KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:31:59 2014 Check: 00 .. Name: ENSBTAP00000027254/1-783 Len: 914 Check: 7275 Weight: 1.00 Name: bmy_09941T0/1-773 Len: 914 Check: 8413 Weight: 1.00 Name: ENSP00000343526/1-785 Len: 914 Check: 3914 Weight: 1.00 Name: BACU000205/1-480 Len: 914 Check: 2961 Weight: 1.00 Name: ENSTTRP00000013152/1-780 Len: 914 Check: 1877 Weight: 1.00 // 1 50 ENSBTAP00000027254/1-783 MPGVI--PSE SN-------- ---------- ---------- ---GLSRGSP bmy_09941T0/1-773 -MGTLEFPVD RNNVLSMACM LIAGGELRVG NWCWQKRFGS RVSGAASGAP ENSP00000343526/1-785 MPGVI--PSE SN-------- ---------- ---------- ---GLSRGSP BACU000205/1-480 MPGVI--PSE SN-------- ---------- ---------- ---GLSRGSP ENSTTRP00000013152/1-780 -PGVI--PSE SN-------- ---------- ---------- ---GLSRGSP 51 100 ENSBTAP00000027254/1-783 SKKN------ ---------- ---------- ---------- ---------- bmy_09941T0/1-773 CRSRVGTGAG AAGRSFGDVV GAGAWQDRAA ARVPALESEW SLPCGEGDPA ENSP00000343526/1-785 SKKN------ ---------- ---------- ---------- ---------- BACU000205/1-480 SKKN------ ---------- ---------- ---------- ---------- ENSTTRP00000013152/1-780 SKKN------ ---------- ---------- ---------- ---------- 101 150 ENSBTAP00000027254/1-783 ---------- ---------- -----RLSLK F--------- ---------- bmy_09941T0/1-773 SFSVGRGPPR ARGRGSPVAP ALSPVRLALG HDQIYGRNIF DVTTPSDKDS ENSP00000343526/1-785 ---------- ---------- -----RLSLK F--------- ---------- BACU000205/1-480 ---------- ---------- -----RLSLK F--------- ---------- ENSTTRP00000013152/1-780 ---------- ---------- -----RLSLK F--------- ---------- 151 200 ENSBTAP00000027254/1-783 ------FQKK ETKRALDFTD SQENEEKTSE YKGSEIDQVV PAAQSSPINC bmy_09941T0/1-773 QEQEMVFQKT ETKRALDFTD SQENEEKTSE YRGSEIDQAV PAAQSSPINC ENSP00000343526/1-785 ------FQKK ETKRALDFTD SQENEEKASE YRASEIDQVV PAAQSSPINC BACU000205/1-480 ------FQKK ETKRALDFTD SQENEEKTSE YRGSEIDQVV PAAQSSPVNC ENSTTRP00000013152/1-780 ------FQKK ETKRALDFTD SQENEEKTSE YRGSEIDQVV PAAQSSPVNC 201 250 ENSBTAP00000027254/1-783 EKRENLLPFV GLNNLGNTCY LNSILQVLYF CPGFKSGVKH LFNIISRKKE bmy_09941T0/1-773 EKRENLLP-- ---------- ---------- ---------- -------KKE ENSP00000343526/1-785 EKRENLLPFV GLNNLGNTCY LNSILQVLYF CPGFKSGVKH LFNIISRKKE BACU000205/1-480 EKRENLLPFV GLNNLGNTCY LNSILQVLYF CPGFKSGVKH LFNIISRKKE ENSTTRP00000013152/1-780 EKRENLLPFV GLNNLGNTCY LNSILQVLYF CPGFKSGVKH LFNIISRKKE 251 300 ENSBTAP00000027254/1-783 ALKDEANQKD KGNCKEDSLA SYELICSLQS LIISVEQLQA SFLLNPEKYT bmy_09941T0/1-773 ALKDEASQKD KGNCKDDSSA SYELICSLQS LIISVEQLQA SFLLNPEXYT ENSP00000343526/1-785 