KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:31:28 2014 Check: 00 .. Name: ENSP00000454836/1-808 Len: 815 Check: 3027 Weight: 1.00 Name: ENSBTAP00000027147/1-800 Len: 815 Check: 6331 Weight: 1.00 Name: ENSTTRP00000010806/1-804 Len: 815 Check: 7086 Weight: 1.00 Name: bmy_02699T0/1-778 Len: 815 Check: 6634 Weight: 1.00 Name: BACU009216/1-771 Len: 815 Check: 2661 Weight: 1.00 // 1 50 ENSP00000454836/1-808 --MAETAAGV G-----RFKT NYAVERKIEP FYKGGKAQLD QTGQHLFCVC ENSBTAP00000027147/1-800 --MAEVAAGV G-----RFKS NYAVERKIEP FYKGGKVQLD QTGQHLFCVC ENSTTRP00000010806/1-804 --MAEAAAGV G-----RFKS NYAAERKIEP FYKGGKVQLD QTGQHLFCVC bmy_02699T0/1-778 AGLGTEDQGV GGSLSPRLSS SYAVERKIEP FYKGGKVQLD QTGQHLFCVC BACU009216/1-771 --MAEAAAGV G-----RFKS NYAVERKIEP FYKGGKVQLD QTGQHLFCVC 51 100 ENSP00000454836/1-808 GTRVNILEVA SGAVLRSLEQ EDQEDITAFD LSPDNEVLVT ASRALLLAQW ENSBTAP00000027147/1-800 GTRVNILDVA SGAVLRSLEQ EDQEDITAFD LSPDDKVLVT ASRALLLAQW ENSTTRP00000010806/1-804 GTRVNILDVA SGTMLQSLEQ EDQEDITAFD LSPDDKVLVT ASRALLLAQW bmy_02699T0/1-778 GTRVNILDVA SGTMLQSLEQ EDQEDITAFD LSPDDKVLVT ASRALLLAQW BACU009216/1-771 GTRVNILDVA SGTMLQSLEQ EDQEDITAFD LSPDDKVLVT ASRALLLAQW 101 150 ENSP00000454836/1-808 AWQEGSVTRL WKAIHTAPVA TMAFDPTSTL LATGGCDGAV RVWDIVRHYG ENSBTAP00000027147/1-800 AWQEGSVTRL WKAIHTAPVA TMAFDPTSTL LATGGCDGAV RVWDVVRCYG ENSTTRP00000010806/1-804 AWQEGSITRL WKAIHTAPVA TMAFDPTSTL LATGGCDGAV RVWDVVQHYG bmy_02699T0/1-778 AWQEGSITRL WKAIHTAPVA TMAFDPTSTL LATGGCDGAV RVWDVVRHYG BACU009216/1-771 AWQEGSITRL WKAIHTAPVA TMAFDPTSTL LATGGCDGAV RVWDVVRHYG 151 200 ENSP00000454836/1-808 THHFRGSPGV VHLVAFHPDP TRLLLFSSAT DAAIRVWSLQ DRSCLAVLTA ENSBTAP00000027147/1-800 THHFRGSPGV VHLVAFHPDP ARLLLFSSAA DTSIRVWSLQ ERSCLAVLTA ENSTTRP00000010806/1-804 THHFRGSPGV IHLVAFHPDP ARLLLFSSAA DTSIRVWSLQ DRSCLAMLTA bmy_02699T0/1-778 THHFRGSPGV IHLVAFHPDP ARLLLFSSAA DTSIRVWSLQ DQSCLAMLTA BACU009216/1-771 THHFRGSPGV IHLVAFHPDP ARLLLFSSAA DTSIRVWSLQ EQSCLAVLTA 201 250 ENSP00000454836/1-808 HYSAVTSLAF SADGHTMLSS GRDKICIIWD LQSCQATRTV PVFESVEAAV ENSBTAP00000027147/1-800 HYSAVTSLTF SADGHTMLSS GRDKICVIWD LRSLQATRTV PVFESVEAAV ENSTTRP00000010806/1-804 HYSAVTSLTF SADGHTMLSS GRDKICIVWD LQSLQATRTV PVFESVEAAV bmy_02699T0/1-778 HYSAVTSLTF SADGHTMLSS GRDKICIVWD LQSLQATRTV PVFESVEAAV BACU009216/1-771 