KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:31:17 2014 Check: 00 .. Name: ENSP00000314414/1-951 Len: 1029 Check: 2946 Weight: 1.00 Name: ENSTTRP00000014843/1-951 Len: 1029 Check: 3271 Weight: 1.00 Name: BACU013959/1-829 Len: 1029 Check: 8934 Weight: 1.00 Name: bmy_02901T0/1-911 Len: 1029 Check: 4482 Weight: 1.00 Name: ENSBTAP00000027078/1-598 Len: 1029 Check: 3080 Weight: 1.00 // 1 50 ENSP00000314414/1-951 MTDSKYFTTN KKGEIFELKA ELNNEKKEKR KEAVKKVIAA MTVGKDVSSL ENSTTRP00000014843/1-951 MTDSKYFTTN KKGEIFELKA ELNNEKKEKR KEAVKKVIAA MTVGKDVSSL BACU013959/1-829 MTDSKYFTTN KKGEIFELKA ELNNEKKEKR KEAVKKVIAA MTVGKDVSSL bmy_02901T0/1-911 MTDSKYFTTN KKGEIFELKA ELNNEKKEKR KEAVKKVIAA MTVGKDVSSL ENSBTAP00000027078/1-598 MTDSKYFTTN KKGEIFELKA ELNNEKKEKR KEAVKKVIAA MTVGKDVSSL 51 100 ENSP00000314414/1-951 FPDVVNCMQT DNLELKKLVY LYLMNYAKSQ PDMAIMAVNS FVKDCEDPNP ENSTTRP00000014843/1-951 FPDVVNCMQT DNLELKKLVY LYLMNYAKSQ PDMAIMAVNS FVKDCEDPNP BACU013959/1-829 FPDVVNCMQT DNLELKKLVY LYLMNYAKSQ PDMAIMAVNS FVKDCEDPNP bmy_02901T0/1-911 FPDVVNCMQT DNLELKKLVY LYLMNYAKSQ PDMAIMAVNS FVKDCEDPNP ENSBTAP00000027078/1-598 FPDVVNCMQT DNLELKKLVY LYLMNYAKSQ PDMAIMAVNS FVKDCEDPNP 101 150 ENSP00000314414/1-951 LIRALAVRTM GCIRVDKITE YLCEPLRKCL KDEDPYVRKT AAVCVAKLHD ENSTTRP00000014843/1-951 LIRALAVRTM GCIRVDKITE YLCEPLRKCL KDEDPYVRKT AAVCVAKLHD BACU013959/1-829 LIRALAVRTM GCIRVDKITE YLCEPLRKCL KDEDPYVRKT AAVCVAKLHD bmy_02901T0/1-911 LIRALAVRTM GCIRVDKITE YLCEPLRKCL KDEDPYVRKT AAVCVAKLHD ENSBTAP00000027078/1-598 LIRALAVRTM GCIRVDKITE YLCEPLRKCL KDEDPYVRKT AAVCVAKLHD 151 200 ENSP00000314414/1-951 INAQMVEDQG FLDSLRDLIA DSNPM----- ---------- ---------V ENSTTRP00000014843/1-951 INAQMVEDQG FLDSLRDLIA DSNPM----- ---------- ---------V BACU013959/1-829 INAQMVEDQG FLDSLRDLIA DSNPMLVRIS ---------- -------GSV bmy_02901T0/1-911 INAQMVEDQG FLDSLRDLIA DSNPMIYEVI QRNSCTVLDK SRSYLLLSQV ENSBTAP00000027078/1-598 INAQMVEDQG FLDSLRDLIA DSNPM----- ---------- ---------V 201 250 ENSP00000314414/1-951 VANAVAALSE ISESHPNSNL LDLNPQNINK LLTALNECTE WGQIFILDCL ENSTTRP00000014843/1-951 VANAVAALSE ISESHPNSNL LDLNPQNINK LLTALNECTE WGQIFILDCL