KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:31:41 2014 Check: 00 .. Name: BACU001047/1-742 Len: 745 Check: 9710 Weight: 1.00 Name: ENSP00000442973/1-454 Len: 745 Check: 5005 Weight: 1.00 Name: ENSBTAP00000027209/1-454 Len: 745 Check: 6600 Weight: 1.00 Name: ENSTTRP00000006405/1-454 Len: 745 Check: 7411 Weight: 1.00 Name: bmy_15843T0/1-434 Len: 745 Check: 4592 Weight: 1.00 // 1 50 BACU001047/1-742 MSKSESPKEP EQLRKLFLRG LSFETTDESL RSHSEQWGTL TDCVVTRDPN ENSP00000442973/1-454 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000027209/1-454 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000006405/1-454 ---------- ---------- ---------- ---------- ---------- bmy_15843T0/1-434 ---------- ---------- ---------- ---------- ---------- 51 100 BACU001047/1-742 TKRSRGFGVV TYATVEEVDA AMKAGPHKAD GRVVEPKRAV SREDSQRPGA ENSP00000442973/1-454 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000027209/1-454 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000006405/1-454 ---------- ---------- ---------- ---------- ---------- bmy_15843T0/1-434 ---------- ---------- ---------- ---------- ---------- 101 150 BACU001047/1-742 HLTVKKIFVG GIKGDTEEHH LRDYFEQYGK IEVIEIMTDR GSGKKRGFAF ENSP00000442973/1-454 ---------- ---------- ---------- ---------- ---------M ENSBTAP00000027209/1-454 ---------- ---------- ---------- ---------- ---------M ENSTTRP00000006405/1-454 ---------- ---------- ---------- ---------- ---------M bmy_15843T0/1-434 ---------- ---------- ---------- ---------- ---------- 151 200 BACU001047/1-742 VTFDDHDSVD KIVIPKYHTV NGHNCEVRKA LSQQEMASAS SNQRGRSGSG ENSP00000442973/1-454 STFRQEDV-- ---------- ---------- ---------- ---------- ENSBTAP00000027209/1-454 STFRQEDV-- ---------- ---------- ---------- ---------- ENSTTRP00000006405/1-454 STFRQEDV-- ---------- ---------- ---------- ---------- bmy_15843T0/1-434 ---------- ---------- ---------- ---------- ---------- 201 250 BACU001047/1-742 NFGGGHGGGF GGSDSFGHGG DFSGRGGFGG SHGGGGYGGS GDGYNGFVDQ ENSP00000442973/1-454 ---------- --EDHYEMGE EL-------- ---------- ---------- ENSBTAP00000027209/1-454 ---------- --EDHYEMGE EL-------- ---------- ---------- ENSTTRP00000006405/1-454 ---------- --EDHYEMGE EL-------- ---------- ---------- bmy_15843T0/1-434 ---------- ---------- ---------- ---------- ---------- 251 300 BACU001047/1-742 LVHWDGLGQF AIVKKCREKS TGLEYAAKFI KKRQRQASRR GVCREEIERE ENSP00000442973/1-454 -----GSGQF AIVRKCRQKG TGKEYAAKFI KKRRLSSSRR GVSREEIERE ENSBTAP00000027209/1-454 -----GSGQF AIVRKCRQKG TGKEYAAKFI KKRRLSSSRR GVSREEIERE ENSTTRP00000006405/1-454 -----GSGQF AIVRKCRQKG TGKEYAAKFI KKRRLSSSRR GVSREEIERE bmy_15843T0/1-434 ------SGQF AIVRKCRQKG TGKEYAAKFI KKRRLSSSRR GVSREEIERE 301 350 BACU001047/1-742 VSILRQVLHP NVITLHDVFE NRTDVVLILE LVSGGELFDF LAQKESLSEE ENSP00000442973/1-454 VNILREIRHP NIITLHDIFE NKTDVVLILE LVSGGELFDF LAEKESLTED ENSBTAP00000027209/1-454 VNILREIRHP NIITLHDIFE NRTDVVLILE LVSGGELFDF LAEKESLTED ENSTTRP00000006405/1-454 VNILREIRHP NIITLHDIFE NKTDVVLILE LVSGGELFDF LAEKESLTED bmy_15843T0/1-434 VNILREIRHP NIITLHDIFE NKTDVVLILE LVSGGELFDF LAEKESLTED 351 400 