KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:31:58 2014 Check: 00 .. Name: bmy_17223T0/1-170 Len: 347 Check: 3385 Weight: 1.00 Name: ENSP00000346173/1-346 Len: 347 Check: 8019 Weight: 1.00 Name: ENSTTRP00000003742/1-336 Len: 347 Check: 6265 Weight: 1.00 Name: BACU008267/1-246 Len: 347 Check: 2959 Weight: 1.00 Name: ENSBTAP00000027250/1-255 Len: 347 Check: 5718 Weight: 1.00 // 1 50 bmy_17223T0/1-170 -MYSVIFQMT QTI-L----- ---------- ---------- ---------- ENSP00000346173/1-346 -MYLSLWVTI NTVNLRNTLS GLRGAVTTVG MIKSDVPGTQ EWLDERRRQG ENSTTRP00000003742/1-336 -MYLSQWVMV KKN-LRDTLS GPTATVTSM- ---ADAPGTQ ECLSEGDLH- BACU008267/1-246 MAELRALVAV KRV-I----- ---------- ---------- ---------- ENSBTAP00000027250/1-255 MAELRALVAV KRV-I----- ---------- ---------- ---------- 51 100 bmy_17223T0/1-170 ---------- ---------- ---------- ---------- ---------- ENSP00000346173/1-346 DLPLPTNSNP VLSLELCDPG QGPAPFQAVV VLIQPGRGLA LRPPPSCLFP ENSTTRP00000003742/1-336 ----PSVNST SLSLELWDPG QGPAPFQVPV VSVQPARGLV SRPLPSRPLP BACU008267/1-246 ---------- ---------- ----DFAV-- ---------- ---------- ENSBTAP00000027250/1-255 ---------- ---------- ----DFAV-- ---------- ---------- 101 150 bmy_17223T0/1-170 ---------- ---------- ---------- ---------- ---------- ENSP00000346173/1-346 PDPTPSPPAG QIRVKPDRTG VVTDGVKHSM NPFCEIAVEE AVRLKEKKLV ENSTTRP00000003742/1-336 PDPATSPPAE QIRVKSDGTG VVTDGVKHSM NPFCEIAVEE AVRLKEKKLV BACU008267/1-246 ---------- KIRVKSDRTG VVTDGVKHSM NPFCEIAVEE AVRLKEKKLV ENSBTAP00000027250/1-255 ---------- KIRVKPDKTG VVTDGVKHSM NPFCEIAVEE AVRLKEKKLV 151 200 bmy_17223T0/1-170 ---------- ---------- ---------- ------EADL LGPLPVAWVL ENSP00000346173/1-346 KEVIAVSCGP AQCQETIRTA LAMGADRGIH VEVPPAEAER LGPLQVARVL ENSTTRP00000003742/1-336 KEVIAVSCGP TQCQETIRTA LAMGADRGIH VEVPAAEVDR LGPLQVARVL BACU008267/1-246 KEVIAVSCGP TQCQETIRTA LAMGADRGIH VEVPAAEADR LGPLQVARVL ENSBTAP00000027250/1-255 KEIIAVSCGP AQCQETIRTA LAMGADRGIH VEVPAAEANH LGPLQVARVL 201 250 bmy_17223T0/1-170 AKLAEKEKVD ---LGKQAID DNCNQTGHMT AGFLDWPQGT FASQVTLEGD ENSP00000346173/1-346 AKLAEKEKVD LVLLGKQAID DDCNQTGQMT AGFLDWPQGT FASQVTLEGD ENSTTRP00000003742/1-336 AKLAEKEKVD LVLLGKQAID DDCNQTGQMT AGFLDWPQGT FASQVTLEGD BACU008267/1-246 AKLAEKEK-- -------AID DDCNQTGQMT AGFLDWPQGT FASQVTMEGD ENSBTAP00000027250/1-255 AKLAEKEKVD LVLLGKQAID DDCNQTGQMT AGFLDWPQGT FASQVTLEGD 251 300 bmy_17223T0/1-170 KVKGEQEIDG GLETLLLKLP DVVTADLQLN KPHYDTLPNI MXA-KKKIEV ENSP00000346173/1-346 KLKVEREIDG GLETLRLKLP AVVTADLRLN EPRYATLPNI MKAKKKKIEV ENSTTRP00000003742/1-336 KVKVEREVDG GLETLRLKLP AVVTADLRLN EPRYATLPNI MKAKKKKIEV BACU008267/1-246 KMKVEREIDG GLETLRLKLP AVVTADLRLN EPRYATLPNI MKAKKKKIEV ENSBTAP00000027250/1-255 KIKVEREIDG GLETLRLKLP AVVTADLRLN EPRYATLPNI MKAKKKKIEV 301 350 bmy_17223T0/1-170 IKAGDLGVDL TSKFSVISLE DPPQHTAGVK VETAEDLVAK LREIGHI ENSP00000346173/1-346 IKPGDLGVDL TSKLSVISVE DPPQRTAGVK VETTEDLVAK LKEIGRI ENSTTRP00000003742/1-336 IKAGDLGVDL TSKLSVISVE DPPQRTAGVK VETTEDLVAK LKEIGRI BACU008267/1-246 IKAGNLGVDL TSKLSVISVE DPPQRTAGVK VETTEDLVAK LKEIGRI ENSBTAP00000027250/1-255 IKAGDLGVDL TSKLSVISVE DPPQRTAGVK VETTEDLVAK LKEIGRI