BACU013959/1-829 VANAVAALSE ISESHPNSNL LDLNPQNINK LLTALNECTE WGQIFILDCL bmy_02901T0/1-911 VANAVAALSE ISESHPNSNL LDLNPQNINK LLTALNECTE WGQIFILDCL ENSBTAP00000027078/1-598 VANAVAALSE ISESHPNSNL LDLNPQNINK LLTALNECTE WGQIFILDCL 251 300 ENSP00000314414/1-951 SNYNPKDDRE AQSICERVTP RLSHANSAVV LSAVKVLMKF LELLPKDSDY ENSTTRP00000014843/1-951 SNYNPKDDRE AQSICERVTP RLSHANSAVV LSAVKVLMKF LELLPKDSDY BACU013959/1-829 SNYNPKDDRE AQSICERVTP RLSHANSAVV LSAVKVLMKF LELLPKDSDY bmy_02901T0/1-911 SNYNPKDDRE AQSICERVTP RLSHANSAVV LSAVKVLMKF LELLPKDSDY ENSBTAP00000027078/1-598 SNYNPKDDRE AQSICERVTP RLSHANSAVV LSAVKVLMKF LELLPKESDY 301 350 ENSP00000314414/1-951 YNMLLKKLAP PLVTLLSGEP EVQYVALRNI NLIVQKRPEI LKQEIKVFFV ENSTTRP00000014843/1-951 YNMLLKKLAP PLVTLLSGEP EVQYVALRNI NLIVQKRPEI LKQEIKVFFV BACU013959/1-829 YNMLLKKLAP PLVTLLSGEP EVQYVALRNI NLIVQKRPEI LKQEIKVFFV bmy_02901T0/1-911 YNMLLKKLAP PLVTLLSGEP EVQYVALRNI NLIVQKRPEI LKQEIKVFFV ENSBTAP00000027078/1-598 YNMLLKKLAP PLVTLLSGEP EVQYVALRNI NLIVQKRPEI LKQEIKVFFV 351 400 ENSP00000314414/1-951 KYNDPIYVKL EKLDIMIRLA SQANIAQVLA ELKEYATEVD VDFVRKAVRA ENSTTRP00000014843/1-951 KYNDPIYVKL EKLDIMIRLA SQANIAQVLA ELKEYATEVD VDFVRKAVRA BACU013959/1-829 KYNDPIYVKL EKLDIMIRLA SQANIAQVLA ELKEYATEVD VDFVRKAVRA bmy_02901T0/1-911 KYNDPIYVKL EKLDIMIRLA SQANIAQVLA ELKEYATEVD VDFVRKAVRA ENSBTAP00000027078/1-598 KYNDPIYVKL EKLDIMIRLA SQANIAQVLA ELKEYATEVD VDFVRKAVRA 401 450 ENSP00000314414/1-951 IGRCAIKVE- -QSAERCVST LLDLIQTKVN YVVQEAIVVI RDIFRKYPNK ENSTTRP00000014843/1-951 IGRCAIKVE- -QSAERCVST LLDLIQTKVN YVVQEAIVVI RDIFRKYPNK BACU013959/1-829 IGRCAIK--- -QSAERCVST LLDLIQTKVN YVVQEAIVVI RDIFRKYPNK bmy_02901T0/1-911 IGRCAIKVEA SQSAERCVST LLDLIQTKVN YVVQEAIVVI RDIFRKYPNK ENSBTAP00000027078/1-598 IGRCAIKVE- -QSAERCVST LLDLIQTKVN YVVQEAIVVI RDIFRKYPNK 451 500 ENSP00000314414/1-951 YESIIATLCE NLDSLDEPDA RAAMIWIVGE YAERIDNADE LLESFLEGFH ENSTTRP00000014843/1-951 YESIIATLCE NLDSLDEPDA RAAMIWIVGE YAERIDNADE LLESFLEGFH BACU013959/1-829 YESIIATLCE NLDSLDEPDA RAAMIWIVGE YAERIDNADE LLESFLEGFH bmy_02901T0/1-911 YESIIATLCE NLDSLDEPDA RAAMIWIVGE YAERIDNADE LLESFLEGFH ENSBTAP00000027078/1-598 