KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:31:42 2014 Check: 00 .. Name: bmy_19924T0/1-974 Len: 1111 Check: 9910 Weight: 1.00 Name: BACU008607/1-1110 Len: 1111 Check: 4014 Weight: 1.00 Name: ENSTTRP00000015229/1-1046 Len: 1111 Check: 2183 Weight: 1.00 Name: ENSP00000216297/1-1047 Len: 1111 Check: 217 Weight: 1.00 Name: ENSBTAP00000027214/1-1047 Len: 1111 Check: 1048 Weight: 1.00 // 1 50 bmy_19924T0/1-974 ---------- --VKENEXIT YSTFQKGEDE YANVDAIVVS VGVDEEI--- BACU008607/1-1110 -MVHLEKGAQ KSVKENEQIT YSTFQKGEDE YANVDAIVVS VGVDEEIVYA ENSTTRP00000015229/1-1046 MAVTLDKDA- --YYRRVKRL YSNWRKGEDE YANVDAIVVS VGVDEEIVYA ENSP00000216297/1-1047 MAVTLDKDA- --YYRRVKRL YSNWRKGEDE YANVDAIVVS VGVDEEIVYA ENSBTAP00000027214/1-1047 MAVTLDKDA- --YYRRVKRL YSNWRKGEDE YANVDAIVVS VGVDEEIVYA 51 100 bmy_19924T0/1-974 ---------- ---------- ---------- --KKVEFLKQ IANTKGNENA BACU008607/1-1110 KSTALQTWLF GYELTDTIMV FCDDKIIFMA SKKKVEFLKQ IANTKGNENA ENSTTRP00000015229/1-1046 KSTALQTWLF GYELTDTIMV FCDDKIIFMA SKKKVEFLKQ IANTKGNENA ENSP00000216297/1-1047 KSTALQTWLF GYELTDTIMV FCDDKIIFMA SKKKVEFLKQ IANTKGNENA ENSBTAP00000027214/1-1047 KSTALQTWLF GYELTDTIMV FCDDKIIFMA SKKKVEFLKQ IANTKGNENA 101 150 bmy_19924T0/1-974 NGAPAITLLI REKNESNKSS FDKMIEAIKE SKNGKKIGVF SKDKFPGEFM BACU008607/1-1110 NGAPAITLLI REKNESNKSS FDKMIEAIKE SKNGKKIGVF SKDKFPGEFM ENSTTRP00000015229/1-1046 NGAPAITLLI REKNESNKSS FDKMIEAIKE SKNGKKIGVF SKDKFPGEFM ENSP00000216297/1-1047 NGAPAITLLI REKNESNKSS FDKMIEAIKE SKNGKKIGVF SKDKFPGEFM ENSBTAP00000027214/1-1047 NGAPAITLLV REKNESNKSS FDKMIEAIKE SKNGKKIGVF SKDKFPGEFM 151 200 bmy_19924T0/1-974 KSWNDCLNKE GFDKIDISAV VAYTIAVKED GELNLMKKAA SITSEVFNKF BACU008607/1-1110 KSWNDCLNKE GFDKIDISAV VAYTIAVKED GELNLMKKAA SITSEVFNKF ENSTTRP00000015229/1-1046 KSWNDCLNKE GFDKIDISAV VAYTIAVKED GELNLMKKAA SITSEVFNKF ENSP00000216297/1-1047 KSWNDCLNKE GFDKIDISAV VAYTIAVKED GELNLMKKAA SITSEVFNKF ENSBTAP00000027214/1-1047 KSWNDCLNKE GFDKIDISAV VAYTIAVKED GELNLMKKAA SITSEVFNKF 201 250 bmy_19924T0/1-974 FKERVMEIVD ADEKVRHSKL AESVEKAIEE KKYLAGADPS TVEMCYPPII BACU008607/1-1110 FKERVMEIVD ADEKVRHSKL AESVEKAIEE KKYLAGADPS TVEMCYPPII ENSTTRP00000015229/1-1046 FKERVMEIVD ADEKVRHSKL AESVEKAIEE KKYLAGADPS TVEMCYPPII ENSP00000216297/1-1047 FKERVMEIVD ADEKVRHSKL AESVEKAIEE KKYLAGADPS TVEMCYPPII ENSBTAP00000027214/1-1047 