HYSAVTSLTF SADGHTMLSS GRDKICIVWD LQSLQATRTV PVFESVEAAV 251 300 ENSP00000454836/1-808 LLPEEPVSQL GVKSPGLYFL TAGDQGTLRV WEAASGQCVY TQAQPPGPGQ ENSBTAP00000027147/1-800 LLPEEPAPEL GVKSAGLHFL TAGDQGALRV WEAASGRCVH AQQRLRGPGR ENSTTRP00000010806/1-804 LLPEEPAPEL GVKSAGLHFL TAGDQXXXXX XXXXXXXXXX XXXQLPV-GR bmy_02699T0/1-778 LLPEEPAPEL GVKSAGLHFL TAGDQGTLRV WEAASGRCVH AQRQLPGPGR BACU009216/1-771 LLPEEPAPEL GVKSAGLHFL TAGDQGTLRV WEASSGQCVH AQRQLPGPGQ 301 350 ENSP00000454836/1-808 ELTHCTLAHT AGVVLTATAD HNLLLYEARS LRLQKQFAGY SEEVLDVRFL ENSBTAP00000027147/1-800 ELTHCTLAHA AGLLLSVTAD HNLLLYDAHS LRLRKQFAGY SEEVLDVRFL ENSTTRP00000010806/1-804 ELTHCTLARA AGA-LSVTAD HNVLLYEARS LQLQKQFAGY SEEVLDVRFL bmy_02699T0/1-778 ELTHCTLARA AGLLLSVTAD HNLLLYEARS LQLQKQFAGY SEEVLDVRFL BACU009216/1-771 ELTHCTLARA AGLLLSVTAD HNLLLYEARS LQLQKQFAGY SEEVLDVRFL 351 400 ENSP00000454836/1-808 GPEDSHVVVA SNSPCLKVFE LQTSACQILH GHTDIVLALD VFRKGWLFAS ENSBTAP00000027147/1-800 GPEDSHVVVA SNSPCLKVFD LQTSACQILH GHTDIVLALD VFRKGRLFAS ENSTTRP00000010806/1-804 GPKDSHVVVA SNSPCLKVFE LQTSACQILH GHTDIVLALD VFRKGWLFVS bmy_02699T0/1-778 GPEDSHVVVA SNSPCLKVFE LQTSACQILH GHTDIVLALD VFRKGWLFVS BACU009216/1-771 GPEDSHVVVA SNSPCLKVFE LQTSACQILH GHTDIVLALD VFRKGWLFVS 401 450 ENSP00000454836/1-808 CAKDQSVRIW RMNKAGQVMC VAQGSGHTHS VGTVCCSRLK ESFLVTGSQD ENSBTAP00000027147/1-800 CAKDQSIRVW RMNKSGEVAC VAQGSGHTHS VGTICCSRLK ETFLVTGSQD ENSTTRP00000010806/1-804 CAKDQSICVW RMNKAGEVAC VAQGSGHTHS VGTICCSRLK ETFLVTGSQD bmy_02699T0/1-778 CAKVKH---- ---------- ---------- -----HERLK ETFLVTGSQD BACU009216/1-771 CAKVKH---- ---------- ---------- -----HERLK ETFLVTGSQD 451 500 ENSP00000454836/1-808 CTVKLWPLPK ALLSKNTAPD NGPILLQAQT TQRCHDKDIN SVAIAPNDKL ENSBTAP00000027147/1-800 CTVKLWPLPE ALLSKGTGHE GGPVFLQAQA TQRCHDKDIN SVAVAPNDKL ENSTTRP00000010806/1-804 CTVKLWPLPE ALSSKSTGPD GGPVLLQAQA TQHCHDKDIN SVAIAPNDKL bmy_02699T0/1-778 CTVKLWPLPE ALPSKSTGPD GGPVLLQAQA TQHCHDKDIN SVAIAPNDKL BACU009216/1-771 CTVKLWPLPE ALPSKSTGPD GGPVLLQAQA TQHCHDKDIN SVAIAPNDKL 501 550 ENSP00000454836/1-808 LATGSQDRTA KLWALPQCQL LGVFSGHRRG LWCVQFSPMD QVLATASADG ENSBTAP00000027147/1-800 LATGSQDRTA KLWALPRCQL LGTFSGHRRG LWCVQFSPMD QVLATASADG ENSTTRP00000010806/1-804 LATGSQDRTA KLWALPQCQL LGVFSGHRRG LWCVQFSPMD QVLATASADG bmy_02699T0/1-778 