KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:31:37 2014 Check: 00 .. Name: bmy_19704T0/1-533 Len: 798 Check: 7949 Weight: 1.00 Name: ENSTTRP00000005632/1-758 Len: 798 Check: 5299 Weight: 1.00 Name: BACU013232/1-625 Len: 798 Check: 5500 Weight: 1.00 Name: ENSP00000429064/1-755 Len: 798 Check: 624 Weight: 1.00 Name: ENSBTAP00000027195/1-758 Len: 798 Check: 6734 Weight: 1.00 // 1 50 bmy_19704T0/1-533 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000005632/1-758 MEAVIEKECS ALGGLFQTII SDMKGSYPVW EDFINKAGKL QSQLRTTVVA BACU013232/1-625 ---------- ---------- ---------- ---------- ---------- ENSP00000429064/1-755 MEAVIEKECS ALGGLFQTII SDMKGSYPVW EDFINKAGKL QSQLRTTVVA ENSBTAP00000027195/1-758 MEAVIEKECS ALGGLFQTII SDMKGSYPVW EDFINKAGKL QSQLRTTVVA 51 100 bmy_19704T0/1-533 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000005632/1-758 AAAFLDAFQK VADMATNTRG GTREIGSALT RMCMRHRSIE AKLRQFSSAL BACU013232/1-625 ---------- ---------- ---------- ---------- ---------- ENSP00000429064/1-755 AAAFLDAFQK VADMATNTRG GTREIGSALT RMCMRHRSIE AKLRQFSSAL ENSBTAP00000027195/1-758 AAAFLDAFQK VADMATNTRG GTREIGSALT RMCMRHRSIE AKLRQFSSAL 101 150 bmy_19704T0/1-533 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000005632/1-758 IDCLINPLQE QMEEWKKVAN QLDKDHAKEY KKARQEIKKK SSDTLKLQKK BACU013232/1-625 ---------- -MEEWKKVAN QLDKDHAKEY KKARQEIKKK SSDTLKLQKK ENSP00000429064/1-755 IDCLINPLQE QMEEWKKVAN QLDKDHAKEY KKARQEIKKK SSDTLKLQKK ENSBTAP00000027195/1-758 IDCLINPLQE QMEEWKKVAN QLDKDHAKEY KKARQEIKKK SSDTLKLQKK 151 200 bmy_19704T0/1-533 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000005632/1-758 AKKGRGDIQP QLDSALQDVN DKYLLLEETE KQAVRKALIE ERGRFCTFIS BACU013232/1-625 AKKGRGDIQP QLDSALQDVN DKYLLLEETE KQAVRKALIE ERGRFCTFIS ENSP00000429064/1-755 AKKGRGDIQP QLDSALQDVN DKYLLLEETE KQAVRKALIE ERGRFCTFIS ENSBTAP00000027195/1-758 AKKGRGDIQP QLDSALQDVN DKYLLLEETE KQAVRKALIE ERGRFCTFIS 201 250 bmy_19704T0/1-533 MLRPVIEEEI SMLGEITHLQ TISEDLKSLT MDPHKLPSSS EQVILDLKGS ENSTTRP00000005632/1-758 MLRPVIEEEI SMLGEITHLQ TISEDLKSLT MDPHKLPSSS EQVILDLKGS BACU013232/1-625 MLRPVIEEEI SMLGEITHLQ TISEDLKSLT MDPHKLPSSS EQVILDLKGS ENSP00000429064/1-755 MLRPVIEEEI SMLGEITHLQ TISEDLKSLT