FKERVMEIVD ADEKVRHSKL AESVEKAIEE KKYLAGADPS TVEMCYPPII 251 300 bmy_19924T0/1-974 QSGGNYNLKF SVVSDKNHMH FGAITCAMGI RFKSYCSNLV RTLMVDPSQE BACU008607/1-1110 QSGGNYNLKF SVVSDKNHMH FGAITCAMGI RFKSYCSNLV RTLMVDPSQE ENSTTRP00000015229/1-1046 QSGGNYNLKF SVVSDKNHMH FGAITCAMGI RFKSYCSNLV RTLMVDPSHE ENSP00000216297/1-1047 QSGGNYNLKF SVVSDKNHMH FGAITCAMGI RFKSYCSNLV RTLMVDPSQE ENSBTAP00000027214/1-1047 QSGGNYNLKF SVVSDKNHMH FGAITCAMGI RFKSYCSNLV RTLMVDPSQE 301 350 bmy_19924T0/1-974 VQENYNFLLQ LQEELLKELR HGVKICDVYN AVMDVVKKQK PELLNKITKN BACU008607/1-1110 VQENYNFLLQ LQEELLKELR HGVKICDVYN AVMDVVKKQK PELLNKITKN ENSTTRP00000015229/1-1046 VQENYNFLLQ LQEELLKELR HGVKICDVYN AVMDVVKKQK PELLNRITKN ENSP00000216297/1-1047 VQENYNFLLQ LQEELLKELR HGVKICDVYN AVMDVVKKQK PELLNKITKN ENSBTAP00000027214/1-1047 VQENYNFLLQ LQEELLKELR HGVKICDVYN AVMDVVKKQK PELLNKITKN 351 400 bmy_19924T0/1-974 LGFGMGIEFR EGSLVINSKN QYKLKKGMVF SINLGFSDLT NKEGKKPEEK BACU008607/1-1110 LGFGMGIEFR EGSLVINSKN QYKLKKGMVF SINLGFSDLT NKEGKKPEEK ENSTTRP00000015229/1-1046 LGFGMGIEFR EGSLVINSKN QYKLKKGMVF SINLGFSDLT NKEGKKPEEK ENSP00000216297/1-1047 LGFGMGIEFR EGSLVINSKN QYKLKKGMVF SINLGFSDLT NKEGKKPEEK ENSBTAP00000027214/1-1047 LGFGMGIEFR EGSLVINSKN QYKLKKGMVF SINLGFSDLT NKEGKKPEEK 401 450 bmy_19924T0/1-974 TYALFIGDTV LVDEDGPATI LTSVKKKVKN VGIFLKNEDE EEEEEEKDEA BACU008607/1-1110 TYALFIGDTV LVDEDGPATI LTSVKKKVKN VGIFLKNEDE EEEEEEKDEA ENSTTRP00000015229/1-1046 TYALFIGDTV LVDEDGPATI LTSVKKKVKN VGIFLKNEDE EEEEEEKDEA ENSP00000216297/1-1047 TYALFIGDTV LVDEDGPATV LTSVKKKVKN VGIFLKNEDE EEEEEEKDEA ENSBTAP00000027214/1-1047 TYALFIGDTV LVDEDGPATV LTSVKKKVKN VGIFLKNEDE EEEEEEKDEA 451 500 bmy_19924T0/1-974 EDLLGRGSRA ALLTERTRNE MTAEEKRRAH QKELAAQLNE EAKRRLTEQK BACU008607/1-1110 EDLLGRGSRA ALLTERTRNE MTAEEKRRAH QKELAAQLNE EAKRRLTEQK ENSTTRP00000015229/1-1046 EDLLGRGSRA ALLTERTRNE MTAEEKRRAH QKELAAQLNE EAKRRLTEQK ENSP00000216297/1-1047 EDLLGRGSRA ALLTERTRNE MTAEEKRRAH QKELAAQLNE EAKRRLTEQK ENSBTAP00000027214/1-1047 EDLLGRGSRA ALLTERTRNE MTAEEKRRAH QKELAAQLNE EAKRRLTEQK 501 550 bmy_19924T0/1-974 GEQQIQKARK SNVSYKNPSL MPKEPHIREM KIYIDKKYET VIMPVFGIAT BACU008607/1-1110 GEQQIQKARK SNVSYKNPSL MPKEPHIREM KIYIDKKYET VIMPVFGIAT ENSTTRP00000015229/1-1046 GEQQIQKARK SNVSYKNPSL MPKEPHIREM KIYIXXXXXX XXMPVFGIAT ENSP00000216297/1-1047 GEQQIQKARK SNVSYKNPSL MPKEPHIREM