YESIIATLCE NLDSLDEPDA RAAMIWIVGE YAERIDNADE LLESFLEGFH 501 550 ENSP00000314414/1-951 DESTQVQLTL LTAIVKLFLK KPSETQELVQ QVLSLATQDS DNPDLRDRGY ENSTTRP00000014843/1-951 DESTQVQLTL LTAIVKLFLK KPSETQELVQ QVLSLATQDS DNPDLRDRGY BACU013959/1-829 DESTQVQLTL LTAIVKLFLK KPSETQELVQ QVLSLATQDS DNPDLRDRGY bmy_02901T0/1-911 DESTQVQLTL LTAIVKLFLK KPSETQELVQ QVLSLATQDS DNPDLRDRGY ENSBTAP00000027078/1-598 DESTQVQLTL LTAIVKLFLK KPSETQELVQ QVLSLATQDS DNPDLRDRGY 551 600 ENSP00000314414/1-951 IYWRLLSTDP VTAKEVVLSE KPLISEETDL IEPTLLDELI CHIGSLASVY ENSTTRP00000014843/1-951 IYWRLLSTDP VTAKEVVLSE KPLISEETDL IEPTLLDELI CHIGSLASVY BACU013959/1-829 IYWRLLSTDP VTAKEVVLSE KPLISEETDL IEPTLLDELI CHIGSLASVY bmy_02901T0/1-911 IYWRLLSTDP VTAKEVVLSE KPLISEETDL IEPTLLDELI CHIGSLASVY ENSBTAP00000027078/1-598 IYWRLLSTDP VTAKEVVLSE KPLISEETDL IEPTLLDELI CHIGSLASVY 601 650 ENSP00000314414/1-951 HKPPNAFVEG SHGIHRKHLP IHHGSTDAGD SPVGTTTATN LEQPQVIPSQ ENSTTRP00000014843/1-951 HKPPNAFVEG SHGIHRKHLP VHHGSTDAGD SPVGTTTATN LEQPQVIPSQ BACU013959/1-829 HKPPNAFVEG SHGIHRKHLP IHHGSTDAGD SPVGTTTATN LEQPQVIPSQ bmy_02901T0/1-911 HKPPNAFVEG SHGIHRKHLP IHHGSTDAGD SPVGTTTATN LEQPQVIPSQ ENSBTAP00000027078/1-598 HKPPNAFVEG SHGIHRKHLP IHHG------ ---------- ---------- 651 700 ENSP00000314414/1-951 GDLLGDLLNL DLGPPVNVPQ VSSMQMGAVD LLGGGLDSL- ---------- ENSTTRP00000014843/1-951 GDLLGDLLNL DLGPPVNVPQ VSSMQMGAVD LLGGGLDSL- ---------- BACU013959/1-829 GDLLGDLLNL DLGPPVNVPQ VSSMQMGAVD LLGGGLDSL- ---------- bmy_02901T0/1-911 GDLLGDLLNL DLGPPVNVPQ VSSMQMGAVD LLGGGLDSLV SIFLLSFVCK ENSBTAP00000027078/1-598 ---------- ---------- ---------- ---------- ---------- 701 750 ENSP00000314414/1-951 ---------- ---------- -------LGS DLGGGI---- ---------- ENSTTRP00000014843/1-951 ---------- ---------- -------LGS DLGGGI---- ---------- BACU013959/1-829 ---------- ---------- -------LGS DLGGGI---- ---------- bmy_02901T0/1-911 AWILFIYVFP SSPGIFIVPI VPYVQQILAV TLAGALEEVR QKSLSVSWTQ ENSBTAP00000027078/1-598 ---------- ---------- ---------- ---------- ---------- 751 800 ENSP00000314414/1-951 GGSPAVGQSF IPSSVPATFA PSPTPAVVSS GLNDLFELST GIGMAPGGYV ENSTTRP00000014843/1-951 