ALKDEANQKD KGNCKEDSLA SYELICSLQS LIISVEQLQA SFLLNPEKYT BACU000205/1-480 VLKDESSQKD KGNCKEDSSA SYELICSLQS LIISVEQLQA SFLLNPEKYT ENSTTRP00000013152/1-780 ALKDEASPKD KGSCKEDSSA SYELICSLQS LIISVEQLQA SFLLNPEKYT 301 350 ENSBTAP00000027254/1-783 DELATQPRRL LNTLRELNPM YEGYLQHDAQ EVLECILGNI QETCQLLKKE bmy_09941T0/1-773 DELAXQPRRL LNSLRELNPM YEGYLQHDAQ EVLQCILGNI QETCQLLKK- ENSP00000343526/1-785 DELATQPRRL LNTLRELNPM YEGYLQHDAQ EVLQCILGNI QETCQLLKKE BACU000205/1-480 DELATQPRRL LNTLRELNPM YEGYLQHDAQ EVLQCILGNI QETCQLLKK- ENSTTRP00000013152/1-780 DELATQPRRL LNTLRELNPM YEGYLQHDAQ EVLQCILGNI QETCQLLKK- 351 400 ENSBTAP00000027254/1-783 EVKNVEDLST KVEE--YQKE EMSDNNSMEM DNMRHSEDYK EKLSKGNGKR bmy_09941T0/1-773 EVKNVAELST KVEE-KHQKE EMSGNSGMEM DNMRHSEDDK EKLPKVNGKR ENSP00000343526/1-785 EVKNVAELPT KVEEIPHPKE EMNGINSIEM DSMRHSEDFK EKLPKGNGKR BACU000205/1-480 E-KNVAELST KVEE-KHQKE EMSGNNSMEM DNMRHSEDYK EKLPKVNGKR ENSTTRP00000013152/1-780 EVKNVAELST KVEE-KHQKE EMSGNNSMEM DSMRHCEDYK EKLPKVNGKR 401 450 ENSBTAP00000027254/1-783 KSDAEFGNMK KKVKISKEHQ SSEENQRQTR SKRKAAGDTL EISHKIIPKH bmy_09941T0/1-773 KSDTEFGNMK KKVKVSKEHQ SLEENQRQTR SKRKATVDSL DISAKIIPKY ENSP00000343526/1-785 KSDTEFGNMK KKVKLSKEHQ SLEENQRQTR SKRKATSDTL ESPPKIIPKY BACU000205/1-480 KSDTEFGNMK KKVKVSKEHQ SLEENQRQTR SKRKATVDSL DIPAKIIPKY ENSTTRP00000013152/1-780 KSDTEFGNMK KKVKVSKEHQ SLEENQRQTR SKRKATVDSL DIPAKIIPKY 451 500 ENSBTAP00000027254/1-783 ISENESTRPS QRKSKVKINW LKSAAKQPSI LSKFCSMGKI ATNQGSKGHC bmy_09941T0/1-773 ISENESARPS QKKSRVKINW LKSAAKQPSI ISKFCSLGKI TTNQESKGQS ENSP00000343526/1-785 ISENESPRPS QKKSRVKINW LKSATKQPSI LSKFCSLGKI TTNQGVKGQS BACU000205/1-480 ISENESARPS QKKSRVKINW LKSAAKQPSI ISKFCSLGKI TTNQESKGQS ENSTTRP00000013152/1-780 ISENESARPS QKKSRVKINW LKSAAKQPSI ISKFCSLGKI TTNQESKGQC 501 550 ENSBTAP00000027254/1-783 KENEYDLEED LGKYENDNTT NDCELESPGN NDMPIHVNEV KPINKGAEQI bmy_09941T0/1-773 KENEYDLEED LGKYENDNIA NGCRLESPGN NVMP--VNEV KPINKGPEQI ENSP00000343526/1-785 KENECDPEED LGKCESDNTT NGCGLESPGN TVTPVNVNEV KPINKGEEQI BACU000205/1-480 KENEYDLEED LGKYENDNTA NGCGLESPGN NVMP--VNEV KPINKGAEQI ENSTTRP00000013152/1-780 KENEYDLEED LGKYENDNTA NGCGLESPGN NVMP--ANEV KPINKGAEQI 551 600 ENSBTAP00000027254/1-783 GFELVEKLFQ GQLVLRTRCL ECESLTERRE DFQDISVPVQ EDELSKVEEN bmy_09941T0/1-773 GFELVEKLFQ GQLVLRTRCL ECESLTERRE DFQDISVPVQ EDELSKVEES ENSP00000343526/1-785 GFELVEKLFQ GQLVLRTRCL ECESLTERRE DFQDISVPVQ EDELSKVEES BACU000205/1-480 GFELVEKLFQ GQLVLRTRCL ECESLTERRE DFQDISVPVQ EDELSKVEES ENSTTRP00000013152/1-780 GFELVEKLFQ GQLVLRTRCL ECESLTERRE