KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:31:37 2014 Check: 00 .. Name: ENSP00000291672/1-340 Len: 343 Check: 6158 Weight: 1.00 Name: ENSBTAP00000027197/1-341 Len: 343 Check: 5340 Weight: 1.00 Name: bmy_18691T0/1-316 Len: 343 Check: 2649 Weight: 1.00 Name: ENSTTRP00000003486/1-275 Len: 343 Check: 6287 Weight: 1.00 // 1 50 ENSP00000291672/1-340 MAEGGELMSR LLSENADLKK QVRLLKENQM LRRLLSQSCQ EG---GGHDL ENSBTAP00000027197/1-341 MAEGSELMNR LMSENADLKK QVRLMKENQM LKRLLSESCQ ESCGRGGRDF bmy_18691T0/1-316 MLVPEPLESR SL-------- -------RCC LDSLSWVECQ NF-----QDL ENSTTRP00000003486/1-275 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000291672/1-340 LPPRAHAYPE AGSPGSGVPD FGRFTSVADT PSQLQTSSLE DLLCSHAPLS ENSBTAP00000027197/1-341 LFPKAPAYPE ACSP--GSTD FGRFTSGPDA PSQLQGSSLE DLLCSHAPLS bmy_18691T0/1-316 WPWQPPPYP- ------PVPD FGRFSSGPDA PSQLQASSLE DLLCSHAPLS ENSTTRP00000003486/1-275 ---------- --------PD FGRFNGGPDA PSQLQASSLE DLLCSHAPLS 101 150 ENSP00000291672/1-340 SEDDTSPGCA APSQAPFKAF LSPPEPHSHR GTDRKLSPLL SPLQDSLVDK ENSBTAP00000027197/1-341 SEDDASPGCV TSSQVPFKAF LSSPELRIPR GSDRKLSPLL SPLQDPLVEK bmy_18691T0/1-316 SEDDASPGCA TSSQVPFKAF LSSPELSAPH SSDWKLSPLL SPLQDPLADK ENSTTRP00000003486/1-275 SEDDASPGCA TSSQVPFKNF LSSPELSVPR GSDRKLSPLL SSLQDPLADK 151 200 ENSP00000291672/1-340 TLLEPREMVR PKKVCFSESS LPTGDRTRRS YYLNEIQSFA GAEKDARVVG ENSBTAP00000027197/1-341 TLLETRDVGR PKKVCFSESS LPSGDRTRRS YYLNEIQSFT GTEKDGRIVG bmy_18691T0/1-316 TLQESREVGR PKKVCFLESS LPSGDRTRRS YYLNEIQSFA GTEKDGRIVG ENSTTRP00000003486/1-275 SLLEPREVGR PKKVCFLESS LPSGDRTRKS FYLNEIQSFA GTEKDGRIVG 201 250 ENSP00000291672/1-340 EIAFQLDRRI LAYVFPGVTR LYGFTVANIP EKIEQTSTKS LDGSVDERKL ENSBTAP00000027197/1-341 EIAFQLDRRI LAYVFPGVTR LYGFTVSNIP EKIKQTSIKS LDGSVDEKKL bmy_18691T0/1-316 EIAFQLDRRI LAYVFPGVTR LYGFTVSNIP EKIKQTSIKP LDGSVDEKRR ENSTTRP00000003486/1-275 EIAFQLDWRI LAYVFPGVTR LYGFTVSNIP EKIKQTSIKS LDGSVDEKKR 251 300 ENSP00000291672/1-340 RELTQRYLAL SARLEKLGYS RDVHPAFSEF LINTYGILKQ RPDLRANPLH ENSBTAP00000027197/1-341 RELTHRYLTL TARLERLGYN RDVHPVFSEF LINTYGILKQ RPDLRANPLH bmy_18691T0/1-316 RELTHRFLTL TARLERLGYS RHVHPAFSEF LINTYGILKQ RPDLRANPLH ENSTTRP00000003486/1-275 LELTHRYLTL TACLERLGYK RAVHPVFSEF LINTYGILKQ RPDLRANPLH 301 350 ENSP00000291672/1-340 SSPAALRKLV IDVVPPKFLG DSLLLLNCLC ELSKEDGKPL FAW ENSBTAP00000027197/1-341 SSPAALRKLV IDVVPPKFLG DSLLLLNCLC ELSKEDSRPL FAW bmy_18691T0/1-316 SSPAALRKLV IDVVPPKFLG DSLLLLNCLC ELSKEDSRPL FAW ENSTTRP00000003486/1-275 SSPAALCKLV IDVVPPKFLG DSLLLLNCLC ELSKEDGRPL FAW