LATGSQDRTA KLWALPQCQL LGVFSGHRRG LWCVQFSPMD QVLATASADG BACU009216/1-771 LATGSQDRTA KLWALPQCQL LGVFSGHRRG LWCVQFSPMD QVLATASADG 551 600 ENSP00000454836/1-808 TIKLWALQDF SCLKTFEGHD ASVLKVAFVS RGTQLLSSGS DGLVKLWTIK ENSBTAP00000027147/1-800 TIKLWALQDF SCLKTFEGHD ASVLKVAFVS RGTQLLSSGS DGLLKLWTIK ENSTTRP00000010806/1-804 TVKLWALQDF SCLKTFEGHD ASVLKVAFVS RGTQLLSSGS DGLVKLWTIK bmy_02699T0/1-778 TVKLWALQDF SCLKTFEGHD ASVLKVAFVS RGTQLLSSGS DGLVKLWTIK BACU009216/1-771 TVKLWALQDF SCLKTFEGHD ASVLKVAFVS RGTQLLSSGS DGLVKLWTIK 601 650 ENSP00000454836/1-808 NNECVRTLDA HEDKVWGLHC SRLDDHALTG ASDSRVILWK DVTEAEQAEE ENSBTAP00000027147/1-800 NNECVRTLDA HEDKVWGLHC SRLDDRALTG ASDSRVVLWK DVTEAEQAEE ENSTTRP00000010806/1-804 NNECVRTLDA HEDKVWGLHC SRLDDHALTG ASDSCVILWK DVTEVEQAEE bmy_02699T0/1-778 NNECVRTLDA HEDKVWGLHC SRLDDHALTG ASDSCVILWK DVTEAEQAEE BACU009216/1-771 NNECVRTLDA HEDKVWGLHC SRLDDHALTG ASDSCVILWK DVTEAEQAEE 651 700 ENSP00000454836/1-808 QARQEEQVVR QQELDNLLHE KRYLRALGLA ISLDRPHTVL TVIQAIRRDP ENSBTAP00000027147/1-800 QAKREEQVVK QQELDNLLHE KRYLRALGLA ISLDRPHTVL TVIQAIRRDP ENSTTRP00000010806/1-804 QAKREEQMVK QQELDNLLHE KRYLQALGLA ISLDRPHTVL TVIQAIQRDP bmy_02699T0/1-778 QAKREEQVVK QQELDNLLHE KRYLRALGLA ISLDRPHTVL TVIQAIQRDP BACU009216/1-771 QAKREEQVVK QQELDNLLHE KRYLRALGLA ISLDRPHTVL TVIQAIQRDP 701 750 ENSP00000454836/1-808 EACEKLEATM LRLRRDQKEA LLRFCVTWNT NSRHCHEAQA VLGVLLRREA ENSBTAP00000027147/1-800 ESCEKLETTV LQLRRDQKEA LLRFCVTWNT NSRHCHEAQA VLGVLLRHEA ENSTTRP00000010806/1-804 EACEKLEATV LQLRRDQKEA LLRFCVTWNT NSRHCHEAQA VLAVLLQHEA bmy_02699T0/1-778 ESCEKLEATV LQLRRDQKEA LLRFCVTWNT NSRHCHEAQA VLGVLLRHEA BACU009216/1-771 ESCEKLEATV LQLRRDQKEA LLCFCVTWNT NSRHCHEAQA VLGVLLRHEA 751 800 ENSP00000454836/1-808 PEELLAYEGV RAALEALLPY TERHFQRLSR TLQAAAFLDF LWHNMKLPVP ENSBTAP00000027147/1-800 PDELLTYDGV RASLEGLLPY TERHFQRLSR MLQAATFLDF LWHNMKLPAL ENSTTRP00000010806/1-804 PEELLAYDGV RASLEALLPY TERHFQRLSR MLQAATFLDF LWHNMKLPTL bmy_02699T0/1-778 PEELLAYDGV RASLEALLPY TERHFQRLSR MLQAATFLDF LWHNMKLPTL BACU009216/1-771 PEELLAYDGV RASLEALLPY TERHFQRLSR MLQAATFLDF LWHNMKLPTL 801 850 ENSP00000454836/1-808 AAAPTPWETH KGALP ENSBTAP00000027147/1-800 PTAPAAL--- ----- ENSTTRP00000010806/1-804 PAAPAALNTP KHV-- bmy_02699T0/1-778 PAAPAAL--- ----- BACU009216/1-771 PAAPVAL--- -----