KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:31:17 2014 Check: 00 .. Name: ENSTTRP00000011129/1-672 Len: 674 Check: 5194 Weight: 1.00 Name: ENSP00000363512/1-674 Len: 674 Check: 3525 Weight: 1.00 Name: ENSBTAP00000027080/1-674 Len: 674 Check: 2615 Weight: 1.00 Name: bmy_04289T0/1-489 Len: 674 Check: 4349 Weight: 1.00 Name: BACU006355/1-674 Len: 674 Check: 4756 Weight: 1.00 // 1 50 ENSTTRP00000011129/1-672 MPSYTVTVAT GSQWFAGTDD YIYLSLVGSA GCSEKHLLDK PFYNDFERGA ENSP00000363512/1-674 MPSYTVTVAT GSQWFAGTDD YIYLSLVGSA GCSEKHLLDK PFYNDFERGA ENSBTAP00000027080/1-674 MPSYTVTVAT GSQWFAGTDD YIYLSLVGSA GCSEKHLLDK PFYNDFERGA bmy_04289T0/1-489 ---------- ---------- ---------- ---------- ---------- BACU006355/1-674 MPSYTVTVAT GSQWFAGTDD YIYLSLVGSA GCSEKHLLDK PFYNDFERGA 51 100 ENSTTRP00000011129/1-672 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000363512/1-674 VDSYDVTVDE ELGEIQLVRI EKRKYWLNDD WYLKYITLKT PHGDYIEFPC ENSBTAP00000027080/1-674 VDSYDVTVDE ELGDIQLIKI EKRKYWFHDD WYLKYITVKT PCGDYIEFPC bmy_04289T0/1-489 ---------- ---------- ---------- ---------- ---------- BACU006355/1-674 VDSYNVIVDD ELGDIQLIRI EKRKYWFHDD WYLKYITLKT PCGDYIEFPC 101 150 ENSTTRP00000011129/1-672 XXXXXXXXXX XXXXXXXKLA CDDQIHILKQ HRRKELETRQ KEYRWMEWNP ENSP00000363512/1-674 YRWITGDVEV VLRDGRAKLA RDDQIHILKQ HRRKELETRQ KQYRWMEWNP ENSBTAP00000027080/1-674 YRWISGEGEI VLRDGQAKLA CDDQIHVLKQ HRRKELETRQ KQYRWMEWNP bmy_04289T0/1-489 ---------- ---------- ---------- ---------- ---------- BACU006355/1-674 YRWISGESEI VLRGGRAKLA CDDQIHILKQ HRRKELETRQ KQYRWMEWTP 151 200 ENSTTRP00000011129/1-672 GFPLSIDAKC HKDLPRDIQF DSEKGVDFVL NYSKAMENLF INRFMHMFQS ENSP00000363512/1-674 GFPLSIDAKC HKDLPRDIQF DSEKGVDFVL NYSKAMENLF INRFMHMFQS ENSBTAP00000027080/1-674 GFPLSIDAKC HKDLPRDIQF DSEKGVDFVL NYSKAMENLF INRFMHMFQS bmy_04289T0/1-489 ---------- ---------- ---------- -----MENLF INRFMHMFQS BACU006355/1-674 GFPLSIDAKC HKDLPRDIQF DSEKGVDFVL NYSKAMENLF INRFMHMFQS 201 250 ENSTTRP00000011129/1-672 SWSDFADFEK IFLRISNTIS EQVMNHWQED LMFGYQ-LNG CNPVLIQRCV ENSP00000363512/1-674 SWNDFADFEK IFVKISNTIS ERVMNHWQED LMFGYQFLNG CNPVLIRRCT ENSBTAP00000027080/1-674 SWSDFADFEK IFVRISNTIS ERVMNHWQED RMFGYQFLNG CNPVMIQRCL bmy_04289T0/1-489 SWSNFADFEK IFVRISNTIS EQVMNHWQED LMFGYQFLNG CNPVLIQRCT BACU006355/1-674 SWSDFADFEK IFVRISNTIS EQVMNHWQED LMFGYQFLNG CNPVLIQRCT 251 300 ENSTTRP00000011129/1-672 KLPENLPVTT EMVECSLERQ LTLEQEVELG NIFVVDFKLL DGIDVNKTDP ENSP00000363512/1-674 ELPEKLPVTT EMVECSLERQ LSLEQEVQQG NIFIVDFELL DGIDANKTDP ENSBTAP00000027080/1-674 KLPDNLPVTT EMVECSLERQ LTLEQEIEQG NIFIVDFKLL DGIDANKTDP bmy_04289T0/1-489 KLPANLPVTT EMVECSLERQ LTLEQEVELG NIFIVDFKLL DGIDVNKTDP BACU006355/1-674 KLPENLPVTT EMVECSLERQ LTLEQEVELG NIFVVDFKLL DGIDVNKTDP 301 350 ENSTTRP00000011129/1-672 CTLQFLAAPI CLLYKNLANK IVPIAIQLNQ VPGDENPIFL PSDAKSDWLL ENSP00000363512/1-674 CTLQFLAAPI CLLYKNLANK