KIYIDKKYET VIMPVFGIAT ENSBTAP00000027214/1-1047 GEQQIQKARK SNVSYKNPSL MPKEPHIREM KIYIDKKYET VIMPVFGIAT 551 600 bmy_19924T0/1-974 PFHIATIKNI SMSVEGDYTY LRINFYCPGS ALGRNEGNIF PNPEATFVKE BACU008607/1-1110 PFHIATIKNI SMSVEGDYTY LRINFYCPGS ALGRNEGNIF PNPEATFVKE ENSTTRP00000015229/1-1046 PFHI-TIKNI SMSVEGDYTY LRINFYCPGS ALGRNEGNIF PNPEATFVKE ENSP00000216297/1-1047 PFHIATIKNI SMSVEGDYTY LRINFYCPGS ALGRNEGNIF PNPEATFVKE ENSBTAP00000027214/1-1047 PFHIATIKNI SMSVEGDYTY LRINFYCPGS ALGRNEGNIF PNPEATFVKE 601 650 bmy_19924T0/1-974 ITYRASNMKA PGEQTVPALN LQNAFRIIKE VQKRYKTREA EEKEKEGIVK BACU008607/1-1110 ITYRASNMKA PGEQTVPALN LQNAFRIIKE VQKRYKTREA EEKEKEGIVK ENSTTRP00000015229/1-1046 ITYRASNMKA PGEQTVPALN LQNAFRIIKE VQKRYKTREA EEKEKEGIVK ENSP00000216297/1-1047 ITYRASNIKA PGEQTVPALN LQNAFRIIKE VQKRYKTREA EEKEKEGIVK ENSBTAP00000027214/1-1047 ITYRASNMKA PGEQTVPALN LQNAFRIIKE VQKRYKTREA EEKEKEGIVK 651 700 bmy_19924T0/1-974 QDSLVINLNR SNPKLKDLYI RPNIAQKRMQ GSLEAHVNGF RFTSVRGD-- BACU008607/1-1110 QDSLVINLNR SNPKLKDLYI RPNIAQKRMQ GSLEAHVNGF RFTSVRGDKV ENSTTRP00000015229/1-1046 QDSLVINLNR SNPKLKDLYI RPNIAQKRMQ GSLEAHVNGF RFTSVRGDKV ENSP00000216297/1-1047 QDSLVINLNR SNPKLKDLYI RPNIAQKRMQ GSLEAHVNGF RFTSVRGDKV ENSBTAP00000027214/1-1047 QDSLVINLNR SNPKLKDLYI RPNIAQKRMQ GSLEAHVNGF RFTSVRGDKV 701 750 bmy_19924T0/1-974 ---------- ---------- -------KNA IMFGKKRHTD VQFYTEVGEI BACU008607/1-1110 DILYNNIKHA LFQPCDGEMI IVLHFHLKNA IMFGKKRHTD VQFYTEVGEI ENSTTRP00000015229/1-1046 DILYNNIKHA LFQPCDGEMI IVLHFHLKNA IMFGKKRHTD VQFYTEVGEI ENSP00000216297/1-1047 DILYNNIKHA LFQPCDGEMI IVLHFHLKNA IMFGKKRHTD VQFYTEVGEI ENSBTAP00000027214/1-1047 DILYNNIKHA LFQPCDGEMI IVLHFHLKNA IMFGKKRHTD VQFYTEVGEI 751 800 bmy_19924T0/1-974 TTDLGKHQHM HDRDDLYAEQ MEREMRHKLK TAFKNFIEKV EALTKEELEF BACU008607/1-1110 TTDLGKHQHM HDRDDLYAEQ MEREMRHKLK TAFKNFIEKV EALTKEELEF ENSTTRP00000015229/1-1046 TTDLGKHQHM HDRDDLYAEQ MEREMRHKLK TAFKNFIEKV EALTKEELEF ENSP00000216297/1-1047 TTDLGKHQHM HDRDDLYAEQ MEREMRHKLK TAFKNFIEKV EALTKEELEF ENSBTAP00000027214/1-1047 TTDLGKHQHM HDRDDLYAEQ MEREMRHKLK TAFKNFIEKV EALTKEELEF 801 850 bmy_19924T0/1-974 EVPFRDLGFN GAPYRSTCLL QPTSSALVNA TEWPPFVVTL DEVELIHFER BACU008607/1-1110 EVPFRDLGFN GAPYRSTCLL QPTSSALVNA TEWPPFVVTL DEVELIHFER ENSTTRP00000015229/1-1046 EVPFRDLGFN GAPYRSTCLL QPTSSALVNA TEWPPFVVTL DEVELIHFER