DFQDISVPVQ EDELSKVEES 601 650 ENSBTAP00000027254/1-783 SEISPEPKTE MKTLRWAISQ FASVERIVGE DKYFCENCHH YTEAERSLLF bmy_09941T0/1-773 SEISPEPKTE MKTLRWAISQ FASVERIVGE DKYFCENCXH YTEAERSLLF ENSP00000343526/1-785 SEISPEPKTE MKTLRWAISQ FASVERIVGE DKYFCENCHH YTEAERSLLF BACU000205/1-480 SE-------- ---------- ---------- ---------- ---------- ENSTTRP00000013152/1-780 SEISPEPKTE MKTLRWAISQ FASVERIVGE DKYFCENCHH YTEAERSLLF 651 700 ENSBTAP00000027254/1-783 DKMPEVITIH LKCFAASGLE FDCYGGGLSK INTPLLTPLK LSLEEWSTKP bmy_09941T0/1-773 DKMPE----- ---------- ---------- INTPLLTPLK LSLEEWSTKP ENSP00000343526/1-785 DKMPEVITIH LKCFAASGLE FDCYGGGLSK INTPLLTPLK LSLEEWSTKP BACU000205/1-480 ---------- ---------- ---------- ---------- -SKQNWRLAW ENSTTRP00000013152/1-780 DKMPEVITIH LKCFAASGLE FDCYGGGLSK INTPLLTPLK LSLEEWSTKP 701 750 ENSBTAP00000027254/1-783 TNDSYGLFAV VMHSGITISS GHYTASVKVT DLNSLELDKE NFVIDQTCEI bmy_09941T0/1-773 TNDSYGLFAV VMHSGITISS GHYTASVKVT DLNSLELDKE NFVIDQMCEI ENSP00000343526/1-785 TNDSYGLFAV VMHSGITISS GHYTASVKVT DLNSLELDKG NFVVDQMCEI BACU000205/1-480 TME------- ---------- ---------- ---------- ---------- ENSTTRP00000013152/1-780 TNDSYGLFAV VMHSGITISS GHYTASVKVT DLNSLELDKE NFVIDQMCDI 751 800 ENSBTAP00000027254/1-783 GKPEPLNEEE VRGVVENYDN EEVSIRVSGN NQPSKVLNKK NVEAIGLLGG bmy_09941T0/1-773 GKPEPLNEEE ARGVVKNYDD EEVSIRVSGN TQPSKVLNKK NVEAIGLLGG ENSP00000343526/1-785 GKPEPLNEEE ARGVVENYND EEVSIRVGGN TQPSKVLNKK NVEAIGLLGG BACU000205/1-480 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000013152/1-780 GKPEPLNEEE ARGVVENYDD EEVSIRVSGN TQPSKVLNKK NVEAIGLLGG 801 850 ENSBTAP00000027254/1-783 QKSKADYELY NKASNPDKVA STALPENRNS ETNNTNGTDE SDSNKESSDQ bmy_09941T0/1-773 QKSKADYELY NKASNPDKVA STAFAENRNA ETNNTNGTHE SD-------- ENSP00000343526/1-785 QKSKADYELY NKASNPDKVA STAFAENRNS ETSDTTGTHE SDRNKESSDQ BACU000205/1-480 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000013152/1-780 QKSKADYELY NKASNPDKVA STAFAENRNS ETNNTNGTHE SDRNKESNDQ 851 900 ENSBTAP00000027254/1-783 TGINISGFEN KISYVVQSLK EYEGKWLLFD DSEVKVTEEK DFLNSLSPST bmy_09941T0/1-773 ---------- ---------- ---------- ---------- ---------- ENSP00000343526/1-785 TGINISGFEN KISYVVQSLK EYEGKWLLFD DSEVKVTEEK DFLNSLSPST BACU000205/1-480 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000013152/1-780 TGINMSGFEN KISYVVQSLK EYEGKWLLFD DSEVKVTEEK DFLNSLSPST 901 950 ENSBTAP00000027254/1-783 SPTSTPYLLF YKKL bmy_09941T0/1-773 ---------- ---- ENSP00000343526/1-785 SPTSTPYLLF YKKL BACU000205/1-480 ---------- ---- ENSTTRP00000013152/1-780 SPTSTPYLLF YKKL