KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:31:20 2014 Check: 00 .. Name: bmy_11515T0/1-490 Len: 543 Check: 7008 Weight: 1.00 Name: BACU013950/1-237 Len: 543 Check: 6275 Weight: 1.00 Name: ENSP00000327191/1-530 Len: 543 Check: 3619 Weight: 1.00 Name: ENSTTRP00000014635/1-330 Len: 543 Check: 6680 Weight: 1.00 Name: ENSBTAP00000027104/1-531 Len: 543 Check: 7077 Weight: 1.00 // 1 50 bmy_11515T0/1-490 ---------- ---------- ---------- ---------- ---MKMLVSG BACU013950/1-237 ---------- ---------- --MLPEERAD CDPLP---GP RLLVKVHMQV ENSP00000327191/1-530 MAAIKAVNSK AEVARARAAL AVNICAARGL QDVLRTNLGP KGTMKMLVSG ENSTTRP00000014635/1-330 RAEVKGINSK AEVAQAQAAL AVNICAARGL QDVLRTNLGP KGTMKMLVSG ENSBTAP00000027104/1-531 MAAIKAINSK AEVARAQAAL AVNICAARGL QDVLRTNLGP KGTMKMLVSG 51 100 bmy_11515T0/1-490 AGDIKLTKDG NVLLHEMQIQ HATASLIAKV ATAQDDITGD GTTSNVLIIG BACU013950/1-237 ERDIKLTKDG NVLLHEMQIQ HPTASLIAKV ATAQDDITGD GTTSNVLIIG ENSP00000327191/1-530 AGDIKLTKDG NVLLDEMQIQ HPTASLIAKV ATAQDDVTGD GTTSNVLIIG ENSTTRP00000014635/1-330 AGDMKLTKDG NVLLHEMQIQ HPTASLIAKV ATAQDDITGD GTTSNVLIIG ENSBTAP00000027104/1-531 AGDVKLTKDG NVLLHEMQIQ HPTASLIAKV ATAQDDITGD GTTSNVLIIG 101 150 bmy_11515T0/1-490 ELLKQVDLYI SEGLHPRIIT EGFEAPKEKA LQFLEQVKLS KEMDRETLID BACU013950/1-237 ELLKQADLYM SEGLHPRIIA EGFEVAKVKA LEVLEQVKIK KEMKREILLD ENSP00000327191/1-530 ELLKQADLYI SEGLHPRIIA EGFEAAKIKA LEVLEEVKVT KEMKRKILLD ENSTTRP00000014635/1-330 ELLKQADLYI SEGLHPRIIA EGFEVAKIKA LEVLEQVKIK KEMKREILLD ENSBTAP00000027104/1-531 ELLKQADLYI SEGLHPRIIA EGFEIAKIKA LEVLEQVKIK KEMKREILLD 151 200 bmy_11515T0/1-490 VARTSLRTKV HAELADVLTE AVVDSILAIK KQDEPIDLFM VEIMEMKHKS BACU013950/1-237 VARTSLQTKV HPQLADMLTE ---------- ---------- ---------- ENSP00000327191/1-530 VARTSLQTKV HAELADVLTE VVVDSVLAVR RPGYPIDLFM VEIMEMKHKL ENSTTRP00000014635/1-330 VARTSLQTKV HPQLAYVLTE AVVDSVLAIR RPGYPIDLLM VEIMEMKHKS ENSBTAP00000027104/1-531 VARTSLQTKV HPQLADVLTE AVVDSVLAVR RPNYPIDLFM VEIMEMKHKS 201 250 bmy_11515T0/1-490 ETDASLIRGL VLDHGAWHPD MKKRVEDAYI LTCNVSSEYG KTEVNSGFFF BACU013950/1-237 ---------- ---------- ---------- ---------- ---------- ENSP00000327191/1-530 GTDTKLIQGL VLDHGARHPD MKKRVEDAFI LICNVSLEYE KTEVNSG--F ENSTTRP00000014635/1-330 ETDT------ ---------- ---------- ---------- ---------- ENSBTAP00000027104/1-531 ETDTKLIKGL VLDHGARHPD