KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:31:27 2014 Check: 00 .. Name: BACU005001/1-189 Len: 498 Check: 3909 Weight: 1.00 Name: bmy_09319T0/1-320 Len: 498 Check: 4965 Weight: 1.00 Name: ENSTTRP00000008245/1-490 Len: 498 Check: 5264 Weight: 1.00 Name: ENSP00000355577/1-490 Len: 498 Check: 3074 Weight: 1.00 Name: ENSBTAP00000027138/1-490 Len: 498 Check: 2939 Weight: 1.00 // 1 50 BACU005001/1-189 MDVRASSDEE KWQRRGACAR VGVRVRVTSS AGISPDLSLP FYAARPRPSF bmy_09319T0/1-320 ---------- ---------- ---------- ---------- ---------M ENSTTRP00000008245/1-490 MGIREFPGGA P---GGKSIA IGMRRSPDVS PRRLSDISPQ LRQLKYLVVD ENSP00000355577/1-490 MGIREFPSGA P---RGKSIA VGMRRSPDVS PRRLSDISPQ LRQLKYLVVD ENSBTAP00000027138/1-490 MGIREFPGSA P---RGKGIA IGMRRSPDVS PRRLSDISPQ LRQLKYLVVD 51 100 BACU005001/1-189 CFLRLFLLWS QRTLVALSSE FVLQS----- ---------- --NLSICREE bmy_09319T0/1-320 ESIQ--LNW- ---------- ---------- ---------- ---------- ENSTTRP00000008245/1-490 EAIKEDLKWS RSVEDLTSGP VGLTSIEERI LRITGYYGYQ PWAASYKREE ENSP00000355577/1-490 EAIKEDLKWS RSVEDLTSGP VGLTSIEERI LRITGYYGYQ PWAASCKREE ENSBTAP00000027138/1-490 EAIKEDLKWS RSVEDLTSGP VGLTSIEERI LRITGYYGYQ PWATSYKREE 101 150 BACU005001/1-189 RPRDPPGPAE AQAPVGTDPG GRPSPRCWRC SQAQLKKIFW GVAVVLCVCS bmy_09319T0/1-320 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000008245/1-490 RPRDPPGPAE AQAPVGTDTG GRPSPRCWRC SQAQLKKIFW GVAVVLCVCS ENSP00000355577/1-490 RPRDSPGPAE AQAPAGVEAG GRASRRCWTC SRAQLKKIFW GVAVVLCVCS ENSBTAP00000027138/1-490 RPRDSPGPAE AQVPAGTEAG GRPSRHCWRC SRAQLKKIFW GVAVVLCVCA 151 200 BACU005001/1-189 SWAGATQLAK LTFRKFDAPF TLTWFATNWN FLFFPLYYAG HVCKSAEKQS bmy_09319T0/1-320 ---------- -----FHGKF ------SDLN VLYLP----- ---------A ENSTTRP00000008245/1-490 SWAGATQLAK LTFRKFDAPF TLTWFATNWN FLFFPLYYAG HVCKSAEKQS ENSP00000355577/1-490 SWAGSTQLAK LTFRKFDAPF TLTWFATNWN FLFFPLYYVG HVCKSTEKQS ENSBTAP00000027138/1-490 SWAGATQLAK LTFRKFDAPF TLTWFATNWN FLFFPLYYAG HICKSAEKQS 201 250 BACU005001/1-189 VKQRYR---- ---------- ---------- ---------- ---------- bmy_09319T0/1-320 AGLQATECCR FFGDNGLTLK VFFTKAAPFG VLWTLTNYLY LHAIKKINTT ENSTTRP00000008245/1-490 VKQRYRECCR FFGDNGLTLK VFFTKAAPFG VLWTLTNYLY LHAIKKINTT ENSP00000355577/1-490 VKQRYRECCR FFGDNGLTLK VFFTKAAPFG VLWTLTNYLY LHAIKKINTT ENSBTAP00000027138/1-490 VKQRYRECCR FFGDNGLTLK VFFTKAAPFG VLWTLTNYLY LHAIKKINTT 251 300 BACU005001/1-189 ---------- ---------- ---------- ---------- ---------- bmy_09319T0/1-320 DVSVLFCCNK AFVFLLSWIV LRDRFMGVRI VAAILAIAGI VMMTYADGFH ENSTTRP00000008245/1-490 DVSVLFCCNK AFVFLLSWIV LRDRFMGVRX XXXXXXXXXX VMMTYADGFH ENSP00000355577/1-490 DVSVLFCCNK AFVFLLSWIV LRDRFMGVRI VAAILAIAGI VMMTYADGFH ENSBTAP00000027138/1-490 DVSVLFCCNK AFVFLLSWIV LRDRFMGVRI VAAILAIAGI VMMTYADGFH 301 350 BACU005001/1-189 ---------- ---------- ---------- ---------- ---------- bmy_09319T0/1-320 SHSVIGIALV VGSASMSALY KVLFKLLLGS AKFGEAALFL SILGVFNILF ENSTTRP00000008245/1-490 SHSVIGIALV VGSASVSALY KVLFKLLLGS AKFGEAALFL SILGVFNILF ENSP00000355577/1-490 SHSVIGIALV VASASMSALY KVLFKLLLGS AKFGEAALFL SILGVFNILF ENSBTAP00000027138/1-490 SHSVIGIALV VGSASMSALY KVLFKLLLGS AKFGEAALFL SILGVFNILF 351 400 BACU005001/1-189 ---------- ---------- ---------- ---------- ---------- bmy_09319T0/1-320 ITCIPVILYF TKVEYWSSFD DIPWGNLCGF SVLLLSKWRS PCQDHQRAGT ENSTTRP00000008245/1-490 ITCIPVILYF TKVEHWSSFD DIPWGNLXXX XXXXXX---- -FNIVLNFGI ENSP00000355577/1-490 ITCIPIILYF TKVEYWSSFD DIPWGNLCGF SVLLLT---- -FNIVLNFGI ENSBTAP00000027138/1-490 ITCIPVILYF TKVEYWSSFD DIPWGNLCGF SVLLLT---- -FNIVLNFGI 401 450 BACU005001/1-189 ---------- ---------- ---------- ---------- ---------- bmy_09319T0/1-320 DRAASGQLK- GSLWKPVIQY FVDRYTSKIV FNGVRVVAMV IIGLGFLLLL ENSTTRP00000008245/1-490 AVTYPTLMSL GIVLSVPVNA VVDRYTSKIV FNGVRVIAMV IIGLGFLLLL ENSP00000355577/1-490 AVTYPTLMSL GIVLSIPVNA VIDHYTSQIV FNGVRVIAII IIGLGFLLLL ENSBTAP00000027138/1-490 AVTYPTLMSL GIVLSVPVNA VVDHYTSKIV FNGVRVIAII IIGLGFLLLL 451 500 BACU005001/1-189 ---------- ---------- ---------- ---------- -------- bmy_09319T0/1-320 LPEEWDVWLI KLLTRLKVRK KEEAAEGGAD LGSGPQNKSG RARPSFAR ENSTTRP00000008245/1-490 LPEEWDVWLM KLLTRLKVRK KEEAAEGGAD LGSGPQNKGG RARPSFAR ENSP00000355577/1-490 LPEEWDVWLI KLLTRLKVRK KEEPAEGAAD LSSGPQSKNR RARPSFAR ENSBTAP00000027138/1-490 LPEEWDVWLI KLLTRLKVRK KEEAAEGGAD LGLGLQSKSR RARPSFAR