KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:31:56 2014 Check: 00 .. Name: ENSP00000420418/1-642 Len: 643 Check: 7859 Weight: 1.00 Name: ENSBTAP00000027245/1-640 Len: 643 Check: 570 Weight: 1.00 Name: ENSTTRP00000014857/1-641 Len: 643 Check: 2846 Weight: 1.00 Name: bmy_20289T0/1-641 Len: 643 Check: 5642 Weight: 1.00 Name: BACU010918/1-140 Len: 643 Check: 8207 Weight: 1.00 // 1 50 ENSP00000420418/1-642 MAEAAPAPTS EWDSECLTSL QPLPLPTPPA ANEAHLQTAA ISLWTVVAAV ENSBTAP00000027245/1-640 MAEAAPAPTS EWDSECLTSL QALPLPAAPA ANEAHLQTAA ISLWTVVAAV ENSTTRP00000014857/1-641 MVDAVPAPTS EWDSECLTSL QALPLPTPPA ANEAHLQTAA ISLWTVVAAV bmy_20289T0/1-641 MAEAAPAPTS EWDSECLTSL QALPLPTPPA ANEAHLQTAA ISLWTVVAAV BACU010918/1-140 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000420418/1-642 QAIERKVEIH SRRLLHLEGR TGTAEKKLAS CEKTVTELGN QLEGKWAVLG ENSBTAP00000027245/1-640 QAIERKVEVH SRRLLHLEGR TGTAEKKLAS CEKTVADLGN QLEGKWAVLG ENSTTRP00000014857/1-641 QAIERKVEVH SRRLLHLEGR TGTAEKKLAS CEKTVADLGN QLEGKWAVLG bmy_20289T0/1-641 QAIERKVEVH SRRLLHLEGR TGTAEKKLAS CEKTVADLGN QLEGKWAVLG BACU010918/1-140 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000420418/1-642 TLLQEYGLLQ RRLENLENLL RNRNFWILRL PPGIKGDIPK VPVAFDDVSI ENSBTAP00000027245/1-640 TLLQEYGLLQ RRLENLENLL RNRNFWILRL PPGIKGDIPK VPVTFDDISI ENSTTRP00000014857/1-641 TLLQEYGLLQ RRLENLENLL RNRNFWILRL PPGIKGDIPK VPVTFDDISI bmy_20289T0/1-641 TLLQEYGLLQ RRLENLENLL RNRNFWILRL PPGIKGDIPK VPVTFDDISI BACU010918/1-140 ---------- ---------- ---------- ---------- ---------- 151 200 ENSP00000420418/1-642 YFSTPEWEKL EEWQKELYKN IMKGNYESLI SMDYAINQPD VLSQIQPEGE ENSBTAP00000027245/1-640 YFSTPEWEKL EEWQKELYKN IMKGNYESLI SMDYAMNQPD VLSQIQPEGD ENSTTRP00000014857/1-641 YFSTPEWEKL EEWQKELYKN IMKGNYESLI SMDYAMNQPD VLSQIQPEGD bmy_20289T0/1-641 YFSTPEWEKL EEWQKELYKN IMKGNYESLI SMDYAMNQPD VLSQIQPEGD BACU010918/1-140 ---------- ---------- ---------- ---------- ---------- 201 250 ENSP00000420418/1-642 HNTEDQAGPE ESEIPTDPSE EPGISTSDIL SWIKQEEEPQ VGAPPESKES ENSBTAP00000027245/1-640 RNTEDQTGPE ESGIPTDPSE EPGISTSDIL SWIKQEEETQ VGAPQEPKES ENSTTRP00000014857/1-641 HNTEDQAGPE ESEIPTDPTE XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX bmy_20289T0/1-641 HNTEDQAGPE ESEIPTDPSE EPGISTSDIL SWIKQEEETQ VGTPQEPKES BACU010918/1-140 ---------- ---------- ---------- ---------- ---------- 251 300 ENSP00000420418/1-642 DVYKSTYADE ELVIKAEGLA RSSLCPEVPV PFSSPP-AAA KDAFSDVAFK ENSBTAP00000027245/1-640 DMCKGTYADE ELVIKAEGLA RASLCPEVPV AFSSPA-AAA KEPFPDMAFK ENSTTRP00000014857/1-641 XXXXXXXXXE ELVIKAEGLA RASLCPEVPV TFSSPP-AAA KDTFPDVAFK bmy_20289T0/1-641 DMCKSTYADE ELVIKAEGLA RASLCPEVPV TFSSPPAAAA KDTFTDVAFK BACU010918/1-140 ---------- ---------- ---------- ---------- ---------- 