KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:31:53 2014 Check: 00 .. Name: bmy_16347T0/1-495 Len: 531 Check: 5272 Weight: 1.00 Name: BACU008314/1-526 Len: 531 Check: 5882 Weight: 1.00 Name: ENSP00000221265/1-531 Len: 531 Check: 3828 Weight: 1.00 Name: ENSTTRP00000003335/1-526 Len: 531 Check: 5892 Weight: 1.00 Name: ENSBTAP00000027224/1-355 Len: 531 Check: 2466 Weight: 1.00 // 1 50 bmy_16347T0/1-495 MAPTIQTQAQ REDGHRPNSH RTLPE----- ---------- ---------- BACU008314/1-526 MAPTIQTQAQ REDGHRPNSH RTLPERSGVV CRVKYCNSLP DIPFDPKFIT ENSP00000221265/1-531 MAPTIQTQAQ REDGHRPNSH RTLPERSGVV CRVKYCNSLP DIPFDPKFIT ENSTTRP00000003335/1-526 MAPTIQTQAQ REDGHRPNSH RTLPERSGVV CRVKYCNSLP DIPFDPKFIT ENSBTAP00000027224/1-355 MAPTIQTQAQ REDGHRPNSH RTLPERSGVV CRVKYCNSLP DIPFDPKFIT 51 100 bmy_16347T0/1-495 ------RFVQ YKATSLEKQH KHDLLTEPDL GVTIDLINPD TYRIDPSVLL BACU008314/1-526 YPFDQNRFVQ YKATSLEKQH KHDLLTEPDL GVTIDLINPD TYRIDPSVLL ENSP00000221265/1-531 YPFDQNRFVQ YKATSLEKQH KHDLLTEPDL GVTIDLINPD TYRIDPNVLL ENSTTRP00000003335/1-526 YPFDQNRFVQ YKATSLEKQH KHDLLTEPDL GVTIDLINPD TYRIDPNVLL ENSBTAP00000027224/1-355 YPFDQNRFVQ YKATSLEKQH KHDLLTEPDL GVTIDLINPD TYRIDPNVLL 101 150 bmy_16347T0/1-495 DPADEKLLEE EIQAPTSSKR SQQHAKVVPW MRKTEYISTE FNRYGISNEK BACU008314/1-526 DPADEKLLEE EIQAPTSSKR SQQHAKVVPW MRKTEYISTE FNRYGISNEK ENSP00000221265/1-531 DPADEKLLEE EIQAPTSSKR SQQHAKVVPW MRKTEYISTE FNRYGISNEK ENSTTRP00000003335/1-526 DPADEKLLEE EIQAPTSSKR SQQHAKVVPW MRKTEYISTE FNRYGISNEK ENSBTAP00000027224/1-355 DPADEKLLEE EIQAPTSSKR SQQHAKVVPW MRKTEYISTE FNRYGISNEK 151 200 bmy_16347T0/1-495 PEVKIGVSVK QQFTEEEIYK DRDSQITAIE KTFEDAQKSI SQHYSKPRVT BACU008314/1-526 PEVKIGVSVK QQFTEEEIYK DRDSQITAIE KTFEDAQKSI SQHYSKPRVT ENSP00000221265/1-531 PEVKIGVSVK QQFTEEEIYK DRDSQITAIE KTFEDAQKSI SQHYSKPRVT ENSTTRP00000003335/1-526 PEVKIGVSVK QQFTEEEIYK DRDSQITAIE KTFEDAQKSI SQHYSKPRVT ENSBTAP00000027224/1-355 PEVKIGVSVK QQFTEEEIYK DRDSQITAIE KTFEDAQKSI SQHYSKPRVT 201 250 bmy_16347T0/1-495 PVEVMPVFPD FKMWINPCAQ VIFDSDPAPK DTSGAAALEM MSQAMIRGMM BACU008314/1-526 PVEVMPVFPD FKMWINPCAQ VIFDSDPAPK DTSGAAALEM MSQAMIRGMM ENSP00000221265/1-531 PVEVMPVFPD FKMWINPCAQ VIFDSDPAPK DTSGAAALEM MSQAMIRGMM ENSTTRP00000003335/1-526 PVEVMPVFPD FKMWINPCAQ VIFDSDPAPK DTSGAAALEM MSQAMIRGMM ENSBTAP00000027224/1-355 PVEVMPVFPD