ENSP00000216297/1-1047 EVPFRDLGFN GAPYRSTCLL QPTSSALVNA TEWPPFVVTL DEVELIHFER ENSBTAP00000027214/1-1047 EVPFRDLGFN GAPYRSTCLL QPTSSALVNA TEWPPFVVTL DEVELIHFER 851 900 bmy_19924T0/1-974 VQFHLKNFDM VIVYKDYSKK VTMINAIPVA SLDPIKEWLN SCDLKYTEGV BACU008607/1-1110 VQFHLKNFDM VIVYKDYSKK VTMINAIPVA SLDPIKEWLN SCDLKYTEGV ENSTTRP00000015229/1-1046 VQFHLKNFDM VIVYKDYSKK VTMINAIPVA SLDPIKEWLN SCDLKYTEGV ENSP00000216297/1-1047 VQFHLKNFDM VIVYKDYSKK VTMINAIPVA SLDPIKEWLN SCDLKYTEGV ENSBTAP00000027214/1-1047 VQFHLKNFDM VIVYKDYSKK VTMINAIPVA SLDPIKEWLN SCDLKYTEGV 901 950 bmy_19924T0/1-974 QSLNWTKIMK TIVDDPEGFF EQGGWSFLEP EGEGSDAEEG DSESEIEDET BACU008607/1-1110 QSLNWTKIMK TIVDDPEGFF EQGGWSFLEP EGEGSDAEEG DSESEIEDET ENSTTRP00000015229/1-1046 QSLNWTKIMK TIVDDPEGFF EQGGWSFLEP EGEGSDAEEG DSESEIEDET ENSP00000216297/1-1047 QSLNWTKIMK TIVDDPEGFF EQGGWSFLEP EGEGSDAEEG DSESEIEDET ENSBTAP00000027214/1-1047 QSLNWTKIMK TIVDDPEGFF EQGGWSFLEP EGEGSDAEEG DSESEIEDET 951 1000 bmy_19924T0/1-974 FNPSEDDYEE EEEDSDEDYS SEAEESDYSK ESLGSEEESG KDWDELEEEA BACU008607/1-1110 FNPSEDDYEE EEEDSDEDYS SEAEESDYSK ESLGSEEESG KDWDELEEEA ENSTTRP00000015229/1-1046 FNPSEDDYEE EEEDSDEDYS SEAEESDYSK ESLGSEEESG KDWDELEEEA ENSP00000216297/1-1047 FNPSEDDYEE EEEDSDEDYS SEAEESDYSK ESLGSEEESG KDWDELEEEA ENSBTAP00000027214/1-1047 FNPSEEDYEE EEEDSDEDYS SEAEESDYSK ESLGSEEESG KDWDELEEEA 1001 1050 bmy_19924T0/1-974 RKADRESRYE EEEEQSRSMS RKRKASVHSS GRGSNRGSRH SSAPPKKKRK BACU008607/1-1110 RKADRESRYE EEEEQSRSMS RKRKASVHSS GRGSNRGSRH SSAPPKKKRK ENSTTRP00000015229/1-1046 RKADRESRYE EEEEQSRSMS RKRKASVHSS GRGSNRGSRH SSAPPKKKRK ENSP00000216297/1-1047 RKADRESRYE EEEEQSRSMS RKRKASVHSS GRGSNRGSRH SSAPPKKKRK ENSBTAP00000027214/1-1047 RKADRESRYE EEEEQSRSMS RKRKASVHSS GRGSNRGSRH SSAPPKKKRK 1051 1100 bmy_19924T0/1-974 ---------- ---------- ---------- ---------- ---------- BACU008607/1-1110 GPFVRTNLPG ELQAHQDACQ WPHPDGKGGG VPEEGQRLPL LINTVLFLSL ENSTTRP00000015229/1-1046 ---------- ---------- ---------- ---------- ---------- ENSP00000216297/1-1047 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000027214/1-1047 ---------- ---------- ---------- ---------- ---------- 1101 1150 bmy_19924T0/1-974 ---------- - BACU008607/1-1110 PVTFCQDIVG F ENSTTRP00000015229/1-1046 ---------- - ENSP00000216297/1-1047 ---------- - ENSBTAP00000027214/1-1047 ---------- -