KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:31:23 2014 Check: 00 .. Name: ENSP00000037502/1-504 Len: 505 Check: 9921 Weight: 1.00 Name: ENSBTAP00000027111/1-490 Len: 505 Check: 4480 Weight: 1.00 Name: ENSTTRP00000004846/1-487 Len: 505 Check: 7594 Weight: 1.00 Name: bmy_13414T0/1-457 Len: 505 Check: 7298 Weight: 1.00 Name: BACU000674/1-473 Len: 505 Check: 9849 Weight: 1.00 // 1 50 ENSP00000037502/1-504 MRFFCARCCS FGPEMPAVQL L-LLACLVWD VGARTAQLRK ANDQSGRCQY ENSBTAP00000027111/1-490 ---------- ----MPAVQL L-LLACLLGG VGARTAQFQK ANDRSGRCQY ENSTTRP00000004846/1-487 -LRFCARCCH CRPEMPAVQL LLLLACLVWG VGARTAQFRK ANDRSGRCQY bmy_13414T0/1-457 ---------- ----MPAVQL L-LLACLVWG VGARTAQFRK ANDRSGRCQY BACU000674/1-473 ---------- ----MPAVQL L-LLVCLVWG VGARTAQFRK ANDRSGRCQY 51 100 ENSP00000037502/1-504 TFSVASPNES SCPEQSQAMS VIHNLQRDSS TQRLDLEATK ARLSSLESLL ENSBTAP00000027111/1-490 TFSVASPSES SCPEQGQAML AIQELQRDSS EQRATLESTK ARLSSLEALL ENSTTRP00000004846/1-487 TFSVASPNES SCLEQGQAMS AIQDLQRDSS EQRAALESTK ARLSYLEALL bmy_13414T0/1-457 TFSVASPNES SCPEQGQAMS AIQDLQRDSS EQRAALESTK ARLSSLEALL BACU000674/1-473 TFSVASPNES SCPEQGQAMS AIQDLQRDSS EQRAALESTE ARLSSLEALL 101 150 ENSP00000037502/1-504 HQLTLDQAAR PQETQEGLQR ELGTLRRERD QLETQTRELE TAYSNLLRDK ENSBTAP00000027111/1-490 HRLTSGQPAG PLETHQGLQR ELEALRRERE QLETQTQELE SAYSNLVRDK ENSTTRP00000004846/1-487 HRLTLGQAAT PWDTQEGLQK E--------- --------LE LAYSNLVRDK bmy_13414T0/1-457 HRLTSGQAAA PWDTQEGLQR E--------- --------LE LAYRDLVRDK BACU000674/1-473 HRLTSGQAAA PWDTQEGLQR E--------- --------LE LAYRDLVRDK 151 200 ENSP00000037502/1-504 SVLEEEKKRL RQENENLARR LESSSQEVAR LRRGQCPQTR DTARAVPPGS ENSBTAP00000027111/1-490 SALEEEKRRL QAENEDLARR LESSSQEVAS LRRGQCPQAH SSSQDVPSGS ENSTTRP00000004846/1-487 SALEEEKRRL EAENGDLARR LESSSEEVAS LRRGLCPQAR STSEDVPPGS bmy_13414T0/1-457 SALEEEKRRL QAENGDLARR LESSSKEVAR LRRGQCPQAR STSEDVPPGS BACU000674/1-473 SALEEEKRRL QAENGDLARR LESSSKEVAR LRRGQCPQAR STSEDVPPGS 201 250 ENSP00000037502/1-504 REVSTWNLDT LAFQELKSEL TEVPASRILK ESPSGYLRSG EGDTGCGELV ENSBTAP00000027111/1-490 REVAKWNLEN MDFQELKSEL TEVPASQILK ESPSGHPRNE EGGTGCGELV ENSTTRP00000004846/1-487 KEVSKWNLEN VDFQELKSEL TEVPASRILK ESPSGQPRSE EGGTGCGELI bmy_13414T0/1-457 KEVSKWNLEN