KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:31:20 2014 Check: 00 .. Name: ENSTTRP00000003035/1-805 Len: 1654 Check: 9529 Weight: 1.00 Name: ENSBTAP00000027095/1-692 Len: 1654 Check: 3652 Weight: 1.00 Name: ENSP00000263847/1-807 Len: 1654 Check: 1114 Weight: 1.00 Name: bmy_16753T0/1-681 Len: 1654 Check: 718 Weight: 1.00 Name: BACU017278/1-1647 Len: 1654 Check: 3139 Weight: 1.00 // 1 50 ENSTTRP00000003035/1-805 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000027095/1-692 ---------- ---------- ---------- ---------- ---------- ENSP00000263847/1-807 ---------- ---------- ---------- ---------- ---------- bmy_16753T0/1-681 ---------- ---------- ---------- ---------- ---------- BACU017278/1-1647 MYFFLANLAV LETFYSSTVA PLALVSFLTL GRILISFTGC GTQMFFLVFL 51 100 ENSTTRP00000003035/1-805 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000027095/1-692 ---------- ---------- ---------- ---------- ---------- ENSP00000263847/1-807 ---------- ---------- ---------- ---------- ---------- bmy_16753T0/1-681 ---------- ---------- ---------- ---------- ---------- BACU017278/1-1647 GSADCILLGI MAYDRFVAIR DPFCYSFLRR WQLCTQLAMG ALVLGFIPAL 101 150 ENSTTRP00000003035/1-805 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000027095/1-692 ---------- ---------- ---------- ---------- ---------- ENSP00000263847/1-807 ---------- ---------- ---------- ---------- ---------- bmy_16753T0/1-681 ---------- ---------- ---------- ---------- ---------- BACU017278/1-1647 QLTILIFLLP FCGHSRIPHF YCDVFPILRL ACGDTRMQEA MIFIVSVIIL 151 200 ENSTTRP00000003035/1-805 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000027095/1-692 ---------- ---------- ---------- ---------- ---------- ENSP00000263847/1-807 ---------- ---------- ---------- ---------- ---------- bmy_16753T0/1-681 ---------- ---------- ---------- ---------- ---------- BACU017278/1-1647 TIPFSLSSIS YLFIVAAILQ IYSAEGRPKT FPTCSSHLTV VLLQYSCCSL 201 250 ENSTTRP00000003035/1-805 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000027095/1-692 ---------- ---------- ---------- ---------- ---------- ENSP00000263847/1-807 ---------- ---------- ---------- ---------- ---------- bmy_16753T0/1-681 ---------- ---------- ---------- ---------- ---------- BACU017278/1-1647 IYLRPSSSYN PETGRVVSVV YIFVTPVLNP LIYSIRNKEL KDALNKSLED 251 300 ENSTTRP00000003035/1-805 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000027095/1-692 ---------- ---------- ---------- ---------- ---------- ENSP00000263847/1-807 ---------- ---------- ---------- ---------- ---------- bmy_16753T0/1-681 ---------- ---------- ---------- ---------- ---------- BACU017278/1-1647 CPLDEDEDAF QGLGEEDEEI DQFNDDTFGS GAVDDDWQEA HERLAELEEK 