KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:31:28 2014 Check: 00 .. Name: ENSBTAP00000027152/1-317 Len: 320 Check: 6325 Weight: 1.00 Name: ENSP00000217455/1-319 Len: 320 Check: 9763 Weight: 1.00 Name: bmy_06260T0/1-228 Len: 320 Check: 6882 Weight: 1.00 Name: BACU020389/1-317 Len: 320 Check: 8764 Weight: 1.00 Name: ENSTTRP00000015159/1-315 Len: 320 Check: 3138 Weight: 1.00 // 1 50 ENSBTAP00000027152/1-317 MSPPQDPEDE QGGGD---PP GDLRSVLVTS VLNLEPLDED LFRGTHYWVP ENSP00000217455/1-319 MSSPQAPEDG QGCGDRGDPP GDLRSVLVTT VLNLEPLDED LFRGRHYWVP bmy_06260T0/1-228 MSSPQALEDE QGDGD---PP RDLRSVLVTS VLNLELLDED LFRGRHYWVP BACU020389/1-317 MSSPQALEDE RGGGD---PP RDLRSVLVTS VLNLELLDED LFRGRHYWVP ENSTTRP00000015159/1-315 MSSPQALEDE QGGGD---PP RDLRSVLVTS VLNLELLDED LFRGRHYWVP 51 100 ENSBTAP00000027152/1-317 STERLFGGQI VGQALVAAAK SVSEDVHVHS LHCYFVRTGD PKVPVLYQVE ENSP00000217455/1-319 A-KRLFGGQI VGQALVAAAK SVSEDVHVHS LHCYFVRAGD PKLPVLYQVE bmy_06260T0/1-228 STQRLFGGQI VGQALVAAAK SVSEDVHVHS LHCYFVRKGD PKVPVLYQVE BACU020389/1-317 STQRLFGGQI VGQALVAAAK SVSEDVHVHS LHCYFVRKGD PKVPVLYQVE ENSTTRP00000015159/1-315 SNQRLFGGQI VGQALVAAAK SVTEDVHVHS LHCYFVRKGD PKVPVLYQVE 101 150 ENSBTAP00000027152/1-317 RTRTGASFSV RFVKAVQHGR PIFICQASFQ KAQPSPVQHQ FSMPAVPPPE ENSP00000217455/1-319 RTRTGSSFSV RSVKAVQHGK PIFICQASFQ QAQPSPMQHQ FSMPTVPPPE bmy_06260T0/1-228 RTRTGVSFSV RSVKAVQHGR PIFICQVSFQ KAQPSPVQHQ FSMPTVPPPE BACU020389/1-317 RTRTGVSFSV RSVKAVQHGR PIFICQVSFQ KAQPSPVQHQ FSMPTVPPPE ENSTTRP00000015159/1-315 RTRTGVSFSV RSVKAVQHGR PIFICQASFQ KAQPSPVQHQ FSMPTVPPPE 151 200 ENSBTAP00000027152/1-317 EVVGREDFIG QFLRDPELQE RYRVGLNRIA AQEVPIEIKV VNPSTPSQLK ENSP00000217455/1-319 ELLDCETLID QYLRDPNLQK RYPLALNRIA AQEVPIEIKP VNPSPLSQLQ bmy_06260T0/1-228 ELLDHEALIN QYLRDPNLQE KYRVGLNRIA AQEVPIEIKL VNVPTLSQLQ BACU020389/1-317 ELLGHEALIN QYLRDPNLQE KYRVGLNRIA AQEVPIEIKL VNLPTLSQLQ ENSTTRP00000015159/1-315 ELLGHEALIN QYLRDPNLQE KYRVGLNRIA AREVPIEIKL VNLPTLSQLQ 201 250 ENSBTAP00000027152/1-317 KMEPKQMFWV RARGYIGEGD MKMHCCVAAY ISDFAFLGTA MLPHHWKYKV ENSP00000217455/1-319 RMEPKQMFWV RARGYIGEGD MKMHCCVAAY ISDYAFLGTA LLPHQWQHKV bmy_06260T0/1-228 SMEPKQMFWV RARGYIGK-- ---------- ---------- ---------- BACU020389/1-317 SMEPKQMFWV RARGYIGEGD MKMHCCVAAY ISDYAFLGTA LLPHQWQHKV ENSTTRP00000015159/1-315 SMEPKQMFWV RARGYIGEGD MKMHCCVAAY ISDYAFLGTA LLPHQLQHKV 251 300 ENSBTAP00000027152/1-317 GFMVSLDHSM WFHAPFRADH WMLYECESPW AGGSRGLVHG RLWRQDGVLA ENSP00000217455/1-319 HFMVSLDHSM WFHAPFRADH WMLYECESPW AGGSRGLVHG RLWRQDGVLA bmy_06260T0/1-228 ---------- ---------- ------RTPW PERKRS---- ---------- BACU020389/1-317 HFMVSLDHSM WFHAPFRADH WMLYECESPW AGGSRGLVHG RLWRRDGVLA ENSTTRP00000015159/1-315 HFMVSLDHSM WFHAPFRADH WMLYECESPW AGGSRGLVHG RLWRRDGVLA 301 350 ENSBTAP00000027152/1-317 VSCAQEGVIR VKPWDSTSKL ENSP00000217455/1-319 VTCAQEGVIR VKPQVSESKL bmy_06260T0/1-228 -----PGV-- ---------- BACU020389/1-317 MSCAQEGVIR VKPRDSKSKL ENSTTRP00000015159/1-315 MSCAQEGVIR VKPRD--SKL