KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:31:16 2014 Check: 00 .. Name: bmy_04485T0/1-626 Len: 1328 Check: 5718 Weight: 1.00 Name: ENSTTRP00000008025/1-1253 Len: 1328 Check: 7337 Weight: 1.00 Name: ENSP00000373734/1-1274 Len: 1328 Check: 6055 Weight: 1.00 Name: BACU006097/1-1234 Len: 1328 Check: 3499 Weight: 1.00 Name: ENSBTAP00000027075/1-1237 Len: 1328 Check: 3368 Weight: 1.00 // 1 50 bmy_04485T0/1-626 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000008025/1-1253 ---------- ---------- ---------- ---------- ---------- ENSP00000373734/1-1274 MSGSCAAPGP GSGSSPAACR FAHYFVLCGI DADSGLEPDE LAGENFDQSP BACU006097/1-1234 ---------- ---------- ---------- ---------- VVGENFDQSP ENSBTAP00000027075/1-1237 ---------- ---------- ---------- ---------- VVGENFDQSP 51 100 bmy_04485T0/1-626 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000008025/1-1253 ---------- -----LYQWL EADRHGKSQG AANTTSXXXX XXXXXXXXXX ENSP00000373734/1-1274 LRRTFKSKVL AHYPQNIEWN PFDQDAVNM- ---------- ---------- BACU006097/1-1234 LRRTFKSKVL AHYPQNIEWN PFDQDAVNM- ---------- ---------- ENSBTAP00000027075/1-1237 LRRTFKSKVL AHYPQNIEWN PFDQDAVNM- ---------- ---------- 101 150 bmy_04485T0/1-626 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000008025/1-1253 XXXXXXXXXX XXXXXXXXXX XXXLCMPKGL SFRTQTDNKD PQFHSFIITR ENSP00000373734/1-1274 ---------- ---------- ---LCMPKGL SFRTQTDNKD PQFHSFIITR BACU006097/1-1234 ---------- ---------- ---LCMPKGL SFRTQTDNKD PQFHSFIITR ENSBTAP00000027075/1-1237 ---------- ---------- ---LCMPKGL SFRTQTDNKD PQFHSFIITR 151 200 bmy_04485T0/1-626 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000008025/1-1253 EDGSRTYGFV LTFYEEVTSK QICTAMQTLY QMHNAEHYSS LYASSSCSMD ENSP00000373734/1-1274 EDGSRTYGFV LTFYEEVTSK QICTAMQTLY QMHNAEHYSS VYASSSCSMD BACU006097/1-1234 EDGSRTYGFV LTFYEEVTSK QICTAMQTLY QMHNAEHYSS LYASSSCSMD ENSBTAP00000027075/1-1237 EDGSRTYGFV LTFYEEVTSK QICTAMQTLY QMHNAEHYSS VYASSSCSMD 201 250 bmy_04485T0/1-626 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000008025/1-1253 SLASSIDEGD TTSLLKLQRY NSYDISRDTL YVSKSICLIT PLPFMQACKK ENSP00000373734/1-1274 SLASSLDEGD TTSLLKLQRY NSYDISRDTL YVSKSICLIT PLPFMQACKK