KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:31:30 2014 Check: 00 .. Name: ENSBTAP00000027172/1-520 Len: 520 Check: 6066 Weight: 1.00 Name: ENSP00000366927/1-517 Len: 520 Check: 6757 Weight: 1.00 Name: bmy_02838T0/1-516 Len: 520 Check: 4997 Weight: 1.00 Name: BACU017556/1-473 Len: 520 Check: 5169 Weight: 1.00 // 1 50 ENSBTAP00000027172/1-520 STQHAALPLP RLFALHHSAT QYFSAAALPS PIPNPDIPDN QLFISNKWHD ENSP00000366927/1-517 ---MLRFLAP RLLSLQGRTA RYSSAAALPS PILNPDIPYN QLFINNEWQD bmy_02838T0/1-516 ---MLRFLVP RLFCLHRLAT PYSSAAALPS PILNPDIRYN QLFINNEWQD BACU017556/1-473 ---MLRFLVP RLFCLHRLAA PYSSAAALPS PILNPDIRYN QLFINNEWQD 51 100 ENSBTAP00000027172/1-520 AVSKKTFPTV SPATGEVIGH VAEGDWADVD LAAKAARAAF RLGSPWRWMD ENSP00000366927/1-517 AVSKKTFPTV NPTTGEVIGH VAEGDRADVD RAVKAAREAF RLGSPWRRMD bmy_02838T0/1-516 AVSKKTFPTV NPATGEVIGH VAEGDRADVD QAVKAAREAF HLGSPWRRMD BACU017556/1-473 AVSKKTFPTV NPATGEVIGH VAEGDRADVD RA-------- ---------- 101 150 ENSBTAP00000027172/1-520 ALKRGWLLNH LADLVERDCV YLASLESLDN GKPFQESYVL DLDEVIKVYR ENSP00000366927/1-517 ASERGRLLNR LADLVERDRV YLASLETLDN GKPFQESYAL DLDEVIKVYR bmy_02838T0/1-516 ASERGRLLNR LADLVERDRV YLASLETLDN GKPFQESYVL DLDEVIKVYR BACU017556/1-473 ---------- ---------- ------TLDN GKPFQESYVL DLDEVIKVYR 151 200 ENSBTAP00000027172/1-520 YFAGWADKWH GKTIPMDGEH FCFTRHEPVG VCCQIIPWNF PLVMQSWKLA ENSP00000366927/1-517 YFAGWADKWH GKTIPMDGQH FCFTRHEPVG VCGQIIPWNF PLVMQGWKLA bmy_02838T0/1-516 YFAGWADKWH GKTIPMDGEH FCFTRHEPVG VCGQIIPWNF PLVMQGWKLA BACU017556/1-473 YFAGWADKWH GKTIPMDGEH FCFTRHEPVG VCGQIIPWNF PLVMQGWKLA 201 250 ENSBTAP00000027172/1-520 LALAMGNTVV TKVAEQTPFS ALYLASLIKE VGLPPGLVNI VTGYGPTAGA ENSP00000366927/1-517 PALATGNTVV MKVAEQTPLS ALYLASLIKE AGFPPGVVNI ITGYGPTAGA bmy_02838T0/1-516 PALATGNTVV MKVAEQTPLS ALYLASLVKE AGFPPGVVNI ITGYGPTAGA BACU017556/1-473 PALATGNTVV MKVAEQTPLS ALYLASLVKE AGFPPGVVNI ITGYGPTAGA 251 300 ENSBTAP00000027172/1-520 AIAHHMDIGK VAFTGSTKVG HLIQKAAGNS SLKRVTLELG GKSLSIVLAD ENSP00000366927/1-517 AIAQHVDVDK VAFTGSTEVG HLIQKAAGDS NLKRVTLELG GKSPSIVLAD bmy_02838T0/1-516 AIAHHMDIDK VAFTGSTEVG HLIQKAAGNS NLKRVTLELG GKSPSIVLAD BACU017556/1-473 AIAHHMDIDK VAFTGSTEVG HLIQKAAGDS NLKRVTLELG GKSPSIVLAD 301 350 ENSBTAP00000027172/1-520 ADMDHAVEQR QEALFFNMGQ CCCPGSWTFI EESIYDEFLE RTVEKAKQRR ENSP00000366927/1-517 ADMEHAVEQC HEALFFNMGQ CCCAGSRTFV EESIYNEFLE RTVEKAKQRK bmy_02838T0/1-516 ADMDHAVEQC HEALFFNMGQ CCCAGSRTFV EESIYDEFLE RTVEKAKQRK BACU017556/1-473 ADMDHAVQQC HEALFFNMGQ CCCAGSRTFV EESIYDEFLE RTVEKAKQRK 351 400 ENSBTAP00000027172/1-520 VGNPFDLDTQ QGPQVDRERF ERILGYIQLG QKEGAKLLCG GEHFRQQCFF ENSP00000366927/1-517 VGNPFELDTQ QGPQVDKEQF ERVLGYIQLG QKEGAKLLCG GERFGERGFF bmy_02838T0/1-516 VGNPFELDTQ QGPQVDKEQF ERILGYIQLG QKEGAKLLCG GERFGERGFF BACU017556/1-473 VGNPFELDTQ QGPQVDKEQF ERILGYIQLG QKERAKLLCG GERFGERGFF 401 450 ENSBTAP00000027172/1-520 IKPTVFGGVQ DDMRIAREEI FGPVQPLFKF KKIEEVIERA DNTRYGLAAA ENSP00000366927/1-517 IKPTVFGGVQ DDMRIAKEEI FGPVQPLFKF KKIEEVVERA NNTRYGLAAA bmy_02838T0/1-516 IKPTVFGGVQ DDMRIAKEEI FGPVQPLFKF RKMEEVIERA NNTRYGLAAA BACU017556/1-473 IKPTVFGGVQ DDMRIAKEEI FGPVQPLFKF RKMEEVIERA NNTRYGLAAA 451 500 ENSBTAP00000027172/1-520 VFTQDLDKAM YFTQALQTGT VWVNTYNVVT CHTPLGGFKE PGNGRELGED ENSP00000366927/1-517 VFTRDLDKAM YFTQALQAGT VWVNTYNIVT CHTPFGGFKE SGNGRELGED bmy_02838T0/1-516 VFTQDLDKAM YFTQALQAGT VWVNTYNIVT CHTPFGGFKE SGNGRELGED BACU017556/1-473 VFTQDLDKAM YFTQALQAGT VWVNTYNIVT CHTPFGGFKE SGNGRELGED 501 550 ENSBTAP00000027172/1-520 GLKAYTEVKT VTIKVPQKNS ENSP00000366927/1-517 GLKAYTEVKT VTIKVPQKNS bmy_02838T0/1-516 GLKAYTEVKT VTIKVP-KNS BACU017556/1-473 GLNAYTEVKT VTIKVPQKNS