KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:31:33 2014 Check: 00 .. Name: ENSTTRP00000010534/1-398 Len: 494 Check: 4083 Weight: 1.00 Name: BACU011258/1-428 Len: 494 Check: 1537 Weight: 1.00 Name: ENSP00000252997/1-397 Len: 494 Check: 1319 Weight: 1.00 Name: bmy_16431T0/1-409 Len: 494 Check: 799 Weight: 1.00 Name: ENSBTAP00000027184/1-403 Len: 494 Check: 7975 Weight: 1.00 // 1 50 ENSTTRP00000010534/1-398 MYQSLALAPS PSQVAYADSG AFLHSPGAGS PVFVPPARVP SMLPYLPACE BACU011258/1-428 ---------- ---------- --MKTPA-GT ELLLD----- ------TSSE ENSP00000252997/1-397 MYQSLALAAS PRQAAYADSG SFLHAPGAGS PMFVPPARVP SMLSYLSGCE bmy_16431T0/1-409 MYQSLALAPS PSQAAYADSG AFLHTPGAGS PVFVPPARVP SMLPYLPACE ENSBTAP00000027184/1-403 MYQSLALAPS PGQTAYADSG AFLHTPGAGS PVFVPPARVP SMLPYLPACE 51 100 ENSTTRP00000010534/1-398 PGPRAPAIAG HPGWAQAAAA DSSAFGSRSP HPPAAPPPGA TAFPFAHSTP BACU011258/1-428 SGNEEP--PK RRGKVMAGNQ GGRRKRPGTR GVALAPV--- -------SVP ENSP00000252997/1-397 PSPQPPELAA RPGWAQTATA DSSAFGPGSP HPPAAHPPGA TAFPFAHSPS bmy_16431T0/1-409 PAPQAPAIAG HPGWAQAAAA DSSAFSSGSS HPPAAPPPGA TAFPFAHSTP ENSBTAP00000027184/1-403 PGPQAPAITA HPGWAQAAAA DSSAFGSGSP HAPAAPPPGT TAFPFAHSSP 101 150 ENSTTRP00000010534/1-398 GPGGGGGAGA ----RDGGAF QGAMLAREQY PAPLGRPVGS SYPTAYPAYV BACU011258/1-428 GPTYEKGLQG ----RPISGN EKQSLPQAQQ PGSL------ ---------- ENSP00000252997/1-397 GPGSGGSAGG ----RDGSAY QGALLPREQF AAPLGRPVGT SYSATYPAYV bmy_16431T0/1-409 GPGGGGGGGG GAGARDGGAF QGAMLAREQY PAALGRPVGS SYPTAYPAYV ENSBTAP00000027184/1-403 GP--GGGTGT ----RDNGAF QGAMLAREQY PAALGRPVSS SYPTAYPAYM 151 200 ENSTTRP00000010534/1-398 STEVAPSWTS GPLDGSVLH- ------GLPG HRATFAADLL EEFPGEGREC BACU011258/1-428 CTEVAPSWTS GPLDGSVLHS LQACPTGLPG HRVTFAADLL EEFPGEGREC ENSP00000252997/1-397 SPDVAQSWTA GPFDGSVLH- ------GLPG RRPTFVSDFL EEFPGEGREC bmy_16431T0/1-409 STEVAPSWTS GPLDGSVLHS LQGRPAGLPG HRVTFAADLL EEFPGEGREC ENSBTAP00000027184/1-403 SAEVAPSWTS GPLDGSVLHS LQGLPAGLPG RRAPFAAELL EEFPGEGREC 201 250 ENSTTRP00000010534/1-398 VNCGALSTPL WRRDGTGHYL CNACGLYHKM NGVYKPLTRP QKRL------ BACU011258/1-428 VNCGALSTPL WRRDGTGHYL CNACGLYHKM NGVNRPLTRP QKRLAAARRI ENSP00000252997/1-397 VNCGALSTPL WRRDGTGHYL CNACGLYHKM NGVNRPLVRP QKRL------ bmy_16431T0/1-409 VNCGALSTPL WRRDGTGHYL CNACGLYHKM NGVNRPLTRP QKRL------ ENSBTAP00000027184/1-403 VNCGALSTPL WRRDGTGHYL CNACGLYHKM NGVNRPLVRP QKRL------ 251 300 ENSTTRP00000010534/1-398 ---------- ---------- ---------- ---------- ---------- BACU011258/1-428 QGLPPFLLGR SIRRRVQSTW TAVAGVGGLA SATWPGEARF VVEDVGYFAL ENSP00000252997/1-397 ---------- ---------- ---------- ---------- ---------- bmy_16431T0/1-409 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000027184/1-403 ---------- ---------- ---------- ---------- ---------- 301 350 ENSTTRP00000010534/1-398 ---------- ---------- ---------X XXXXXXXXXX XXXXXXXXXX BACU011258/1-428 GGPQGAPAPL SRAAGPQPPA LLSPASCPQS SSRRAGLCCT NCHTTNTTLW ENSP00000252997/1-397 ---------- ---------- ---------S SSRRAGLCCT NCHTTNTTLW bmy_16431T0/1-409 ---------- ---------- ---------S SSRRAGLCCT NCHTTTTTLW ENSBTAP00000027184/1-403 ---------- ---------- ---------S SSRRAGLCCT NCHTTTTTLW 351 400 ENSTTRP00000010534/1-398 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX BACU011258/1-428 RRNMDGEPVC NACGLYMKLH GVPRPLAMKK ESIQTRKRKP KNISKAKGSS ENSP00000252997/1-397 RRNSEGEPVC NACGLYMKLH GVPRPLAMKK ESIQTRKRKP KTIAKARGSS bmy_16431T0/1-409 RRNVDGEPVC NACGLYMKLH GVPRPLAMKK ESIQTRKRKP KNISKAKGSS ENSBTAP00000027184/1-403 RRNVDGEPVC NACGLYMKLH GVPRPLAMKK ESIQTRKRKP KNIAKTKGSS 401 450 ENSTTRP00000010534/1-398 XSTGSTTASP QASVPDLEMS AATLKPEPSL ASPSCPGPSV TSQASTQVDD BACU011258/1-428 GSAGNTTASP PASVPDLEIS AATLKPEPSL ESPSCPGPSV TSQASTQVDD ENSP00000252997/1-397 GSTRNASASP SA-VASTDSS AATSKAKPSL ASPVCPGPSM APQASGQEDD bmy_16431T0/1-409 GSTGNTTASP PASVPDLEIS AATLKPEPRL ASPSCPGPSV TSQASTQVGD ENSBTAP00000027184/1-403 GSSGHTTASP QASVPDPEVS AATLKPEPSL ASPSCPGPSV TSQGSAQVDD 451 500 ENSTTRP00000010534/1-398 TLAPSHLEFK FEPEDFALPS AALGPQAGLG GTLRQEAWCA LALA BACU011258/1-428 TLAPSHLEFK FEPEDFALPS AALGPQAGLG GTLRQEAWCA LALA ENSP00000252997/1-397 SLAPGHLEFK FEPEDFAFPS TAPSPQAGLR GALRQEAWCA LALA bmy_16431T0/1-409 TLAPSHLEFK FEPEDFALPS AALGPQAGLS GTLRQEAWCA LALA ENSBTAP00000027184/1-403 PLAPSHLEFK FEPEDFALPS AALGQQAGLG GALRQEAWCA LALA