BACU006097/1-1234 SLASSIDEGD TTSLLKLQRY NSYDISRDTL YVSKSICLIT PLPFMQACKK ENSBTAP00000027075/1-1237 SLASSIDEGD TTSLLKLQRY NSYDISRDTL YVSKSICLIT PLPFMQACKK 251 300 bmy_04485T0/1-626 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000008025/1-1253 FLIQLYKAVT SQQPPPLPLE SYIHNILYEV PLPPPGRSLK FYGVYEPVIC ENSP00000373734/1-1274 FLIQLYKAVT SQQPPPLPLE SYIHNILYEV PLPPPGRSLK FYGVYEPVIC BACU006097/1-1234 FLIQLYKAVT SQQPPPLPLE SYIHNILYEV PLPPPGRSLK FYGVYEPVIC ENSBTAP00000027075/1-1237 FLIQLYKAVT SQQPPPLPLE SYIHNILYEV PLPPPGRSLK FYGVYEPVIC 301 350 bmy_04485T0/1-626 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000008025/1-1253 QRPGPSELPL SDYPLREVFE LLGLENLVQV FTCVLLEMQI LLYSQDYQRL ENSP00000373734/1-1274 QRPGPSELPL SDYPLREAFE LLGLENLVQV FTCVLLEMQI LLYSQDYQRL BACU006097/1-1234 QRPGPSELPL SDYPLREVFE LLGLENLVQV FTCVLLEMQI LLYSQDYQRL ENSBTAP00000027075/1-1237 QRPGLNELPL SDYPLREVFE LLGLENLVQV FTCVLLEMQI LLYSQDYQRL 351 400 bmy_04485T0/1-626 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000008025/1-1253 MTVAEGITTL LFPFQWQHVY VPILPASLLH FLXXXXXXXX XXXXXXXXXX ENSP00000373734/1-1274 MTVAEGITTL LFPFQWQHVY VPILPASLLH FLDAPVPYLM GLQSKEGTDR BACU006097/1-1234 MTVAEGITTL LFPFQWQHVY VPILPASLLH FLDAPVPYLM GLQSKEGTDR ENSBTAP00000027075/1-1237 MTVAEGITTL LFPFQWQHVY VPILPASLLH FLDAPVPYLM GLQSKEGTDR 401 450 bmy_04485T0/1-626 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000008025/1-1253 SKLELPQEAN LCFVDIDNHF IELPEEFPQF PNKVDFIQEL SEILLQFGIP ENSP00000373734/1-1274 SKLELPQEAN LCFVDIDNHF IELPEEFPQF PNKVDFIQEL SEVLVQFGIP BACU006097/1-1234 SKLELPQEAN LCFVDIDNHF IELPEEFPQF PNKVDFIQEL SEILLQFGIP ENSBTAP00000027075/1-1237 SKLELPQEAN LCFVDIDNHF IELPEEFPQF PNKVDFIQEL SEVLLQFGIP 451 500 bmy_04485T0/1-626 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000008025/1-1253 PEGSLHCSES ATKLKNLVLK DLVNDKKNGN VSANNISMYE LLKGNETIAR ENSP00000373734/1-1274 PEGSLHCSES TSKLKNMVLK DLVNDKKNGN VCTNNISMYE LLKGNETIAR BACU006097/1-1234 PEGSLHCSES ATKLKNLVLK DLVNDKKNGN VSANNISMYE LLKGNETIAR ENSBTAP00000027075/1-1237 PEGSLHCSES ATKLKNLVLK DLVNDKKNGN VSANSISMYE LLKGNETIAR 501 550 bmy_04485T0/1-626 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000008025/1-1253 