301 350 ENSTTRP00000003035/1-805 ---------- ---------- ---------- ---------- -----MAATE ENSBTAP00000027095/1-692 ---------- ---------- ---------- ---------- ---------- ENSP00000263847/1-807 ---------- ---------- ---------- ---------- -----MAATE bmy_16753T0/1-681 ---------- ---------- ---------- ---------- ---------- BACU017278/1-1647 LPVVVNEQTG NGERDEMDLL GDHEENLAER LSKMVIENEL EDPAIMRAVQ 351 400 ENSTTRP00000003035/1-805 LRGVVGPGPA AIAAPGGGGG GAGPPMVG-- ---------- ---------- ENSBTAP00000027095/1-692 ---------- ---------- ---------- ---------- ---------- ENSP00000263847/1-807 LRGVVGPGPA AIAALGGGG- -AGPPVVG-- ---------- ---------- bmy_16753T0/1-681 ---------- ---------- ---------- ---------- ---------- BACU017278/1-1647 TRPVLQPRPG SLNSSIWDGS EVLRRIRGPL LAQEMPTVSV LEYALPQRPP 401 450 ENSTTRP00000003035/1-805 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000027095/1-692 ---------- ---------- ---------- ---------- ---------- ENSP00000263847/1-807 ---------- ---------- ---------- ---------- ---------- bmy_16753T0/1-681 ---------- ---------- ---------- ---------- ---------- BACU017278/1-1647 QGPEDDRDVS ERALPRRSTS PIIGSPPVRA VPIGTPPKQM AVPSFNQQIL 451 500 ENSTTRP00000003035/1-805 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000027095/1-692 ---------- ---------- ---------- ---------- ---------- ENSP00000263847/1-807 ---------- ---------- ---------- ---------- ---------- bmy_16753T0/1-681 ---------- ---------- ---------- ---------- ---------- BACU017278/1-1647 CPKPVHVRPP MPPRYPAPYG DRMSPNQLCS VPNSSLLGHP FPPSVPPVLS 501 550 ENSTTRP00000003035/1-805 --------GG GAGGRGDSGP S--------- --------SG IAPGTVAAVA ENSBTAP00000027095/1-692 ---------- ---------- ---------- ---------- ---------- ENSP00000263847/1-807 --------GG GGR--GDAGP G--------- --------SG AASGTVVAAA bmy_16753T0/1-681 ---------- ---------- ---------- ---------- ---------- BACU017278/1-1647 PLQRAQLLGG AQLQPGRMSP SQFARVPGFV GSPLAAMNPK LLQGRVGQML 551 600 ENSTTRP00000003035/1-805 AGGPGPGAGG VAAAGSAPAP P---AGGSGA GGSGSAREGW LFK------- ENSBTAP00000027095/1-692 ---------- ---------- ---------- ---------- ---------- ENSP00000263847/1-807 AGGPGPGAGG VAAAGPAPAP PTGGSGGSGA GGSGSAREGW LFK------- bmy_16753T0/1-681 ---------- ---------- ---------- ---------- -MK------- BACU017278/1-1647 PPAPGFRAFF SAPAPATPPP PQQHPPGPGP HLQNLRSQAP MFRPDTTHLH 601 650 ENSTTRP00000003035/1-805 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000027095/1-692 ---------- ---------- ---------- ---------- ---------- ENSP00000263847/1-807 ---------- ---------- ---------- ---------- ---------- bmy_16753T0/1-681 ---------- ---------- ---------- ---------- ---------- BACU017278/1-1647 PQHRRLLHQR