KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:31:06 2014 Check: 00 .. Name: ENSP00000269209/1-876 Len: 999 Check: 978 Weight: 1.00 Name: ENSBTAP00000027036/1-784 Len: 999 Check: 2399 Weight: 1.00 Name: bmy_13028T0/1-999 Len: 999 Check: 9504 Weight: 1.00 Name: ENSTTRP00000010374/1-806 Len: 999 Check: 9870 Weight: 1.00 // 1 50 ENSP00000269209/1-876 MDPAPSLGCS LKDVKWSSVA VPLDLLVSTY RLPQIARLDN GECVEGLREN ENSBTAP00000027036/1-784 ---------- ---------- ---------- ---------- ---------- bmy_13028T0/1-999 MDPAPSLGCS LKDVKWSSVA VPLDLLVSTY RLPQIARLDS GECIEGLREN ENSTTRP00000010374/1-806 ---------- ---------- ---------- ---------- -ECIEGMREN 51 100 ENSP00000269209/1-876 DYLLIHSCRQ WTTITAHSLE EGHYVIGPKI EIPVHYA--- ---------- ENSBTAP00000027036/1-784 ---------- ---------- ---------- ---------- ---------- bmy_13028T0/1-999 DYLLIHSCRQ WTTITAHSLE EGHYVIGPKI EIPVHYAAVG VDFIEKGGTY ENSTTRP00000010374/1-806 DYLLIHSCRQ WPTITAHSLE EGHYVIGPKI EIPVHYA--- ---------- 101 150 ENSP00000269209/1-876 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000027036/1-784 ---------- ---------- ---------- ---------- ---------- bmy_13028T0/1-999 SYRKYYDCEI GSQAKGAENE TDPPPAQSLL PVVPQQREPF GSRWGQPLAT ENSTTRP00000010374/1-806 ---------- ---------- ---------- ---------- ---------- 151 200 ENSP00000269209/1-876 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000027036/1-784 ---------- ---------- ---------- ---------- ---------- bmy_13028T0/1-999 SCTFEMLPNV TQKLAYGKGL KQTSRDMYEV VSTYEALSAK HRTELFPGPI ENSTTRP00000010374/1-806 ---------- ---------- ---------- ---------- ---------- 201 250 ENSP00000269209/1-876 ---------- GQFKLLEQDR DIKEPVQYFN SVEEVAKAFP ERVYVMEDIT ENSBTAP00000027036/1-784 ---------- -QFKLLEQDR DIKEPVQYFN SVEEVAKAFP ERVYVMEEIT bmy_13028T0/1-999 PLRPHSFLSG GQFKLLEQDR DIKEPVQYFN SVEEVAKAFP ERVYVMEEIT ENSTTRP00000010374/1-806 ---------- GQFKLLEQDR DIKEPVQYFN SVEEVAKAFP ERVYVMEEIT 251 300 ENSP00000269209/1-876 FNVKVASGEC NEDTEVYNIT LCTGDELTLM GQAEILYAKT FKEKSRLNTI ENSBTAP00000027036/1-784 FNVKVASGEC NEDTEVYNIT LCTGDELTLM GQAEILYAKT FKEKSRLNTI bmy_13028T0/1-999 FNVKVASGEC NEDTEVYNIT LCTGDELTLM GQAEILYAKT FKEKSRLNTI ENSTTRP00000010374/1-806 FNVKVASGEC NEDTEVYNIT LCTGDELTLM GQAEILYAKT FKEKSRLNTI 301 350 