LQALAKRTGV TMEKMDLSAS LSEKEKDLKL QCEEAELRDY QLNVQLREVF ENSP00000373734/1-1274 LQALAKRTGV AVEKMDLSAS LGEKDKDLKL HCEEAELRDY QLNVQLREVF BACU006097/1-1234 LQALAKRTGV TMEKMDLSAS LSEKEKDLKL QCEEAELRDY QLNVQLREVF ENSBTAP00000027075/1-1237 LQALAKRTGV TMEKMDLSAS LSEKEKDLKL QCEDAELRDY QLNVQLREVF 551 600 bmy_04485T0/1-626 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000008025/1-1253 ANRFTQMFAD YEAFVIQTAQ DMESWLTNRE QMQNFDKASF LSDQPEPYLP ENSP00000373734/1-1274 ANRFTQMFAD YEAFVIQTAQ DMESWLTNRE QMQNFDKASF LSDQPEPYLP BACU006097/1-1234 ANRFTQMFAD YEAFVIQTAQ DMESWLTNRE QMQNFDKASF LSDQPEPYLP ENSBTAP00000027075/1-1237 ANRFTQMFAD YEAFVIQTAQ DLESWLTNRE QMQNFDKASF LSDQPEPYLP 601 650 bmy_04485T0/1-626 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000008025/1-1253 FLSRFIETQM FATFIDNKIM SQWEEKDPLL RVFDSRIEKI RLYNVRAPTL ENSP00000373734/1-1274 FLSRFIETQM FATFIDNKIM SQWEEKDPLL RVFDTRIDKI RLYNVRAPTL BACU006097/1-1234 FLSRFIETQM FATFIDNKIM SQWEEKDPLL RVFDSRIEKI RLYNVRAPTL ENSBTAP00000027075/1-1237 FLSRFIETQM FATFIDNKIM SQWEEKDPLL RVFDSRIEKI RLYNVRAPTL 651 700 bmy_04485T0/1-626 ---------- ---------- ---------- ------MKIG QGKYEPGFFP ENSTTRP00000008025/1-1253 RTSIYQKCST LKEAAQSIEQ RLMKMDHTAI HPHLLDMKIG QGKYEQGFFP ENSP00000373734/1-1274 RTSIYQKCST LKEAAQSIEQ RLMKMDHTAI HPHLLDMKIG QGKYEQGFFP BACU006097/1-1234 RTSIYQKCST LKEAAQSIEQ RLMKMDHTAI HPHLLDMKIG QGKYEQGFFP ENSBTAP00000027075/1-1237 RTSIYQKCST LKEAAQSIEQ RLMKMDHTAI HPHLLDMKIG QGKYEQGFFP 701 750 bmy_04485T0/1-626 KLQSDVLSTG PASN-----K NAPAQWRRKD RQKQHTEHLR LDNDQREKYI ENSTTRP00000008025/1-1253 KLQSDVLATG PANNNRWVSR SATAQ-RRKD RLRQHSEHVG LDNDLREKYM ENSP00000373734/1-1274 KLQSDVLATG PTSNNRWVSR SATAQ-RRKE RLRQHSEHVG LDNDLREKYM BACU006097/1-1234 KLQSDVLATG PANNNRWVSR SATAQ-RRKD RLRQHSEHVG LDNDLREKYM ENSBTAP00000027075/1-1237 KLQSDVLATG PTNNNRWVSR SATAQ-RRKD RLRQHSDHVG LDNDLREKYM 751 800 bmy_04485T0/1-626 QEARNMGSTI RQPKLSNLSP SVIAQTNWKF VEGLLKECRN KTKRMLVEKM ENSTTRP00000008025/1-1253 QEARSLGKNL RQPKLSDLSP AVIAQTNWKF VEGLLKECRM KTKRMLVEKM ENSP00000373734/1-1274 QEARSLGKNL RQPKLSDLSP AVIAQTNCKF VEGLLKECRM KTKRMLVEKM BACU006097/1-1234 QEARSLGKNL RQPKLSDLSP AVIAQTNWKF VEGLLKECRM KTKRMLVEKM