KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:31:24 2014 Check: 00 .. Name: ENSBTAP00000027122/1-319 Len: 336 Check: 794 Weight: 1.00 Name: ENSP00000343877/1-330 Len: 336 Check: 3403 Weight: 1.00 Name: bmy_05033T0/1-246 Len: 336 Check: 3451 Weight: 1.00 Name: ENSTTRP00000012788/1-313 Len: 336 Check: 6973 Weight: 1.00 // 1 50 ENSBTAP00000027122/1-319 ---------- -MEQVP---- --QVFHEQGI LFGYRHPQSS ATACLLSLFQ ENSP00000343877/1-330 MLSLKLPRLF SIDQIP---- --QVFHEQGI LFGYRHPQSS ATACILSLFQ bmy_05033T0/1-246 MFLLRPSRHP LVSPRRPFLF PLQVFHEQGI LFGYRHPQSS ATACLLSLFQ ENSTTRP00000012788/1-313 ---------- ---------- ---VFHEQGI LFGYRHPQSS ATACLLSLFQ 51 100 ENSBTAP00000027122/1-319 MTNETLNIWT HLLPFWFFSW RFVSTLQVTD ILNDSYSWPL LVYMGASCLF ENSP00000343877/1-330 MTNETLNIWT HLLPFWFFAW RFVTALYMTD IKNDSYSWPM LVYMCTSCVY bmy_05033T0/1-246 MTNETLNIWT HLLPFWFFTW RFVSTLRVTD VLNDSYAWPL LVYMGASCVY ENSTTRP00000012788/1-313 MTNETLNIWT HLLPFWFFMW RFVGTLRVTD VLNDSYSWPL LVYMGASCVY 101 150 ENSBTAP00000027122/1-319 PLASSCAHTF SSMSRNARHI CYFLDYGAVN LFSLGCAIAY SAYVFPDTLV ENSP00000343877/1-330 PLVSSCAHTF SSMSKNARHI CYFLDYGAVN LFSLGSAIAY SAYTFPDALM bmy_05033T0/1-246 PLASSCAHTF SSMSRNARHI CYFLDYGAVN LFSLGSAIAY SAYVFPDALV ENSTTRP00000012788/1-313 PLASSCAHTF SSMSRNARHI CYFLDYGAVN LFSLGSAIAY SAYVFPDALV 151 200 ENSBTAP00000027122/1-319 STTFHDYYLT LAVLNTIISI WLSCYSRFFE IQKPGICKML RVLAFAFPYT ENSP00000343877/1-330 CTTFHDYYVA LAVLNTILST GLSCYSRFLE IQKPRLCKVI RVLAFAYPYT bmy_05033T0/1-246 NTVFHDYYVA LAVLNTSIST GLSCYSRFLE VQKPRLCKML RVLAFAYPYT ENSTTRP00000012788/1-313 NTVFHDYYVA LAVLNTIIST GLSCYSRFLE VQKPRLCKML RVLAFAYPYT 201 250 ENSBTAP00000027122/1-319 WDSLPVLFRV FLLPWESAEN EATVYHQKHV AMTLLASFFY SAHLPERLAP ENSP00000343877/1-330 WDSLPIFYRL FLFPGESAQN EATSYHQKHM IMTLLASFLY SAHLPERLAP bmy_05033T0/1-246 WDSLPIFSR- ---------N EATLYHQKHM AMTLLASFLY SAHLPERLAP ENSTTRP00000012788/1-313 WDSLPIFSRL FLFPGESAQN EATLYHQKHM AVTLLASFLY SAHLPERLAP 251 300 ENSBTAP00000027122/1-319 GRFDYIGHSH QLFHVCVILA THMQMEAILL DKTLRKEWLL THCRPLVFAQ ENSP00000343877/1-330 GRFDYIGHSH QLFHVCVILA THMQMEAILL DKTLRKEWLL ATSKPFSFSQ bmy_05033T0/1-246 GRFDYI---- ---------- ---------- ---------- ---------- ENSTTRP00000012788/1-313 GRFDYIGHSH QLFHVCVILA THMQMEAILL DKTLRREWLL AHSRPLLFSQ 301 350 ENSBTAP00000027122/1-319 IAGAILLCLI FSLSNIVYFS AALYRIPEPE LHKKET ENSP00000343877/1-330 IAGAILLCII FSLSNIIYFS AALYRIPKPE LHKKET bmy_05033T0/1-246 ---------- ---------- ---------- ------ ENSTTRP00000012788/1-313 IAGAILLCLI FSLSNIIYFS AALYRIPEPE LHKKET