BACU001047/1-742 EATSFIKQIL EGVNYLHAKK IAHFDLKVGK ISPPGGYALG PGLGSGSVYG ENSP00000442973/1-454 EATQFLKQIL DGVHYLHSKR IAHFDLK--- ---------- ---------- ENSBTAP00000027209/1-454 EATQFLKQIL DGVHYLHSKR IAHFDLK--- ---------- ---------- ENSTTRP00000006405/1-454 EATQFLKQIL DGVHYLHSKR IAHFDLK--- ---------- ---------- bmy_15843T0/1-434 EATQFLKQIL DGVHYLHSKR IAHFDLK--- ---------- ---------- 401 450 BACU001047/1-742 NVIPSSSRAL EPENIMLLDK NIPIPHIKLI DFGLAHEIED GVEFKNIFGT ENSP00000442973/1-454 ---------- -PENIMLLDK NVPNPRIKLI DFGIAHKIEA GNEFKNIFGT ENSBTAP00000027209/1-454 ---------- -PENIMLLDK NVPNPRIKLI DFGIAHKIEA GNEFKNIFGT ENSTTRP00000006405/1-454 ---------- -PENIMLLDK NVPNPRIKLI DFGIAHKIEA GNEFKNIFGT bmy_15843T0/1-434 ---------- -PENIMLLDK NVPNPRIKLI DFGIAHKIEA GNEFKNIFGT 451 500 BACU001047/1-742 PEFVAPEIVN YEPLGLEADM WSIGVITYIL LSGASPFLGD TKQDTLANIT ENSP00000442973/1-454 PEFVAPEIVN YEPLGLEADM WSIGVITYIL LSGASPFLGE TKQETLTNIS ENSBTAP00000027209/1-454 PEFVAPEIVN YEPLGLEADM WSIGVITYIL LSGASPFLGE TKQETLTNIS ENSTTRP00000006405/1-454 PEFVAPEIVN YEPLGLEADM WSIDVITYIF LSGASPFLGE TKQETLTNIS bmy_15843T0/1-434 PEFVAPEIVN YEPLGLEADM WSIGVITYIL LSGASPFLGE TKQETLTNIS 501 550 BACU001047/1-742 AVSYNFDEEF FSQTSELAKD FIRKLLVKET RKRLTIQEAL RHPWITS--- ENSP00000442973/1-454 AVNYDFDEEY FSNTSELAKD FIRRLLVKDP KRRMTIAQSL EHSWIKAIRR ENSBTAP00000027209/1-454 AVNYDFDEEY FSNTSELAKD FIRRLLVKDP KRRMTIAQSL EHSWIKAIRR ENSTTRP00000006405/1-454 AVNYDFDEEY FSNTSELAKD FIRRLLVKDP KRRMTIAQSL EHSWIKAIRR bmy_15843T0/1-434 AVNYDFDEEY FSNTSELAKD FIRRLLVKDP KRRMTIAQSL EHSWIKAIRR 551 600 BACU001047/1-742 KGVIRTPEQR KAEPAQLKTE RLREYTLKCH SSMPPDNTYV NFERFACVVE ENSP00000442973/1-454 RNVRGEDSGR KPERRRLKTT RLKEYTIKSH SSLPPNNSYA DFERFSKVLE ENSBTAP00000027209/1-454 RNVRREDSGR KPERRRLKTA RLKEYTIKSH SSMPPNNTYI NFERFSKVLE ENSTTRP00000006405/1-454 RNVRREDSGR KPERRRLKTA RLKEYTIKSH SSMPPNNTYV NFERFSKVLE bmy_15843T0/1-434 RNVRREDSGR KPERRRLKTA RLKEYTIKSH SSMPPNNTYV NFERFSKVLE 601 650 BACU001047/1-742 DVARMDQGCR ALAGARDTIQ DDVETLVSIY NEKEAWYQEE SERAQHDLSQ ENSP00000442973/1-454 EAAAAEEGLR ELQRSRRLCH EDVEALAAIY EEKEAWYREE SDSLGQDLRR ENSBTAP00000027209/1-454 EVAAAEEGLR GLEHSRRLFH EDLEALTAIY EEKEAWYREE NESLGQDLRR ENSTTRP00000006405/1-454 EVAVAEEGLR GLEHSRRLFH EDIEALTAIY EEKEAWYREE NESIGQDLRR bmy_15843T0/1-434 EVAAAEEGLR GLEHSRRLFH EDIEALTAIY EEKEAWYREE NESIGQDLRR 651 700 BACU001047/1-742 LRYEFRKVQS SKKLLREDIR ATGSRLRSTA RKLDHLQAQF EALGQELLAD ENSP00000442973/1-454 LRQELLKTEA LKRQAQEEAK GALLGTSGLK RRFSRLENRY EALAKQVASE ENSBTAP00000027209/1-454 LRQELHKTEA LQRQAQEEAK GALLGASGLK RRFSRLENRY EALAKQVASE ENSTTRP00000006405/1-454 LRQELHKTEA LQRQAQEEAK GALLGASGLR RRFSRLENRY EALAKQVASE bmy_15843T0/1-434 LRQELHKTEA LQRQAQEEAK GALLGASGLR RRFSRLENRY EALAKQVASE 701 750 BACU001047/1-742 LQWLQELVGG FQLESGSVDS PSSVCCQDSS ECLGELLNRS CSEEV ENSP00000442973/1-454 MRFVQDLVRA LEQE------ ---------- ----KLQGVE CGLR- ENSBTAP00000027209/1-454 MRFVQDLVRA MEQE------ ---------- ----KLQEGE CSLR- ENSTTRP00000006405/1-454 MLFVQDLVRA MEQE------ ---------- ----KLQGGE CSLR- bmy_15843T0/1-434 MLFVQDLVHA MEQE------ ---------- ----KLQGGE CSLR-