ENSBTAP00000027075/1-1237 QEARSLGKNL RQPKLSDLSP AVIAQTNWKF VEGLLKECRM KTKRMLVEKM 801 850 bmy_04485T0/1-626 GREAVELGHG EVNITGVEEN TLIASLCDLL ERIWSHGLQV KQGKSALWSH ENSTTRP00000008025/1-1253 GHEAVELGHG EANITGLEEN TLIASLCDLL ERIWSHGLQV KQGKSALWSH ENSP00000373734/1-1274 GHEAVELGHG EANITGLEEN TLIASLCDLL ERIWSHGLQV KQGKSALWSH BACU006097/1-1234 GHEAVELGHG EANITGLEEN TLIASLCDLL ERIWSHGLQV KQGKSALWSH ENSBTAP00000027075/1-1237 GHEAVELGHG EANITGLEEN TLIASLCDLL ERIWSHGLQV KQGKSALWSH 851 900 bmy_04485T0/1-626 LLHYQENRQR KLTSGSLSTS GIFLDSERRK SDASSVMPPL RISLIQDMRH ENSTTRP00000008025/1-1253 LIQFQDREEK Q---EHLAES PXXXXXXXXX XXXXXXXXXX XXXXXXXXXH ENSP00000373734/1-1274 LIQFQDREEK Q---EHLAES PVALGPERRK SDSGVMLPTL RVSLIQDMRH BACU006097/1-1234 LIQFQDREEK Q---EHLAES PVALGPERRK SDSGVMLPTL RVSLIQDMRH ENSBTAP00000027075/1-1237 LIQFQDREEK Q---EHLAES PVALGPERRK SDSGVMLPTL RVSLIQDMRH 901 950 bmy_04485T0/1-626 IQNIGEIKTD VGKARAWVRL SMEKKLLSRH LKQLLSDHEL TKKLYKRYAF ENSTTRP00000008025/1-1253 IQNMSEIKTD VGRARAWIRL SLEKKLLSQH LKQLLSNQLL TKKLYKRYAF ENSP00000373734/1-1274 IQNMSEIKTD VGRARAWIRL SLEKKLLSQH LKQLLSNQPL TKKLYKRYAF BACU006097/1-1234 IQNMSEIKTD VGRARAWIRL SLEKKLLSQH LKQLLSNQLL TKKLYKRYAF ENSBTAP00000027075/1-1237 IQNMSEIKTD VGRARAWIRL SLEKKVLSQH LKQLLSNQLL TKKLYKRYAF 951 1000 bmy_04485T0/1-626 LRCDDEKEQF LYHLLSFNAV DYFCFTNVFT TILIPYHILI VPSKKLGGSM ENSTTRP00000008025/1-1253 LRCEEEREQF LYHLLSLNAV DYFCFTSVFT TIMIPYRSVI IPIKKLSNAI ENSP00000373734/1-1274 LRCEEEREQF LYHLLSLNAV DYFCFTSVFT TIMIPYRSVI IPIKKLSNAI BACU006097/1-1234 LRCEEEREQF LYHLLSLNAV DYFCFTSVFT TIMIPYRSVI IPIKKLSNAI ENSBTAP00000027075/1-1237 LRCEEEREQF LYHLLSLNAV DYFCFTSVFT TIMIPYRSVI IPIKKLSNAI 1001 1050 bmy_04485T0/1-626 FTANPWICIS GELGETQILQ IPRNVLEMTF EYQNLGKLTT VQIGHDNSGL ENSTTRP00000008025/1-1253 ITSNPWICVS GELGDTGVMQ IPKNLLEMTF ECQNLGKLTT VQIGHDNSGL ENSP00000373734/1-1274 ITSNPWICVS GELGDTGVMQ IPKNLLEMTF ECQNLGKLTT VQIGHDNSGL BACU006097/1-1234 ITSNPWICVS GELGDTGVMQ IPKNLLEMTF ECQNLGKLTT VQIGHDNSGL ENSBTAP00000027075/1-1237 ITSNPWICVS GELGDTGVMQ IPKNLLEMTF ECQNLGKLTT VQIGHDNSGL 1051 1100 bmy_04485T0/1-626 YAKWLVEYVM VRNEITGHTY KFPCGRWLGK GMDDGSLERV LVGDLLTSQP ENSTTRP00000008025/1-1253 