VGFQELKSEL TEVPASRILK ESASGHPRSE EGG------- BACU000674/1-473 KEVSKWNLEN VDFQELKSEL TEVPASRILK ESPSGHPRSE EGGTGCGELI 251 300 ENSP00000037502/1-504 WVGEPLTLRT AETITGKYGV WMRDPKPTYP YTQETTWRID TVGTDVRQVF ENSBTAP00000027111/1-490 WVGEPITLRT AETITGKYGV WMRDPQATFP YTGETTWRID TVGTDIRQVF ENSTTRP00000004846/1-487 WVGEPVTLRT AETLTGKYGV WMRDPQAAYP YTQETTWRID TVGTDIRQVF bmy_13414T0/1-457 ---------T AETLTGKYGV WMRDPKAAYP YTQETTWRID TVGTDVRQVF BACU000674/1-473 WVGEPVTLRT AETLTGKYGV WMRDPKAAYP YTQETTWRID TVGTDVRQVF 301 350 ENSP00000037502/1-504 EYDLISQFMQ GYPSKVHILP RPLESTGAVV YSGSLYFQGA ESRTVIRYEL ENSBTAP00000027111/1-490 EYDHIRQFTQ GYPSKVHVLP RPLESTGAVV YRGSLYFQAA ESRTVLRYDL ENSTTRP00000004846/1-487 EYDLISQFLQ GYPSKVHVLP RPLESTGAVV YQGSLYFQAA ESRTVIRYEL bmy_13414T0/1-457 EYDLISQFLQ GYPSKVHVLP RPLESTGAVV YQGSLYFQAE ESRTVIRYEL BACU000674/1-473 EYDLISQFLR GYPSKVHVLP RPLESTGAVV YQGSLYFQGE ESRTVIRYEL 351 400 ENSP00000037502/1-504 NTETVKAEKE IPGAGYHGQF PYSWGGYTDI DLAVDEAGLW VIYSTDEAKG ENSBTAP00000027111/1-490 RTETLKAEKE IPGAGYHGQF PYSWGGYTDI DLAVDEIGLW VIYSTEAAKG ENSTTRP00000004846/1-487 RTETLKAEKE IPGAGYHGQF PYSWGGYTDI DLAVDETGLW VIYSTEAAKG bmy_13414T0/1-457 RTETLKAEKE IPGAGYHGQF PYSWGGYTDI DLAVDETGLW VIYSTEAAKG BACU000674/1-473 RTETLKAEKE IPGAGYHGQF PYSWGGYTDI DLAVDETGLW VIYSTEAAKG 401 450 ENSP00000037502/1-504 AIVLSKLNPE NLELEQTWET NIRKQSVANA FIICGTLYTV SSYTSADATV ENSBTAP00000027111/1-490 AIVLSKLNPE TLELEQTWET NIRKQSVANA FIICGTLYTV SSYSSPDATV ENSTTRP00000004846/1-487 AIVLSKLNPE NLELEQTWET NIRKQSVANA FIICSTLYTI SSYSLPDATV bmy_13414T0/1-457 AIVLSKLNPE NLELEQTWET NIRKQSVANA FIICSTLYTI SSYSLPDATV BACU000674/1-473 AIVLSKLNPE NLELEQTWET NIRKQSVANA FIICSTLYTI SSYSLPDATV 451 500 ENSP00000037502/1-504 NFAYDTGTGI SKTLTIPFKN RYKYSSMIDY NPLEKKLFAW DNLNMVTYDI ENSBTAP00000027111/1-490 NFAYDTGTGS SKALTVPFKN RYKYSSMIDY NPLERKLFAW DNFNMVSYDI ENSTTRP00000004846/1-487 NFAYDTSTGS SKALMVPFKN RYKYSSMIDY NPLEKKLFAW DNFNMVTYDI bmy_13414T0/1-457 NFAYDTGTGS SKALTVPFKN RYEYSSMIDY NPLEKKLFAW DNFNMVTYDI BACU000674/1-473 NFAYDTGTGS SKALTVPFKN RYKYSSMIDY NPLEKKLFAW DNFNMVTYDI 501 550 ENSP00000037502/1-504 KLSKM ENSBTAP00000027111/1-490 KLSRL ENSTTRP00000004846/1-487 RLSQV bmy_13414T0/1-457 RLSQM BACU000674/1-473 RLSQM