MDPHKLPSSS EQVILDLKGS ENSBTAP00000027195/1-758 MLRPVIEEEI SMLGEITHLQ TISEDLKSLT MDPHKLPSSS EQVILDLKGS 251 300 bmy_19704T0/1-533 DYSWSYQTPP SSPSTTMSRK SSVCSSLNSV NSSDSRSSGS HGSHSHSPSS ENSTTRP00000005632/1-758 DYSWSYQTPP SSPSTTMSRK SSVCSSLNSV NSSDSRSSGS HGSHSHSPSS BACU013232/1-625 DYSWSYQTPP SSPSTTMSRK SSVCSSLNSV NSSDSRSSGS HGSHSHSPSS ENSP00000429064/1-755 DYSWSYQTPP SSPSTTMSRK SSVCSSLNSV NSSDSRSS-- -GSHSHSPSS ENSBTAP00000027195/1-758 DYSWSYQTPP SSPSTTMSRK SSVCSSLNSV NSSDSRSSGS HGSHSHSPSS 301 350 bmy_19704T0/1-533 HYRYRGSSLA QQAPVRLSSV SSHDSGFISQ DAFQSKSPSP MPPEAPNQNS ENSTTRP00000005632/1-758 HYRYRGSSLA QQAPVRLSSV SSHDSGFISQ DAFQSKSPSP MPPEAPNQ-- BACU013232/1-625 HYRYRGSSLA QQAPVRLSSV SSHDSGFISQ DAFQSKSPSP MPPEAPNQNS ENSP00000429064/1-755 HYRYRSSNLA QQAPVRLSSV SSHDSGFISQ DAFQSKSPSP MPPEAPNQ-- ENSBTAP00000027195/1-758 HYRYRGSSLA QQAPVRLSSV SSHDSGFISQ DAFQSKSPSP MPPEAPNQ-- 351 400 bmy_19704T0/1-533 SSSASSEASE TCQS------ ---------- --------VS ECSSPTSVSS ENSTTRP00000005632/1-758 ---------- ---------- ---------- --------LS NGFSHYSLSS BACU013232/1-625 SSSASSEASE TCQSVSECSS PTSVSSGSTM GAWASTEKLS NGFSHYSLSS ENSP00000429064/1-755 ---------- ---------- ---------- --------LS NGFSHYSLSS ENSBTAP00000027195/1-758 ---------- ---------- ---------- --------LS NGFSHYSLSS 401 450 bmy_19704T0/1-533 GSTMG----- ---------- ---------- ---------- ------AWAS ENSTTRP00000005632/1-758 EPHVGPVGAS LFPHCLPASR LLPRATSVHL PDYAHYYTIG PGMFPXXXXX BACU013232/1-625 ESHVGPVGAS LFPHCLPASR LLPRVTSAHL PDYAHYYTIG PGMFPSSQIP ENSP00000429064/1-755 ESHVGPTGAG LFPHCLPASR LLPRVTSVHL PDYAHYYTIG PGMFPSSQIP ENSBTAP00000027195/1-758 ESHVGPVGAS LFPHCLPASR LLPRVTSVHL PDYAHYYTIG PGMFPSSQIP 451 500 bmy_19704T0/1-533 TEKDWAKPGP YDQPLVNTLQ RRKDKREPDP SGGGPVAAGG APTAAEEAQR ENSTTRP00000005632/1-758 XXXDWAKPGP YDQPLVNTLQ RRKDKREPDP SGGGPVAAGG TPTAAEEAQR BACU013232/1-625 SWKDWAKPGP YDQPLVNTLQ RRKDKREPDP SGGGPVAAGG APAAPQEAQR ENSP00000429064/1-755 SWKDWAKPGP YDQPLVNTLQ RRKEKREPDP NGGGPTTASG PPAAAEEAQR ENSBTAP00000027195/1-758 SWKDWAKPGP YDQPLVNTLQ RRKEKREPDP SGGGPAAAGG APAATEEAQR 501 550 bmy_19704T0/1-533 PRSMTVSAAT RPGEEMEACE ELALALSRGL QLDTQRSSRD SLQCSSGYST ENSTTRP00000005632/1-758 PRSMTVSAAA RPGEEMEACE ELALALSRGL