LAKWLVDCVM VRNEITGHTY RFPCGRWLGK GIDDGSLERI LIGELMTSAA ENSP00000373734/1-1274 LAKWLVDCVM VRNEITGHTY RFPCGRWLGK GIDDGSLERI LIGELMTSAS BACU006097/1-1234 LAKWLVDCVM VRNEITGHTY RFPCGRWLGK GIDDGSLERI LIGELMMTAA ENSBTAP00000027075/1-1237 LAKWLVDCVM VRNEITGHTY RFPCGRWLGK GIDDGSLERI LIGELMTSAA 1101 1150 bmy_04485T0/1-626 EVD-ERPCRT PPLQQSPSVI RRLVTISPNN K-PKLNTGQI QESIGEAVNG ENSTTRP00000008025/1-1253 DEDLVKQCRT PPQQKSPTMA RRLSITSLTG KTTKPNAGQI QEGIGEAVNN ENSP00000373734/1-1274 DEDLVKQCRT PPQQKSPTTA RRLSITSLTG KNNKPNAGQI QEGIGEAVNN BACU006097/1-1234 DEDLVKQCRT PPQQKSPTTA RRLSITSLTG KTTKPNAGQI QEGIGEAVNN ENSBTAP00000027075/1-1237 DEDLVKQCRT PPQQKSPTVA RRLSITSLTG KTTKPNAGQI QEGIGEAVNN 1151 1200 bmy_04485T0/1-626 IVKHFHKPEK ERGSLTLLLC GECGLVSALE QAFQHGFKSP RLF-KNVFIW ENSTTRP00000008025/1-1253 IVKHFHKPEK ERGSLTVLLC GESGLVAALE QVFHHGFKSA RIFHKNVFIW ENSP00000373734/1-1274 IVKHFHKPEK ERGSLTVLLC GENGLVAALE QVFHHGFKSA RIFHKNVFIW BACU006097/1-1234 IVKHFHKPEK ERGSLTVLLC GESGLVAALE QVFHHGFKSA RIFHKNVFIW ENSBTAP00000027075/1-1237 IVKHFHKPEK ERGSLTVLLC GESGLVAALE QVFHHGFKSA RIFHKNVFIW 1201 1250 bmy_04485T0/1-626 DFLEKAQTYY ETLEQ----- NELVPEENWH MRARNFCRFV TAINNNPRNI ENSTTRP00000008025/1-1253 DFIERAVAYF ETTDQILDNE DDVLIQKS-- -SCKTFCHYV NAINTAPRNI ENSP00000373734/1-1274 DFIEKVVAYF ETTDQILDNE DDVLIQKS-- -SCKTFCHYV NAINTAPRNI BACU006097/1-1234 DFIERAVAYF ETTDQILDNE DDVLIQKS-- -SCKTFCHYV NAINTAPRNI ENSBTAP00000027075/1-1237 DFIERAVAYF ETTDQILDNE DDVLIQKS-- -SCKTFCHYV NAINTAPRNI 1251 1300 bmy_04485T0/1-626 GKDGKFQMLV CLGA---RDH LLHHWIALLA DCPITAHMYE DVALIKDHTL ENSTTRP00000008025/1-1253 GKDGKFQILV CLGT---RDR LLPQWIPLLA ECPAITRMYE ESALLRDRMT ENSP00000373734/1-1274 GKDGKFQILV CLGT---RDR LLPQWIPLLA ECPAITRMYE ESALLRDRMT BACU006097/1-1234 GKDGKFQILV CLGT---RDR LLPQWIPLLA ECPAITRMYE ESALLRDRMT ENSBTAP00000027075/1-1237 GKDGKFQILV CLGTRVCRDR LLPQWIPLLA ECPAITRMYE ESALLRDHMT 1301 1350 bmy_04485T0/1-626 VNSLIRVLQT LQEFNITLET SLVKGIDI ENSTTRP00000008025/1-1253 VNSLIRILQT IQDFTIVLEG SLIKGVDV ENSP00000373734/1-1274 VNSLIRILQT IQDFTIVLEG SLIKGVDV BACU006097/1-1234 VNSLIRILQT IQDFTIVLEG SLIKGVDV ENSBTAP00000027075/1-1237 VNSLIRILQT IQDFTIVLEG SLIKGVDV