ENSP00000269209/1-876 FKKIGKLNSI SKLGKGKMPC LICMNHRTNE SISLPFQCKG RFSTRSPLEL ENSBTAP00000027036/1-784 FKKIGKLNSI SKLGKGKMPC LICMNHRTNE SISLPFQCKG RFSTRSPLEL bmy_13028T0/1-999 FKKIGKLNSI SKLGKGKMPC LICMNHRTNE SISLPFQCKG RFSTRSPLEL ENSTTRP00000010374/1-806 FKKIGKLNSI SKLGKGKMPC LICMNHRTNE SISLPFQCKG RFSTRSPLEL 351 400 ENSP00000269209/1-876 QMQEGEHTIR NIVEKTRLPV NVTVPSPPPR NPYDLHFIRE GHRYKFVNIQ ENSBTAP00000027036/1-784 QMQEGEHTIR NIVEKTRLPV NVTVPSPPPR NPYDLHFIRE GHRYKFVNIQ bmy_13028T0/1-999 QMQEGEHTIR NIVEKTRLPV NVTVPSPPPR NPYDLHFIRE GHRYKFVNIQ ENSTTRP00000010374/1-806 QMQEGEHTIR NIVEKTRLPV NVTVPSPPPR NPYDLHFIRE GHRYKFVNIQ 401 450 ENSP00000269209/1-876 TKTVVVCCVL RNNKILPMHF PLHLTVPKFS LPEHLVKGES WPETLVHHWL ENSBTAP00000027036/1-784 TKTVVVCCVL RNNKILPMHF PLHLTVPKFS LPEHLVKGEG WPETLVHHWL bmy_13028T0/1-999 TKTVVVCCVL RNNKILPMHF PLHLTVPKFS LPEHLVKGEV WPETLVHHWL ENSTTRP00000010374/1-806 TKTVVVCCVL RNNKILPMHF PLHLTVPKFS LPEHLVKGEV WPETLVHHWL 451 500 ENSP00000269209/1-876 GICQEQFDID EYSRAVRDVK TDWNEECKSP KKGRCSGHNH VPNSLSYARD ENSBTAP00000027036/1-784 GICQEQFDID EYSRAVRDVK TDWNEDCKSP KKGRCAGHNH VPNSLSYARD bmy_13028T0/1-999 GICQEQFDID EYSRAVRDVK TDWNEDCKSP KKGRCTGHNH VPNSLSYARD ENSTTRP00000010374/1-806 GICQEQFDID EYSRAVRDVK TDWNEDCKSP KKGRCTGHNH VPNSLSYARD 501 550 ENSP00000269209/1-876 ELTQSFHRLS VCVYGNNLHG NSEVNLHGCR DLGGDWAPFP HDILPYQDSG ENSBTAP00000027036/1-784 ELTQSFHRLS VCVYGNNLHG NSEVNLHGCR DLGGEWAPFP HDILPYQDSG bmy_13028T0/1-999 ELTQSFHRLS VCVYGNNLHG NSEVNLHGCR DLGGEWAPFP HDILPYQDSG ENSTTRP00000010374/1-806 ELTQSFHRLS VCVYGNNLHG NSEVNLHGCR DLGGEWAPFP HDILPYQDSG 551 600 ENSP00000269209/1-876 DSGSDYLFPE ASEESAGIPG KSELPYEELW LEEGKPSHQP LTRSLSEKNR ENSBTAP00000027036/1-784 DSGSDYLFPE AGEESAGMAG KSELPYEELW LEEGKPSHQP LTRSLSEKSR bmy_13028T0/1-999 DSGSDYLFPE ASEESVGIPG KSELPYEELW LEEGKPSHQP LTRSLSEKSR ENSTTRP00000010374/1-806 DSGSDYLFPE ASEESVGITG KSELPYEELW LEEGKPSHPP LTRSLSEKSR 601 650 ENSP00000269209/1-876 CDQFRGSVRS KCATSPLPIP GTLGAAVKSS DTALPPPPVP PKSEAVREEC ENSBTAP00000027036/1-784 CDQFRGSVRS KCATSPLPVP GALGAAVKSA EIALPPPPVP PKSEAVREEC bmy_13028T0/1-999 CDQFRGSVRS KCAPSPLPVP GTLGAAMKSS EIALPPPPVP PKSEAVREEC ENSTTRP00000010374/1-806 CDQFRGSIRS KCAPSPLPVP GTLGAAMKSS EIALPPPPVP PKSEAVREEC 