301 350 ENSP00000420418/1-642 SQQSTSMTPF GRPATDLPEA SEGQVTFTQL GSYPLPPPVG EQVFSCHHCG ENSBTAP00000027245/1-640 SPQSAPLAPF GRPAADLAEA SEGQVTFTQL GTYPLPPPAG EPVFSCHHCG ENSTTRP00000014857/1-641 TPQSAPMAPF GRPATELAEA SEGQVTFTQL GSYPLPPPAG EQXXXXXXXX bmy_20289T0/1-641 SPQSAPMAPF GRPATDLAEA SEGQVTFTQL GSYPLPPPAG EQVFSCHHCG BACU010918/1-140 ---------- ---------- ---------- ---------- ---------- 351 400 ENSP00000420418/1-642 KNLSQDMLLT HQCSHATEHP LPCAQCPKHF TPQADLSSTS QDHASETPPT ENSBTAP00000027245/1-640 KSLSQDLLLT HQCGPPGEHA APCAQCPKHL PTPAD--GGP PAPARETPPT ENSTTRP00000014857/1-641 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX bmy_20289T0/1-641 KSLSQDMLLT HRCGPAGERP APCAQCPRHF PPHAD--RGP QPPAGETPPT BACU010918/1-140 ---------- ---------- ---------- ---------- ---------- 401 450 ENSP00000420418/1-642 CPHCARTFTH PSRLTYHLRV HNSTERPFPC PDCPKRFADQ ARLTSHRRAH ENSBTAP00000027245/1-640 CPHCARTFTH PSRLTYHLRV HNSAERPFPC PDCPKRFADQ ARLASHRRAH ENSTTRP00000014857/1-641 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX bmy_20289T0/1-641 CPHCARTFTH PSRLTYHLRV HNSTERPFPC PDCPKRFADQ ARLASHRRAH BACU010918/1-140 ---------- ---------- ---------- ---------- ---------- 451 500 ENSP00000420418/1-642 ASERPFRCAQ CGRSFSLKIS LLLHQRGHAQ ERPFSCPQCG IDFNGHSALI ENSBTAP00000027245/1-640 ASERPFRCAQ CGRSFSLKIS LLLHQRGHAQ ERPFSCPQCG IDFNGHSALI ENSTTRP00000014857/1-641 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXI bmy_20289T0/1-641 ASERPFRCAQ CGRSFSLKIS LLLHQRGHAQ ERPFSCPQCG IDFNGHSALI BACU010918/1-140 ---------- ---------- ---------- ---------- ---------- 501 550 ENSP00000420418/1-642 RHQMIHTGER PYPCTDCSKS FMRKEHLLNH RRLHTGERPF SCPHCGKSFI ENSBTAP00000027245/1-640 RHQMIHTGER PYPCTDCSKS FMRKEHLLNH RRLHTGERPF SCTHCGKSFI ENSTTRP00000014857/1-641 RHQMIHTGER PYPCPDCSKS FMRKEHLLNH RRLHTGERPF SCAHCGKSFI bmy_20289T0/1-641 RHQMIHTGER PYPCPDCSKS FMRKEHLLNH RRLHTGERPF SCAHCGKSFI BACU010918/1-140 ---MIHTGER PYPCPDCSKS FMRKEHLLNH RRLHTGERPF SCAHCGKSFI 551 600 ENSP00000420418/1-642 RKHHLMKHQR IHTGERPYPC SYCGRSFRYK QTLKDHLRSG HNGGCGGDSD ENSBTAP00000027245/1-640 RKHHLMKHQR IHTGERPYPC AQCGRSFRYK QTLKDHLRAG HGGGCGGDRD ENSTTRP00000014857/1-641 RKHHLMKHQR IHTGERPYPC AECGRSFRYK QTLKDHLRSG HGGGCGGRSD bmy_20289T0/1-641 RKHHLMKHQR IHTGERPYPC AECGRSFRYK QTLKDHLRSG HGGGCGGHSD BACU010918/1-140 RKHHLMKHQR IHTGERPYPC AECGRSFRYK QTLKDHLRSG HGGGCGGHSD 601 650 ENSP00000420418/1-642 PSGQPPNPPG PLITGLETSG LGVNTEGLET NQWYGEGSGG GVL ENSBTAP00000027245/1-640 PSGPPPDPPG PLLPGLEASG LGVNPEGLEA NQWYGEGSGG AVL ENSTTRP00000014857/1-641 PSGQPPDPPG PLLTGLETAG LGVNTEGLEA NQWYGEGTGG GV- bmy_20289T0/1-641 PSGQPPDPPG PLLTGLETAG LGVNTEGLEA NQWYGEGTGG GVQ BACU010918/1-140 PSGQPPDPPG PLLTGLETAG LGVNTEGLEA NQWYGEGTGG GVQ