000027019/1-906 DNNMNIKIAD FGFGNFFKSG ELLATWCGSP PYAAPEVFEG QQYEGPQLDI ENSTTRP00000009934/1-898 DNNMNIKIAD FGFGNFFKSG ELLATWCGSP PYAAPEVFEG QQYEGPQLDI bmy_11669T0/1-514 ---------- -MFPNF---- ---------- ---------- ---------- BACU019724/1-866 DNNMNIKIAD FGFGNFFKSG ELLATWCGSP PYAAPEVFEG QQYEGPQLDI 201 250 ENSP00000305976/1-926 WSMGVVLYVL VCGALPFDGP TLPILRQRVL EGRFRIPYFM SEDCEHLIRR ENSBTAP00000027019/1-906 WSMGVVLYVL VCGALPFDGP TLPILRQRVL EGRFRIPYFM SEDCEHLIRR ENSTTRP00000009934/1-898 WSMGVVLYVL VCGALPFDGP TLPILRQRVL EGRFRIPYFM SEDCEHLIRR bmy_11669T0/1-514 ---------- -----PF--- ---------- -----LPYL- ---------- BACU019724/1-866 WSMGVVLYVL VCGALPFDGP TLPILRQRVL EGRFRIPYFM SEDCEHLIRR 251 300 ENSP00000305976/1-926 MLVLDPSKRL TIAQIKEHKW MLIEVPVQRP VLYPQEQENE PSIGEFNEQV ENSBTAP00000027019/1-906 MLVLDPAKRL TIAQIKEHKW MLVEVPVQRP VLYPQEQENE PSIGEFNEQV ENSTTRP00000009934/1-898 MLVLDPSKRL TIAQIKEHKW MLVEVPVQRP VLYPQGQENE PSIGEFNEQV bmy_11669T0/1-514 ---------- ---------- ---------- ---------- ---------- BACU019724/1-866 MLVLDPSKRL TIAQIKEHKW MLVEVPVQRP VLYPQGQENE PSIGEFNEQV 301 350 ENSP00000305976/1-926 LRLMHSLGID QQKTIESLQN KSYNHFAAIY FLLVERLKSH RSSFPVEQRL ENSBTAP00000027019/1-906 LRLMHGLGID QQKTIEALQN KSYNHFAAIY YLLVERLKSH RSSFPVEQRL ENSTTRP00000009934/1-898 LRLMHGLGID QQKTIEALQN KSYNHFAAIY YLLVERLKSH RSSFPVEQRL bmy_11669T0/1-514 ---------- ---------- ---------- ---------- ---------- BACU019724/1-866 LRLMHGLGID QQKTIEALQN KSYNHFAAIY YLLVERLKSH RSSFPVEQRL 351 400 ENSP00000305976/1-926 DGRQRRPSTI AEQTVAKAQT VGLPVTMHSP NMRLLRSALL PQASNVEAFS ENSBTAP00000027019/1-906 DARQRRPSTI AEQTVAKAQT VGLPVTVHSP SVRAMRSALL PQASTVDAFA ENSTTRP00000009934/1-898 DARQRRPSTI AEQTVAKTQT VGLPVTVHSP NVRVMRSALL PQASNVDTFT bmy_11669T0/1-514 ---------- ------QTQT VGLPVTVHSP NVRVMRSALL PQASNVDAFT BACU019724/1-866 DARQRRPSTI AEQTVAKTQT VGLPVTVHSP NVRVMRSALL PQASNVDAFT 401 450 ENSP00000305976/1-926 FPASGCQAEA AFMEEECVDT PKVNGCLLDP VPPVLVRKGC QSLPSNMMET ENSBTAP00000027019/1-906 FPTSGCQAEA AFMEEECVDT PKVNGCLLDP VPPILARKGC