GGSPAVGQSF IPSSVPATFA PSPTPAVVSS GLNDLFELST GIGMAPGGYV BACU013959/1-829 GGSPAVGQSF IPSSVPATFA PSPTPAVVSS GLNDLFELST GIGMAPGGYV bmy_02901T0/1-911 SETLLVGQSF IPSSVPATFA PSPTPAVVSS GLNDLFELST GIGMAPGGYV ENSBTAP00000027078/1-598 ---------- ---------- ---------- ---------- ---------- 801 850 ENSP00000314414/1-951 APKAVWLPAV KAKGLEISGT FTHRQGHIYM EMNFTNKALQ HMTDFAIQFN ENSTTRP00000014843/1-951 APKAVWLPAV KAKGLEISGT FTHRQGHIYM EMNFTNKALQ HMTDFAIQFN BACU013959/1-829 APKAVWLPAV KAKGLEISGT FTHRQGHIYM EMTFTNKALQ HMTDFAIQFN bmy_02901T0/1-911 APKAVWLPAV KAKGLEISGT FTHRQGHIYM EMNFTNKALQ HMTDFAIQFN ENSBTAP00000027078/1-598 ---------- ---------- ---------- ---------- ---------- 851 900 ENSP00000314414/1-951 KNSFGVIPST PLAIHTPLMP NQSIDVSLPL NTLGPVMKME PLNNLQVAVK ENSTTRP00000014843/1-951 KNSFGVIPST PLAIHTPLMP NQSIDVSLPL NTLGPVMKME PLNNLQVAVK BACU013959/1-829 KNSFGVIPST PLAIHTPLMP NQSIDVSLPL NTLGPVMKME PLNN------ bmy_02901T0/1-911 KNSFGVIPST PLAIHTPLMP NQSIDVSLPL NTLGPVMKME PLNN------ ENSBTAP00000027078/1-598 ---------- ---------- ---------- ---------- ---------- 901 950 ENSP00000314414/1-951 NNIDVFYFSC LIPLNVLFVE DGKMERQVFL ATWKDIPNEN ELQFQIKECH ENSTTRP00000014843/1-951 NNIDVFYFSC LIPLNVLFVE DGKMERQVFL ATWKDIPNEN ELQFQIKECH BACU013959/1-829 ---------- ---------- ---------- ---------- -LQ------- bmy_02901T0/1-911 ---------- ---------- ---------- ---------- -LQYEQKESD ENSBTAP00000027078/1-598 ---------- ---------- ---------- ---------- ---------- 951 1000 ENSP00000314414/1-951 LNADTVSSKL QNNNVYTIAK RNVEGQDMLY QSLKLTNGIW ILAELRIQPG ENSTTRP00000014843/1-951 LNADTVSSKL QNNNVYTIAK RNVEGQDMLY QSLKLTNGIW ILAELRIQPG BACU013959/1-829 ----SLKPNI ---------- ---------- ---------- ---------- bmy_02901T0/1-911 LNFNKLRP-- ---------- ---------- ---------- ---------- ENSBTAP00000027078/1-598 ---------- ---------- ---------- ---------- ---------- 1001 1050 ENSP00000314414/1-951 NPNYTLSLKC RAPEVSQYIY QVYDSILKN ENSTTRP00000014843/1-951 NPNYTLSLKC RAPEVSQYIY QVYDSILKN BACU013959/1-829 ---------- ---------- --------- bmy_02901T0/1-911 ---------- ---------- --------- ENSBTAP00000027078/1-598 ---------- ---------- ---------