FKMWINPCAQ VIFDSDPAPK DTSGAAALEM MSQAMIRGMM 251 300 bmy_16347T0/1-495 DEEGNQFVAY FLPVEETLKK RKRDQEEEMD YAPDDVYDYK IAREYNWNVK BACU008314/1-526 DEEGNQFVAY FLPVEETLKK RKRDQEEEMD YAPDDVYDYK IAREYNWNVK ENSP00000221265/1-531 DEEGNQFVAY FLPVEETLKK RKRDQEEEMD YAPDDVYDYK IAREYNWNVK ENSTTRP00000003335/1-526 DEEGNQFVAY FLPVEETLKK RKRDQEEEMD YAPDDVYDYK IAREYNWNVK ENSBTAP00000027224/1-355 DEEGNQFVAY FLPVEETLKK RKRDQEEEMD YAPDDVYDYK IAREYNWNVK 301 350 bmy_16347T0/1-495 NKASKGYEEN YFFIFREGDG VYYNELETRV RLSKRRAKAG VQSGTNALLV BACU008314/1-526 NKASKGYEEN YFFIFREGDG VYYNELETRV RLSKRRAKAG VQSGTNALLV ENSP00000221265/1-531 NKASKGYEEN YFFIFREGDG VYYNELETRV RLSKRRAKAG VQSGTNALLV ENSTTRP00000003335/1-526 NKASKGYEEN YFFIFREGDG VYYNELETRV RLSKRRAKAG VQSGTNALLV ENSBTAP00000027224/1-355 NKASKGYEEN YFFIFREGDG VYYNELETRV RLSKRRAKAG VQSGTNALLV 351 400 bmy_16347T0/1-495 VKHRDMNEKE LEAQEARKAQ LENHEPEEEE EEEMETEEKE AGGSDEEREK BACU008314/1-526 VKHRDMNEKE LEAQEARKAQ LENHEPEEEE EEEMETEEKE AGGSDEEQEK ENSP00000221265/1-531 VKHRDMNEKE LEAQEARKAQ LENHEPEEEE EEEMETEEKE AGGSDEEQEK ENSTTRP00000003335/1-526 VKHRDMNEKE LEAQEARKAQ LENHEPEEEE EEEMETEEKE AGGSDEEREK ENSBTAP00000027224/1-355 VKHRD----- ---------- ---------- ---------- ---------- 401 450 bmy_16347T0/1-495 GSSSEKEGSE DERSGSESER EEGDRDEASD RSGSGEEESS EDEARAARDK BACU008314/1-526 GSSSEKEGSE DERSGSESER EEGDRDEASD KSGSGEEESS EDEARAARDK ENSP00000221265/1-531 GSSSEKEGSE DEHSGSESER EEGDRDEASD KSGSGEDESS EDEARAARDK ENSTTRP00000003335/1-526 GSSSEKEGSE DERSGSESER EEGDRDEASD KSGSGEDESS EDEARAARDK ENSBTAP00000027224/1-355 ---------- ---------- ---------- ---------- ---------- 451 500 bmy_16347T0/1-495 EEIFGSDADS EDDADSDDED RGRAH-GSDN DSDSGSDGAG QR----SRSA BACU008314/1-526 EEIFGSDADS EDDADSDDED RGRAH-GSDN DSDSGSDGAG QR----SRSA ENSP00000221265/1-531 EEIFGSDADS EDDADSDDED RGQAQGGSDN DSDSGSNGGG QRSRSHSRSA ENSTTRP00000003335/1-526 EEIFGSDADS EDDADSDDED RGRAH-GSDN DSDSGSDGGG QR----SRSA ENSBTAP00000027224/1-355 ---------- ---------- ---------- ---------- ---------- 501 550 bmy_16347T0/1-495 SPFPSGSEHS AQEDGSEAAA SDSSEAESDS D BACU008314/1-526 SPFPSGSEHS AQEDGSEAAA SDSSEAESDS D ENSP00000221265/1-531 SPFPSGSEHS AQEDGSEAAA SDSSEADSDS D ENSTTRP00000003335/1-526 SPFPSGSEHS AQEDGSEAAA SDSSEAESDS D ENSBTAP00000027224/1-355 ---------- ---------- ---------- -