KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:31:05 2014 Check: 00 .. Name: ENSP00000296522/1-266 Len: 360 Check: 7883 Weight: 1.00 Name: ENSBTAP00000027024/1-266 Len: 360 Check: 8110 Weight: 1.00 Name: BACU015241/1-203 Len: 360 Check: 1472 Weight: 1.00 Name: ENSTTRP00000009917/1-266 Len: 360 Check: 6836 Weight: 1.00 Name: bmy_07421T0/1-360 Len: 360 Check: 7075 Weight: 1.00 // 1 50 ENSP00000296522/1-266 ---------- ---------- ---------- ------MHVN GKVALVTGAA ENSBTAP00000027024/1-266 ---------- ---------- ---------- ------MHVN GKVALVTGAA BACU015241/1-203 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000009917/1-266 ---------- ---------- ---------- ------MHVN GKAALVTGAA bmy_07421T0/1-360 RPLAGERGRA ARARAGSLKA AAARRRRARP PRAGGDMHVN GKVALVTGAA 51 100 ENSP00000296522/1-266 QGIGRAFAEA LLLKGAKVAL VDWNLEAGVQ CKAALDEQFE PQKTLFIQCD ENSBTAP00000027024/1-266 QGIGRAFAEA LLLKGAKVAL VDWNLEAGVK CKAALDEQFE PQKTLFIQCD BACU015241/1-203 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000009917/1-266 QGIGRASAEA LLLKGAKVAL VDCNREAGLK CKAALDEQFE PQKTLFIQCD bmy_07421T0/1-360 QGIGRASAEA LLLKGAKVAL VDWNREAGLK CKAALDEQFE PQKTLFIQCD 101 150 ENSP00000296522/1-266 VADQQQLRDT FRKVVDHFGR LDILVNNAGV NNEKNWEKTL QINLVSVISG ENSBTAP00000027024/1-266 VADQEQLRDT FRKVVDHFGK LDILVNNAGV NNEKNWEKTL QINLVSVISG BACU015241/1-203 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000009917/1-266 VADQEQLRDT FRKVVDHFGK LDILVNNAGV NNEKNWEKTL QINLVSVISG bmy_07421T0/1-360 VADQEQLRDT FRKVVDHFGK LDILVNNAGV NNEKNWEKTL QINLVSVISG 151 200 ENSP00000296522/1-266 TYLGLDYMSK QNGGEGGIII NMSSLA---- ---------- ---------- ENSBTAP00000027024/1-266 TYLGLDYMSK QNGGEGGIII NMSSLA---- ---------- ---------- BACU015241/1-203 -------MSK QNGGEGGIII NMSSLAVYIV QRLNVHYLDL NWSDVNGYEY ENSTTRP00000009917/1-266 TYLGLDYMSK QNGGEGGIII NMSSLA---- ---------- ---------- bmy_07421T0/1-360 TYLGLDYMSK QNGGEGGIII NMSSLAVYIL QRLNLHYLDL NWSDVNGYEY 201 250 ENSP00000296522/1-266 ---------- ---------- ---------- ----GLMPVA QQPVYCASKH ENSBTAP00000027024/1-266 ---------- ---------- ---------- ----GLMPVA QQPVYCASKH BACU015241/1-203 VGHLPCLVPA KVFVVSVLLS YGLKLLRRHT RKGIRLMPVA QQPVYCASKH ENSTTRP00000009917/1-266 ---------- ---------- ---------- ----GLMPVA QQPVYCASKH bmy_07421T0/1-360 VGHLPRLVPA KVFVVSVLLS YGLKLLRRHT RKGIRLMPVA QQPVYCASKH 251 300 ENSP00000296522/1-266 GIVGFTRSAA LAANLMNSGV RLNAICPGFV NTAILESIEK EENMGQYIEY ENSBTAP00000027024/1-266 GIVGFTRSAA MAANLMNSGV RLNAICPGFV DTPILKSIEK EENMGKYIEY BACU015241/1-203 GIIGFTRSAA MAANLMDSGV RLNAICPGFV NTPILKSIEK EENMGQYIEY ENSTTRP00000009917/1-266 GIIGFTRSAA MAANLMNSGV RLNAICPGFV NTPILKSIEN EENMGQYIEY bmy_07421T0/1-360 GIVGFTRSAA MAANLMNSGV RLNAICPGFV NTPILKSIEK EENMGQYIEY 301 350 ENSP00000296522/1-266 KDHIKDMIKY YGILDPPLIA NGLITLIEDD ALNGAIMKIT TSKGIHFQDY ENSBTAP00000027024/1-266 MGPIKDMMKY YGILDPSMIA NGLITLIEDD ALNGAIMKIT TSKGIHFQDY BACU015241/1-203 TDHIKDMMKY YGILDPSMIA NGLITLIEDD TLNGAIMKIT TSKGIHFQDY ENSTTRP00000009917/1-266 TDHIKDMMKY YGILDPSMIA SGLITLIEDD TLNGAIMKIT TAKGIHFQDY bmy_07421T0/1-360 TDHIKDMMKY YGILDPSMIA NGLITLIEDD ALNGAIMKIT TSKGIHFQDY 351 400 ENSP00000296522/1-266 DTTPFQAKTQ ENSBTAP00000027024/1-266 DTTPFHMKMQ BACU015241/1-203 DTTPFHTKAQ ENSTTRP00000009917/1-266 DTTPFHTKAQ bmy_07421T0/1-360 DTTPFHTKAQ