QQQNRNQHRN LNGAGDRGSH RSSHQDHLRK DPYANLMLQR 651 700 ENSTTRP00000003035/1-805 ---WTNYIK- ---------- ---------- ---------- ---------- ENSBTAP00000027095/1-692 ---------- ---------- ---------- ---------- ---------- ENSP00000263847/1-807 ---WTNYIK- ---------- ---------- ---------- ---------- bmy_16753T0/1-681 ---W--NVR- ---------- ---------- ---------- ---------- BACU017278/1-1647 EKDWVSKIQM MQLQSTDPYL DDFYYQNYFE KLEKLSAAEE VQGDAPKKER 701 750 ENSTTRP00000003035/1-805 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000027095/1-692 ---------- ---------- ---------- ---------- ---------- ENSP00000263847/1-807 ---------- ---------- ---------- ---------- ---------- bmy_16753T0/1-681 ---------- ---------- ---------- ---------- ---------- BACU017278/1-1647 TKLITPQVAK LEHTYKPVQF EGSLGKLTVS SVNNPRKMID AVVTSRSEDD 751 800 ENSTTRP00000003035/1-805 ---------- ---------- ---------G YQRRW----- ---------- ENSBTAP00000027095/1-692 ---------- ---------- ---------- ---------- ---------- ENSP00000263847/1-807 ---------- ---------- ---------G YQRRW----- ---------- bmy_16753T0/1-681 ---------- ---------- ---------K DKPRI----- ---------- BACU017278/1-1647 ETKEKQVRDK RRKTLVIIEK TYSLLLDVED YERRYLLSLE EERPALMDER 801 850 ENSTTRP00000003035/1-805 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000027095/1-692 ---------- ---------- ---------- ---------- ---------- ENSP00000263847/1-807 ---------- ---------- ---------- ---------- ---------- bmy_16753T0/1-681 ---------- ---------- ---------- ---------- ---------- BACU017278/1-1647 KHKICSMYDN LRGKLPGQER PSDDHFVQIM CIRKGKRMVA RILPFLSTEQ 851 900 ENSTTRP00000003035/1-805 ---------- ---------- ---FVLSNGL LSYYR----- ---------- ENSBTAP00000027095/1-692 ---------- ---------- ---------- ----R----- ---------- ENSP00000263847/1-807 ---------- ---------- ---FVLSNGL LSYYR----- ---------- bmy_16753T0/1-681 ---------- ---------- --SFLLSLSL ARYCR----- ---------- BACU017278/1-1647 AADILMTTAR NLPFLIKKDA QDEFGLSLLL VVLSRGEDLQ SSDPTSESTQ 901 950 ENSTTRP00000003035/1-805 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000027095/1-692 ---------- ---------- ---------- ---------- ---------- ENSP00000263847/1-807 ---------- ---------- ---------- ---------- ---------- bmy_16753T0/1-681 ---------- ---------- ---------- ---------- ---------- BACU017278/1-1647 SNQWTEVMFM ATRELLRIPQ AALAKPISIP TNLVSLFSRY VDRQKLNLLE 951 1000 ENSTTRP00000003035/1-805 ----SKAEMR HTCRGTINLA TANITVEDSC NFIISNGGAQ TYHLKASSEV ENSBTAP00000027095/1-692 ----SKAEMR HTCRGTINLA TANITVEDSC NFIISNGGAQ TYHLKASSEV ENSP00000263847/1-807 ----SKAEMR HTCRGTINLA TANITVEDSC NFIISNGGAQ TYHLKASSEV bmy_16753T0/1-681 ----SKAEMR HTCRGTINLA TANITVEDSC NFIISNGGAQ TYHLKASSEV BACU017278/1-1647 TKLQSKAEMR HTCRGTINLA TANITVEDSC NFIISNGGAQ TYHLKASSEV 1001 1050 ENSTTRP00000003035/1-805 ERQRWVTALE LAKAKAVKML AESDESGD-E SVSQTDKTEL Q-TLRTLSSK ENSBTAP00000027095/1-692 ERQRWVTALE LAKAKAVKML AESDESGDEE SVSQTDKTEL QNTLRTLSSK ENSP00000263847/1-807 ERQRWVTALE LAKAKAVKML AESDESGDEE SVSQTDKTEL QNTLRTLSSK bmy_16753T0/1-681 ERQRWVTALE LAKAKAVKML AESDESGDEE SVSQTDKTEL QNTLRTLSSK BACU017278/1-1647 ERQRWVTALE LAKAKAVKML AESDESGDEE SVSQTDKTEL QNTLRTLSSK 1051 1100 ENSTTRP00000003035/1-805 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSBTAP00000027095/1-692 VEDLSTCNDL IAKHGTALQR SLSELEALRL PAESSEKIKQ VNERATLFRI ENSP00000263847/1-807 VEDLSTCNDL IAKHGTALQR SLSELESLKL PAESNEKIKQ VNERATLFRI bmy_16753T0/1-681 VEDLSTCNDL IAKHGTALQR SLSELESLRL PAESNEKIKQ VNERATLFRI BACU017278/1-1647 VEDLSTCNDL IAKHGTALQR SLSELESLRL PAESNEKIKQ VNERATLFRI 1101 1150 ENSTTRP00000003035/1-805 XXXXXXX--- ----ACRDFL VLAQTHSKKW QKSLQYERDQ RIRLEETLEQ ENSBTAP00000027095/1-692 TSNAMIN--- ----ACRDFL VLAQTHSKKW QKSLQYERDQ RIRLEETLEQ ENSP00000263847/1-807 TSNAMIN--- ----ACRDFL MLAQTHSKKW QKSLQYERDQ RIRLEETLEQ bmy_16753T0/1-681 TSNAMIN--- ----ACRDFL VLAQTHSKKW QKSLQYERDQ RIRLEETLEQ BACU017278/1-1647 TSNAMINISS SIPQACRDFL VLAQTHSKKW QKSLQYERDQ RIRLEETLEQ 1151 1200 ENSTTRP00000003035/1-805 LAKQHNHLER AFRGATVLPA NAPGGAASGK GQCCSGKGDV SDEDDENEFF ENSBTAP00000027095/1-692 LAKQHNHLER AFRGATVLPA GAPG-AGPGK DQSCSGKGDL SDEDDENEFF ENSP00000263847/1-807 LAKQHNHLER AFRGATVLPA NTPGNVGSGK DQCCSGKGDM SDEDDENEFF bmy_16753T0/1-681 LAKQHNHLER AFRGATVLPA NAPGGAGSGK GQCCSGKGDV SDEDDENEFF BACU017278/1-1647 LAKQHNHLER AFRGATVLPA NAPGSAGSGK GQCCSGKGDV SDEDDENEFF 1201 1250 ENSTTRP00000003035/1-805 DAPEIIT--- ---MPENLGH KRTGSNISGA SSDISLDEQY KHQLEETKKE ENSBTAP00000027095/1-692 DAPEIITVLI FILIPVSRPC RRTGSNISGA SSDISLDEQY KHQLEETKKE ENSP00000263847/1-807 DAPEIIT--- ---MPENLGH KRTGSNISGA SSDISLDEQY KHQLEETKKE bmy_16753T0/1-681 DAPEIIT--- ---MPENLGH KRTGSNISGT SSDISLDEQV TL-------- BACU017278/1-1647 DAPEIIT--- ---VPENLGH KRTGSNISGT SSDISLDEQY KHQLEETKKE 1251 1300 ENSTTRP00000003035/1-805 KRTRIPYKPN YSLNLWSIMK NCIGKELSI- -PMPVNFNEP LSMLQRLTED ENSBTAP00000027095/1-692 KRTRIPYKPN YSLNLWSIMK NCIGKELSKI -PMPVNFNEP LSMLQRLTED ENSP00000263847/1-807 KRTRIPYKPN YSLNLWSIMK NCIGKELSKI -PMPVNFNEP LSMLQRLTED bmy_16753T0/1-681 ---------- ----IW---- -----ELPRL RDLGVNFNEP LSMLQRLTED BACU017278/1-1647 KRTRIPYKPN YSLNLWSIMK NCIGKELSKI -PMPVNFNEP LSMLQRLTED 1301 1350 ENSTTRP00000003035/1-805 LEYHELLDRA AKCENSLEQL CYVAAFTVSS YSTTVFRTSK PFNPLLGETF ENSBTAP00000027095/1-692 LEYHELLDRA ATCENSLEQL CYVAAFTVSS YSTTVFRTSK PFNPLLGETF ENSP00000263847/1-807 LEYHELLDRA AKCENSLEQL CYVAAFTVSS