MKKRVDDAFI LTCNVSLEYE KTEVSSG--F 251 300 bmy_11515T0/1-490 FYKSAEEREK LVKAERKFIE DRVKKMIDLK TKVCGDSDKG FVVINQRGID BACU013950/1-237 ---------- ---------- ---------- ---------- ---------- ENSP00000327191/1-530 FYKTAEEKEK LVKAERKFIE DRVQKIIDLK DKVCAQSNKG FVVINQKGID ENSTTRP00000014635/1-330 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000027104/1-531 FYKTAEEKEK LVKAERKFIE DRVQKIIDLK DKVCAQSNKG FVVINQKGID 301 350 bmy_11515T0/1-490 PFSLDALAKE GIVALRRAKR RNVERLTLAC GGVPLNFLDD LNPDCLGHAG BACU013950/1-237 ---------- ---------- ---------- ---------- ---------- ENSP00000327191/1-530 PFSLDSLAKH GIVALRRAKR RNMERLSLAC GGMAVNSFED LTVDCLGHAG ENSTTRP00000014635/1-330 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000027104/1-531 PFSLDALAKH GILALRRAKR RNMERLSLAC GGVAVNSVED LSVDCLGHAG 351 400 bmy_11515T0/1-490 LVYEYTLGEE KFTFIEKCNN PRSVTLLIKG PNKHTLTQIK DAIRDGLRAV BACU013950/1-237 ---------- ---------- ---------- ---------- ---------- ENSP00000327191/1-530 LVYEYTLGEE KFTFIEECVN PCSVTLLVKG PNKHTLTQVK DAIRDGLRAI ENSTTRP00000014635/1-330 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000027104/1-531 LVYEYTLGEE KYTFIEDCIN PRSVTLLVKG PNKHTLTQIK DAVRDGLRAI 401 450 bmy_11515T0/1-490 KNAIDDGCVV PGTGAVEVAM AEALIKYKSS VKGRAQLGVQ AFADALLMIP BACU013950/1-237 ---------- ---------- ---------- ---------- ---------- ENSP00000327191/1-530 KNAIEDGCMV PGAGAIEVAM AEALVTYKNS IKGRARLGVQ AFADALLIIP ENSTTRP00000014635/1-330 -------CVV PGAGAVEVAI AEALVTYKHS IKGRACLGVQ AFADALLIIP ENSBTAP00000027104/1-531 KNAIEDGCVV PGAGAVEVAI AEALVTYKHT IQGRARLGVQ AFADALLIIP 451 500 bmy_11515T0/1-490 KVLAQNSVFD LQETLVKVQA EHSESGQLVG VDLNTDEPMV AAEVGIRDKY BACU013950/1-237 -VLAQNSGYD LQETLVKVQV EHSESKQPVG IDLNTGEPMV AADAGVWDNY ENSP00000327191/1-530 KVLAQNAGYD PQETLVKVQA EHVESKQLVG VDLNTGEPMV AADAGVWDNY ENSTTRP00000014635/1-330 KVLAQNSGYD LQETLVKVQV EHSESKQPVG IDLNTGEPMV AADAGVWDNY ENSBTAP00000027104/1-531 KVLAQNSGYD LQETLVKVQA EHSNSKQPVG IDLNTGEPMV AADAGVWDNY 501 550 bmy_11515T0/1-490 YVKKQLLHSC TVIATNILLV DEIMRAG--- --ISSLKS-- --- BACU013950/1-237 CVKKQLLHSC TAIATNILLV DEIMRAGNIN SSFAPEHGTD FGL ENSP00000327191/1-530 CVKKQLLHSC TVIATNILLV DEIMRAG--- --MSSLK--- --- ENSTTRP00000014635/1-330 FVKNQLLHSC TVIATNILLV DEIMRAG--- --MSSLKG-- --- ENSBTAP00000027104/1-531 CVKKQLLHSC TVIATNILLV DEIMRAG--- --MSSLKG-- ---