QLDTQRSSRD SLQCSSGYST BACU013232/1-625 PRSMTVSAAT RPGEEMEACE ELALALSRGL QLDTQRSSRD SLQCSSGYST ENSP00000429064/1-755 PRSMTVSAAT RPGEEMEACE ELALALSRGL QLDTQRSSRD SLQCSSGYST ENSBTAP00000027195/1-758 PRSMTVSAAT RPGEEMEACE ELALALSRGL QLDTQRSSRD SLQCSSGYST 551 600 bmy_19704T0/1-533 QTTTPCCSED TIPSQVSDYD YFSVSGDQEA DQQEFDKSST IPRNSDISQS ENSTTRP00000005632/1-758 QTTTPCCSED TIPSQVSDYD YFSVSGDQEA DQQEFDKSST IPRNSDISQS BACU013232/1-625 QTTTPCCSED TIPSQ----- ---------- ---------- ---------- ENSP00000429064/1-755 QTTTPCCSED TIPSQVSDYD YFSVSGDQEA DQQEFDKSST IPRNSDISQS ENSBTAP00000027195/1-758 QTTTPCCSED TIPSQVSDYD YFSVSGDQEA DQQEFDKSST IPRNSDISQS 601 650 bmy_19704T0/1-533 YRRMFQAKRP ASTAGLPTTL GPTVVTPGVA TIRRTPSTKP SVRRGTIGAG ENSTTRP00000005632/1-758 YRRMFQAKRP ASTAGLPTTL GPAMVTPGVA TIRRTPSTKP SVRRGTIGAG BACU013232/1-625 ---------- ---------- -------GVA TIRRTPSTKP SVRRGTIGAG ENSP00000429064/1-755 YRRMFQAKRP ASTAGLPTTL GPAMVTPGVA TIRRTPSTKP SVRRGTIGAG ENSBTAP00000027195/1-758 YRRMFQAKRP ASTAGLPTTL GPAMVTPGVA TIRRTPSTKP SVRRGTIGAG 651 700 bmy_19704T0/1-533 PIPIKTPVIP VKTPTVPDLP GVLPAPPDGP EERGEHSPES PSVGEGPQGG ENSTTRP00000005632/1-758 PIPIKTPVIP VKTPTVPDLP GVLSAPPDGP EERGEHSPES PSVGEGPQGG BACU013232/1-625 PIPIKTPVIP VKTPTVPDLP GVLPAPPDGP EERGEHSPES PSVGEGPQGG ENSP00000429064/1-755 PIPIKTPVIP VKTPTVPDLP GVLPAPPDGP EERGEHSPES PSVGEGPQGV ENSBTAP00000027195/1-758 PIPIKTPVIP VKTPTVPDLP GVLPAPPDGP EERGEHSPES PSVAESPQGV 701 750 bmy_19704T0/1-533 TSMPSSMWSG QASVNPPLPG PKPSIPEEHR QAIPESEAED QERDPPSASA ENSTTRP00000005632/1-758 TSMPSSMWSG QASVNPPLPG PKPSIPEEHR QAIPESEAED QERDPPSATA BACU013232/1-625 TSMPSSMWSG QASVNPPLPG PKPSIPEEHR QAIPESEAED QERDPPSASA ENSP00000429064/1-755 TSMPSSMWSG QASVNPPLPG PKPSIPEEHR QAIPESEAED QEREPPSATV ENSBTAP00000027195/1-758 TSVPTSMWSG QASVNPPLPG PKPSIPEEHR QAIPESEAED QERDPPSATA 751 800 bmy_19704T0/1-533 SPGQIPESDP ADLSPRDAPQ GEDMLNAIRR GVKLKKTTTN DRSAPRFT ENSTTRP00000005632/1-758 SPGQIPESDP ADLSPRDAPQ GEDMLNAIRR GVKLKKTTTN DRSAPRFS BACU013232/1-625 SPGQIPESDP ADLSPRDAPQ GEDMLNAIRR GVKLKKTTTN DRSAPRFT ENSP00000429064/1-755 SPGQIPESDP ADLSPRDTPQ GEDMLNAIRR GVKLKKTTTN DRSAPRFS ENSBTAP00000027195/1-758 SPGQVPESDP ADVSPRDVPQ GEDMLNAIRR GVKLKKTTTN DRSAPRFS