QSLPSNMMET ENSTTRP00000009934/1-898 FPASGCQAEA AFMEEECVDT PKVNGCLLDP VPPVLARKGC QSLPSDVMET bmy_11669T0/1-514 FPASGCQAEA AFMEEECVDT PKVNGCLLDP VPPVLARKGC QSLPSDVMET BACU019724/1-866 FPASGCQAEA AFMEEECVDT PKVNGCLLDP VPPVLARKGC QSLPSDVMET 451 500 ENSP00000305976/1-926 SIDEGLETEG EAEEDPAHAF EAFQSTRSGQ RRHTLSEVTN QLVVMPGAGK ENSBTAP00000027019/1-906 SIDEGLETEG EAEEDPSQAF DAFQSTRGGQ RRHTLSEVTN QLVVVPGSGK ENSTTRP00000009934/1-898 SIDEGLETEG EAEEDPGRAL GAFQSARGGQ RRHTLSEVTN QLAVMPGSGK bmy_11669T0/1-514 SIDEGLETEG ETEEDPGRAL GALQSTRGGQ RRHTLSEVTN QLAVMPGSGK BACU019724/1-866 SIDEGLETEG EAEEDPGRAL GALQSTRGGQ RRHTLSEVTN QLAVMPGSGK 501 550 ENSP00000305976/1-926 IFSMNDSPSL DSVDSEYDMG SVQRDLNFLE DNPSLKDIML ANQPSPRMTS ENSBTAP00000027019/1-906 IFSMSDNPSL DSVDSEYDMG SVQRDLHFLE DNPSLKDMML ANPPSPRMTS ENSTTRP00000009934/1-898 IFSMSDNPSL DSVDSEYDMG SVQRDLHFLE DNPSLKDIML ANQPSPRMTS bmy_11669T0/1-514 IFSVRDNPSL DSVDSEYDMG SVQRDLHFLE DKPSLKDIML AHQPSPRMTS BACU019724/1-866 IFSVRDNPSL DSVDSEYDMG SVQRDLHFLE DKPSLKDIML AHQPSPRMTS 551 600 ENSP00000305976/1-926 PFISLRPTNP AMQALSSQKR EVHNRSPVSF REGRRASDTS LTQGIVAFRQ ENSBTAP00000027019/1-906 PFVSLRPANP AMQALSAQKR EAHNRSPVSF REGRRASDTS LTQGIVAFRQ ENSTTRP00000009934/1-898 PFVSLRPANP TMQALSSQKR EAHNRSPVSF REGRRASDTS LTQGIVAFRQ bmy_11669T0/1-514 PFVSLRPANP TMQALSSQKR EAHNRSPVSF REGRRASDTS LTQGIVAFRQ BACU019724/1-866 PFVSLRPANP TMQALSSQKR EAHNRSPVSF REGRRASDTS LTQGIVAFRQ 601 650 ENSP00000305976/1-926 HLQNLARTKG ILELNKVQLL YEQIGPEADP NLAPAAPQLQ DLASSCPQEE ENSBTAP00000027019/1-906 HLQNLARTKG ILELNKVQLL YEQMGSEADP SLASPAAQLQ DLASSCPQEE ENSTTRP00000009934/1-898 HLQNLARTKG ILELNKVQLL YEQLGSEADP NLASPAPQLQ DLGSSCPQGE bmy_11669T0/1-514 HLQNLARTKG ILELNKVQLL YEQIGSEADA NLASPAPQLQ DLGSSCP--- BACU019724/1-866 HLQNLARTKG ILELNKVQLL YEQIGSEADP NLASPAPQLQ DLGSSCPQEE 651 700 ENSP00000305976/1-926 VSQQQESVST LP-ASVHPQL SPRQSLETQY LQHRLQKPSL LSKAQNTCQL ENSBTAP00000027019/1-906 APPQQKSVSA LPGGSAHPQL SQRHSLEAQY LQHRLQKPSL LSKAQNTCQL ENSTTRP00000009934/1-898 APPQQKSVSA LP-GSAHPQL