KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:31:05 2014 Check: 00 .. Name: ENSP00000358596/1-384 Len: 444 Check: 3868 Weight: 1.00 Name: bmy_02806T0/1-350 Len: 444 Check: 3138 Weight: 1.00 Name: ENSBTAP00000027029/1-444 Len: 444 Check: 2724 Weight: 1.00 Name: BACU004636/1-262 Len: 444 Check: 2057 Weight: 1.00 Name: ENSTTRP00000007471/1-384 Len: 444 Check: 2671 Weight: 1.00 // 1 50 ENSP00000358596/1-384 ---------- ---------- ---------- ---------- ---------- bmy_02806T0/1-350 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000027029/1-444 RVARPGAERA GRERRVERPL RRRARSAGRS PVGSSSWASP AGTLAVGTCG BACU004636/1-262 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000007471/1-384 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000358596/1-384 ---------- MKVTSLDGRQ LRKMLRKEAA ARCVVLDCRP YLAFAASNVR bmy_02806T0/1-350 ---------- ---------- ---MLRKEAA ARCVVLDCRP YLAFAASSVR ENSBTAP00000027029/1-444 AHGAGPLGGG MKVTSLDGRQ LRKMLRKEAA ARCVVLDCRP YLAFAASSVR BACU004636/1-262 ---------- ---------- ---------- -FCLL----- ---------- ENSTTRP00000007471/1-384 ---------- MKVTSLDGRQ LRKMLRKEAA ARCVVLDCRP YLAFAASSVR 101 150 ENSP00000358596/1-384 GSLNVNLNSV VLRRARGGAV SARYVLPDEA ARARLLQEGG GGVAAVVVLD bmy_02806T0/1-350 GSLNVNLNSV VLRRARGGAV SARYVLPDEA ARARLLQEGG GGVAAVVVLD ENSBTAP00000027029/1-444 GSLNVNLNSV VLRRARGGAV SARYVLPDEA ARARLLQEGG GGVAAVVVLD BACU004636/1-262 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000007471/1-384 GSLNVNLNSV VLRRARGGAV SARYVLPDEA ARARLLQEGG GGVAAVVVLD 151 200 ENSP00000358596/1-384 QGSRHWQKLR EESAARVVLT SLLACLPAGP RVYFLKGGYE TFYSEYPECC bmy_02806T0/1-350 QGSRHWQKLR EESAARVVLT SLLACLPAGP RVYFLKG--- -------ERV ENSBTAP00000027029/1-444 QGSRHWQKLR EESAARVVLT SLLACLPAGP RVYFLKGGYE TFYSEYPECC BACU004636/1-262 ---------- ---------- ---------- ------GGYE TFHSEYPECC ENSTTRP00000007471/1-384 QGSRHWQKLR EESAARVVLT SLLACLPAGP RVYFLKGGYE TFHSEYPECC 201 250 ENSP00000358596/1-384 VDVKPISQEK IESERALISQ CGKPVVNVSY RPAYDQGGPV EILPFLYLGS bmy_02806T0/1-350 GDAGPLLPSA PGRPRAL--- --------GY RPAYDQGGPV EILPFLYLGS ENSBTAP00000027029/1-444 VDVKPISQEK VETERALISQ CGKSVLNISY RPAYDQGGPV EILPFLYLGS BACU004636/1-262 VDVKPISPEK AETETALISQ CGKSVLNISY RPAYDQGGPV EILPFLYLGS ENSTTRP00000007471/1-384 VDVKPISPEK VETETALISQ CGKSVLNISY RPAYDQGGPV EILPFLYLGS 251 300 ENSP00000358596/1-384 AYHASKCEFL ANLHITALLN VSRRTSEACA THLHYKWIPV EDSHTADISS bmy_02806T0/1-350 AYHASKCEFL ANLHITALLN VSRRTSEACT THLHYKWIPV EDSHAANISS ENSBTAP00000027029/1-444 AYHASKCEFL ANLHITALLN VSRRTSEACT MHLHYKWIPV EDSNAADISS BACU004636/1-262 AYHASKCEFL ANLHITALLN VSRRTSEACT THLHYKWIPV EDSHAANISS ENSTTRP00000007471/1-384 AYHASKCEFL ANLHITALLN VSRRTSEACT THLHYKWIPV EDSHAANISS 301 350 ENSP00000358596/1-384 HFQEAIDFID CVREKGGKVL VHCEAGISRS PTICMAYLMK TKQFRLKEAF bmy_02806T0/1-350 HFQEAIDFID CVREKGGKVL VHCEAGISRS PTICMAYLMK TKQFHLKDAF ENSBTAP00000027029/1-444 HFQEAIDFID CVREKGGKVL VHCEAGISRS PTICMAYLMK TKQFHLKEAF BACU004636/1-262 HFQEAIDFID CVREKGGKVL VHCEAGISRS PTICMAYLMK TKQFHLKDAF ENSTTRP00000007471/1-384 HFQEAIDFID CVREKGGKVL VHCEAGISRS PTICMAYLMK TKQFHLKDAF 351 400 ENSP00000358596/1-384 DYIKQRRSMV SPNFGFMGQL LQYESEILPS TPNPQPPSCQ GEAAGSSLIG bmy_02806T0/1-350 DYIKQRRSVV SPNFSFMGQL LQYESEILPS TPSPQAPSSQ GEAAGPSFIA ENSBTAP00000027029/1-444 DYIKQRRSVV SPNFGFMGQL LQYESEILPS APAPQAPSCQ GEAAGPSFLA BACU004636/1-262 DYIKQRRSVV SPNFSFMGQL LQYESEILPS TPSPQAPSSQ GEAAGPSFIA ENSTTRP00000007471/1-384 DYIKQRRSVV SPNFSFMGQL LQYESEILPC APSPQAPSSQ GEAAGPSFIA 401 450 ENSP00000358596/1-384 HLQTLSPDMQ GAYCTFPASV LAPVPTHSTV SELSRSPVAT ATSC bmy_02806T0/1-350 HLQTLSPEVQ GSYCTFPTSV LAPLPTHSTV SELSQSPMAT ATSC ENSBTAP00000027029/1-444 HLQTLSPDVQ ASYCTFPTSV LAPVPTHSTA SELSQSPLAT ATSC BACU004636/1-262 HLQTLSPEVQ GSYCTFPTSV LAPLPTHSKV SELSQSPMAT ATSC ENSTTRP00000007471/1-384 HLQTLSPDVQ GSYCTFPTSV LAPLPTHSTV SELSQSPMAT ATSC