IVPIAIQLNQ IPGDENPIFL PSDAKYDWLL ENSBTAP00000027080/1-674 CTLQFLAAPI CLLYKNLANK IVPIAIQLNQ VPGEENPIFL PSDAKYDWLL bmy_04289T0/1-489 CTLQFLAAPI CLLYKNLANK IVPIAIQLNQ VPGDENPIFL PSDAKYDWLL BACU006355/1-674 CTLQFLAAPI CLLYKNLANK IVPIAIQLNQ VPGDENPIFL PSDAKYDWLL 351 400 ENSTTRP00000011129/1-672 AKIWVRSCDF HIHQTITHLL RTHLVSEVFG IALYRQLPAV HPIFKXXXXX ENSP00000363512/1-674 AKIWVRSSDF HVHQTITHLL RTHLVSEVFG IAMYRQLPAV HPIFKLLVAH ENSBTAP00000027080/1-674 AKIWVRSSDF HVHQTITHLL RTHLVSEVFG IAMYRQLPAV HPIFKLLVAH bmy_04289T0/1-489 AKIWVRSSDF HIHQTITHLL RTHLVSEVFG IAMYRQLPAV HPIFKLLVAH BACU006355/1-674 AKIWVRSSDF HIHQTITHLL RTHLVSEVFG IAMYRQLPAV HPIFKLLVAH 401 450 ENSTTRP00000011129/1-672 XXXXXXXXXX XXXXXXXXXX XXXXANATGG GGHVQMVQKS MQDLTYSSLC ENSP00000363512/1-674 VRFTIAINTK AREQLICECG LFDKANATGG GGHVQMVQRA MKDLTYASLC ENSBTAP00000027080/1-674 VRFTIAINTK AREQLICEYG LFDKANATGG GGHVQMVQRA MQDLTYTSLC bmy_04289T0/1-489 VRFTIAINTK AREQLICEYG LFDKANATGG GGHVQLVQKS MEDLTYSSLC BACU006355/1-674 MRFTIAINTK AREQLICEYG LFDKANATGG GGHVQLVQKS MQDLTYSSLC 451 500 ENSTTRP00000011129/1-672 FPEAIKARGM DNTEDIPYYF YRDDGLLVWE AIREFTAEVV DIYYESDQVV ENSP00000363512/1-674 FPEAIKARGM ESKEDIPYYF YRDDGLLVWE AIRTFTAEVV DIYYEGDQVV ENSBTAP00000027080/1-674 FPEAIKARGM DNAEDIPYYF YRDDGLLVWE AIKTFVAEVV GIYYEGDQVV bmy_04289T0/1-489 FPEAIKARGM DNTEDIPYYF YRDDGLLVWE AIRAFTAEVV DIYYGSDQVV BACU006355/1-674 FPEAIKARGM DNTEDIPYYF YRDDGLLVWE AIRAFTAEVV DIYYGSDQVV 501 550 ENSTTRP00000011129/1-672 EGDQELQDFV KDVYMYGMRG KKASGFPESI KTKEKLSEYL TVVIFTASAQ ENSP00000363512/1-674 EEDPELQDFV NDVYVYGMRG RKSSGFPKSV KSREQLSEYL TVVIFTASAQ ENSBTAP00000027080/1-674 EEDQELQDFV KDVYMYGMRG RKASGFPKSI KAKEKLCEYL TVVIFTASAQ bmy_04289T0/1-489 EEDQELQDFV KDVYVYGMRG KKASGFPKSI KTKEKLSEYL TVVIFTASAQ BACU006355/1-674 EEDQELQDFV RDVYVYGMRD KKASGFPKSI KTKEKLSEYL TVVIFTASAQ 551 600 ENSTTRP00000011129/1-672 HAA-DFGQYD WYSWIPNAPP TMRAPPPKVK GVVTIEQIVD MLPDRGRSCW ENSP00000363512/1-674 HAAVNFGQYD WCSWIPNAPP TMRAPPPTAK GVVTIEQIVD TLPDRGRSCW ENSBTAP00000027080/1-674 HAAVNFGQYD WCSWIPNAPP TMRAPPPTAK GVVTIEQIVE TLPDRGRSCW bmy_04289T0/1-489 HAAVNFGQYD WCSWIPNAPP TMRAPPPTVK GVVTIEQIVD MLPDRGRSCW BACU006355/1-674 HAAVNFGQYD WCSWIPNAPP TMRAPPPTVK GMVTIEQIVD MLPDRGRSCW 601 650 ENSTTRP00000011129/1-672 HLGAVWALSQ FQDNELFLGM YPEEHFIETP VKEAMARFRK KLDTIVSVIA ENSP00000363512/1-674 HLGAVWALSQ FQENELFLGM YPEEHFIEKP VKEAMARFRK NLEAIVSVIA ENSBTAP00000027080/1-674 HLGAVWALSQ FQDNELFLGM YPEEHFVEKP VKEAMARFRK NLDSIVSVIA bmy_04289T0/1-489 HLGAVWALSQ FQDNELFLGM YPEEHFIETP VKEAMARFRK NLDAIVSVIA BACU006355/1-674 HLGAVWALSQ FQDNELFLGM YPEEHFIETP VKEAMARFRK NLDAIVSVIA 651 700 ENSTTRP00000011129/1-672 ERNKKKKLPY YYLSPDRIPN SVAI ENSP00000363512/1-674 ERNKKKQLPY YYLSPDRIPN SVAI ENSBTAP00000027080/1-674 ERNKNKKLPY YYLSPDRIPN SVAI bmy_04289T0/1-489 ERNKNKKLPY YYLSPDRIPN SVAI BACU006355/1-674 ERNKNKKLPY YYLSPDRIPN SVAI