SQRHSLEAQY LQHRLQKPSL LSKAQNTCQL bmy_11669T0/1-514 ---------- ---------- ---------- -----QKPSL LSKAQNTCQL BACU019724/1-866 APPQQKSVSA LP-GSAHPQL SQRHSLEAQY LQHRLQKPSL LSKAQNTCQL 701 750 ENSP00000305976/1-926 YCKEPPRSLE QQLQEHRLQQ KRLFLQKQSQ LQAYFNQMQI AESSYPQPSQ ENSBTAP00000027019/1-906 YCKEPPRSLE QQLQEHRLQQ KRLFLQKQSQ LQAYFNQMQI AESSYPQ--- ENSTTRP00000009934/1-898 YCKEPPRSLE QQLQEHRLQQ KRLFLQKQSQ LQAYFNQMQI AESSYPQ--- bmy_11669T0/1-514 YCKEPPRSLE QQLQEHRLQQ KRLFLQKQSQ LQAYFNQMQI AESSYPQ--- BACU019724/1-866 YCKEPPRSLE QQLQEHRLQQ KRLFLQKQSQ LQAYFNQMQI AESSYPQ--- 751 800 ENSP00000305976/1-926 QLPLPRQETP P-PSQQAPPF SLTQPLSPVL EPSSEQMQYS PFLSQYQEMQ ENSBTAP00000027019/1-906 --PLPHQETP PQPSQPPPPF SLTQPLSPVL EPASEHMPFS PFLSPYPEMR ENSTTRP00000009934/1-898 --PLPHQETP P-PSQQPPPF SLTQPLSPVL EPASEQMQYS PFLSQYREMG bmy_11669T0/1-514 --PLPHQETP P-PSQQPPPF SLTQPLSPVL EPASEQMQYS PFLTQYREMG BACU019724/1-866 --PLPHQETP P-PSQQPPPF SLTQPLSPVL EPASEQMQYS PFLSQYREMG 801 850 ENSP00000305976/1-926 LQPLPSTSGP RAAPPLPTQL QQQQPPPPPP PPPPRQPGAA PAPLQFSYQT ENSBTAP00000027019/1-906 LQPLPASPGA RGAP------ ---------P PPPPP-SGGA PAPLQF-YQT ENSTTRP00000009934/1-898 LQPLSASPGP RAAP------ ---------P PPPPQHSGAA RAPLQFSYQT bmy_11669T0/1-514 LQPLSASPGP RAAP------ ---------P PPPPQHSGAA RAPLPFSYQT BACU019724/1-866 LQPLSASPGP RAAP------ ---------P PPPPPHSGAA RAPLPFSYQT 851 900 ENSP00000305976/1-926 CELPSAASPA PDYPTPCQYP VDGAQQSDLT GPDCPRSPGL QEAPSSYDPL ENSBTAP00000027019/1-906 CELPGAATPE PEHPTPGQYP ADGTPQSSMD GPDCPRSSGL QEAPSGYDPL ENSTTRP00000009934/1-898 CELPGAASPE PDRPGPCQYS LDGAQQSGLA APGCPRSSGL QEAPSSYDPL bmy_11669T0/1-514 CELPGAASPE PDRPAPCQYS LDGAQQSDMA APGCPRSSGL QEAPSSYDPL BACU019724/1-866 CELPGAASAE PDRPAPCQYS LDGAQQSGMA APGCPRSSGL QEAPSSYDPL 901 950 ENSP00000305976/1-926 ALSELPGLFD CEMLDAVDPQ HNGYVLVN ENSBTAP00000027019/1-906 ALSEFPGLFD CEMLEAVDPQ HSGYVLVN ENSTTRP00000009934/1-898 ALSEFPGLFD CEMLEAVDPQ HSGYVLVN bmy_11669T0/1-514 ALSEFPGLFD CEMLEAVDPQ HSGYVLVN BACU019724/1-866 ALSEFPGLFD CEMLEAVDPQ HSGYVLVN