651 700 ENSP00000269209/1-876 RLLNAPPVPP RSAKPLSTSP SIPPRTVKPA RQQTRSPSPT LSYYSSGLHN ENSBTAP00000027036/1-784 RLLNAPPVPP RSAKPQSTSP SVPPRTAKPA RPQTRSPSPT LSYYSSGLHD bmy_13028T0/1-999 RLLNAPPVPP RSAKPQSTSP SVPPRTAKPV RQQTRSPSPT LSYYSSGLHD ENSTTRP00000010374/1-806 RLLNAPPVPP RSAKPQSTSP SVPPRTAKPA RQQTRSPSPT LSYYSSGLHD 701 750 ENSP00000269209/1-876 ISVTKTDTNP SESTPVSCYP CNRVKTDSVD LKSPFGSPSA EAVSSRLSWP ENSBTAP00000027036/1-784 ISVTKSETSP PESAPVSCYP CNRVKADSGD PKSPCGSPPS EALSSRLSWP bmy_13028T0/1-999 ISVTKSDMSP PESAPVSCYP CTRVKADSMD PKSPFGSPTA EALSSRLSWP ENSTTRP00000010374/1-806 ISITKSDTSP PESAPVSCYP CNRLKADSMD PKSPFGSPTA EALSSRLSWP 751 800 ENSP00000269209/1-876 NHYSGASESQ TRSDFLLDPS RSYSYPRQKT PGTPKRNCPA PFDFDGCELL ENSBTAP00000027036/1-784 NHYSGASETH TRSDFLLDPS RSYSYPRQKT PGTPKRNCPA AFELDGRELA bmy_13028T0/1-999 NHYSGASETQ TRSDFLLDPS RSYSYPRQKT PGTPKRNCPA AFDLDGHELA ENSTTRP00000010374/1-806 NHYSGVSETQ TRSDFLLDPS RSYSYPRQKT PGTPKRNCPA AFDLDGHELA 801 850 ENSP00000269209/1-876 ASPTSPVTAE FSSSVSGCPK SASYSLESTD VKSLAAGVTK QSTSCPALPP ENSBTAP00000027036/1-784 TSPPVPGPAE PA----GCPK SASYCLERSG DRSLAGGPAK QSSSCPALPP bmy_13028T0/1-999 ASPPGPRPTE PGGSAPGCPK SASYSLESTG GKTLTAGPAK QSISCPALPP ENSTTRP00000010374/1-806 ASPPGPGPTE PGGSAPGCPK SASYSLESTG GKTLTAAPAK QSISCPALPP 851 900 ENSP00000269209/1-876 RAPKLVEEKV ASETSPLPLK IDGAEEDPKS GSPDLSEDQY FVKKGMQDIF ENSBTAP00000027036/1-784 RAPRPLEEKA APDTPPLPLQ IDGAEEAPKS GSPDLSEDAY FIQKGAQDLL bmy_13028T0/1-999 RAPRPVEEKA ALDTLPLPLQ IDGAEEDPES GSPDLSEDPY FVQKGTQDIF ENSTTRP00000010374/1-806 RAPRPVEEKA ALDTLPLPLQ IDGAEEAPES GSPDLSEDPY FVQKGTQDIF 901 950 ENSP00000269209/1-876 SASYPFSSPL HLQLAPRSCG DGSPWQPPAD LSGLSIEEVS KSLRFIGLSE ENSBTAP00000027036/1-784 STPYPFSSPI HLQLAPRSCG DGSPWQPPAD LSGLSVEEVS KSLRFIGLSE bmy_13028T0/1-999 SVSYPFSSPL HLQLAPRSCG DGSPWQPPAD LSGLSIEEVS KSLRFIGLSE ENSTTRP00000010374/1-806 SMSYPFSSPL HLQLAPRSCG DGSPWQPPAD LSGLSIEEVS KSLRFIGLSE 951 1000 ENSP00000269209/1-876 DVISFFVTEK IDGNLLVQLT EEILSEDFKL SKLQVKKIMQ FINGWRPKI ENSBTAP00000027036/1-784 DVIVFFVTEK IDGNLLVQLT EEILSEDFKL SKLQVKKILQ FINGWRPKI bmy_13028T0/1-999 DVIAFFVTEK IDGNLLVQLT EEILSEDFKL SKLQVKKILQ FINGWRPKI ENSTTRP00000010374/1-806 DVIAFFVTEK IDGNLLVQLT ---------- ---------- ---------