YSTTVFRTSK PFNPLLGETF bmy_16753T0/1-681 LEYHELLDRA AKCENSLEQL CYVAAFTVSS YSTTVFRTSK PFNPLLGETF BACU017278/1-1647 LEYHELLDRA AKCENSLEQL CYVAAFTVSS YSTTVFRTSK PFNPLLGETF 1351 1400 ENSTTRP00000003035/1-805 ELDRLEENGY RSLCEQVSHH PPAAAHHAES KNGWTLRQEI KITSKFRGKY ENSBTAP00000027095/1-692 ELDRLEENGY RSLCEQVSHH PPAAAHHAES RNGWTLRQEI KITSKFRGKY ENSP00000263847/1-807 ELDRLEENGY RSLCEQVSHH PPAAAHHAES KNGWTLRQEI KITSKFRGKY bmy_16753T0/1-681 ELDRLEENGY RSLCEQVSHH PPAAAHHAES KNGWTLRQEI KITSKFRGKY BACU017278/1-1647 ELDRLEENGY RSLCEQVSHH PPAAAHHAES KNGWTLRQEI KITSKFRGKY 1401 1450 ENSTTRP00000003035/1-805 LSIMPLGSIH CIFHATGHHY TWKKVTTTVH NIIVGKLWID QSGEIDIVNH ENSBTAP00000027095/1-692 LSIMPLGSIH CIFHATGHHY TWKKVTTTVH NIIVGKLWID QSGEIDIVNH ENSP00000263847/1-807 LSIMPLGTIH CIFHATGHHY TWKKVTTTVH NIIVGKLWID QSGEIDIVNH bmy_16753T0/1-681 LSIMPLGSIH CIFHATGHHY TWKKVTTTVH NIIVGKLWID QSGEIDIVNH BACU017278/1-1647 LSIMPLGSIH CIFHATGHHY TWKKVTTTVH NIIVGKLWID QSGEIDIVNH 1451 1500 ENSTTRP00000003035/1-805 KTGDKCNLKF VPYSYFSRDV ARKVTGEVTD PSGKVHFALL GTWDEKMECF ENSBTAP00000027095/1-692 KTGDKCNLKF VPYSYFSRDV ARKVTGEVTD ASGRVHFALL GTWDEKMDCF ENSP00000263847/1-807 KTGDKCNLKF VPYSYFSRDV ARKVTGEVTD PSGKVHFALL GTWDEKMECF bmy_16753T0/1-681 KTGDKCNLKF VPYSYFSRDV ARKVTGEVTD PSGKVHFALL GTWDEKMECF BACU017278/1-1647 KTGDKCNLKF VPYSYFSRDV ARKVTGEVTD PSGKVHFALL GTWDEKMECF 1501 1550 ENSTTRP00000003035/1-805 KVQPVIGENG GDARQRGHEA EESRVMLWKR NPLPKNAENM YYFSELALTL ENSBTAP00000027095/1-692 KVQPVPGENG GDARQRGHDA EESRVLLWKR NPLPKNAENM YYFSELALTL ENSP00000263847/1-807 KVQPVIGENG GDARQRGHEA EESRVMLWKR NPLPKNAENM YYFSELALTL bmy_16753T0/1-681 KVQPVIGENG GDARQRGHEA EESRVMLWKR NPLPKNAENM YYFSELALTL BACU017278/1-1647 KVQPVIGENG GDARQRGHEA EESRVMLWKR NPLPKNAENM YYFSELALTL 1551 1600 ENSTTRP00000003035/1-805 NAWEAGTAPT DSRLRPDQRL MENGRWDEAN AEKQRLEEKQ RLSRKKREAE ENSBTAP00000027095/1-692 NAWEAGTAPT DSRLRPDQRL MENGRWDEAN AEKQRLEEKQ RLARKRREAE ENSP00000263847/1-807 NAWESGTAPT DSRLRPDQRL MENGRWDEAN AEKQRLEEKQ RLSRKKREAE bmy_16753T0/1-681 NAWEAGTAPT DSRLRPDQRL MENGRWDEAN AEKQRLEEKQ RLSRKKREAE BACU017278/1-1647 NAWEAGTAPT DSRLRPDQRL MENGRWDEAN AEKQRLEEKQ RLSRKKREAE 1601 1650 ENSTTRP00000003035/1-805 AMKATEDGTP YDPYKALWFE RKKDPVTKEL THIYRGGYWE CKEKQDWSSC ENSBTAP00000027095/1-692 AVRATEDGAA HDPYKALWFE RRKDPVTREL THIYRGGYWE CKERQDWDSC ENSP00000263847/1-807 AMKATEDGTP YDPYKALWFE RKKDPVTKEL THIYRGEYWE CKEKQDWSSC bmy_16753T0/1-681 AMKATEDGTP YDPYKALWFE RKKDPVTKEL THIYRGGYWE CKEKQDWSSC BACU017278/1-1647 AMKATEDGTP YDPYKALWFE RKKDPVTKEL THIYRGGYWE CKEKQDWSSC 1651 1700 ENSTTRP00000003035/1-805 PDIF ENSBTAP00000027095/1-692 PDIF ENSP00000263847/1-807 PDIF bmy_16753T0/1-681 PDIF BACU017278/1-1647 PDIF