KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:32:03 2014 Check: 00 .. Name: ENSTTRP00000011562/1-323 Len: 326 Check: 434 Weight: 1.00 Name: ENSP00000216468/1-325 Len: 326 Check: 3065 Weight: 1.00 Name: ENSBTAP00000027275/1-326 Len: 326 Check: 9025 Weight: 1.00 Name: bmy_03490T0/1-257 Len: 326 Check: 3765 Weight: 1.00 Name: BACU010843/1-257 Len: 326 Check: 3800 Weight: 1.00 // 1 50 ENSTTRP00000011562/1-323 MSDRRAAEGP GVWSPAARRG PAHGVGDGPG VEGSQAAASE NEDLEVTKVT ENSP00000216468/1-325 MSDLQAAEGP GSWSPTARPG SAGGVGDCQG VEGSQAAASE NEDLEN-KDT ENSBTAP00000027275/1-326 MSDPRAAEGP GVWSPAARRG PARGPGDSSG VEGSQAAASE DEDVENTKVT bmy_03490T0/1-257 ---------- ---------- ---------- ---------- ---------- BACU010843/1-257 ---------- ---------- ---------- ---------- ---------- 51 100 ENSTTRP00000011562/1-323 SLAASASDPE PHSSSYRPQM VSPVREDATE DQQKAASAME AQASVEQELL ENSP00000216468/1-325 SLLASATDPE PCSSPHRPQM VSPVSKDATE DLRKATGPLE AQALVKQDLL ENSBTAP00000027275/1-326 SVAASASDPE PDSSPYRSQM VSPVTEDATE DKQKAARAGE AQASVEQELL bmy_03490T0/1-257 ---------- ---------M VSPVREDATE DQQKAAGAME AQASVEQELL BACU010843/1-257 ---------- ---------M VSPVREDATE DQQKAAGAVE AQASVEQELL 101 150 ENSTTRP00000011562/1-323 SADQAQVLSK MAKYHGLPRS GDIVMIQSEH TGAVDILSAD LESADLLGDH ENSP00000216468/1-325 PADQAQVLNE MAKYQVPQRS GDIVMIQSEH TGAIDVLSAD LESADLLGDH ENSBTAP00000027275/1-326 SADQTQILSK MARYHGPQRS GDIVMIQSEH TGAVDILSAD LESADLLGDH bmy_03490T0/1-257 SADQAQVLSK MAKYHGLPRS GDIVMIQSEH TGAVDILSAD LESADLLGDH BACU010843/1-257 SADQAQVLSK MAKYHGLPRS GDIVMIQSEH TGAVDILSAD LESADLLGDH 151 200 ENSTTRP00000011562/1-323 RRVSPPLIAP PCIWT-AKMK EFKSKLGKEK NSRLVVKRGE -VTIRVPTHP ENSP00000216468/1-325 RKVSPPLMAP PCIWTFAKVK EFKSKLGKEK NSRLVVKRGE VVTIRVPTHP ENSBTAP00000027275/1-326 RRVSPPLMAP PCIWTFAKMK EFKSKLGKEK NSRLVVKRGE VVTIRVPTHP bmy_03490T0/1-257 RRVSPPLMAP PCIWTFAKMK EFKSKLGKEK NSRLVVKRGE VVTIRVPTHP BACU010843/1-257 RRVSPPLMAP PCIWTFAKMK EFKSKLGKEK NSRLVVKRGE VVTIRVPTHP 201 250 ENSTTRP00000011562/1-323 -GKRVCWEYA TDDYDIXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000216468/1-325 EGKRVCWEFA TDDYDIGFGV YFDWTPVTST DITVQVSDSS DDEDEEEEEE ENSBTAP00000027275/1-326 EGKRVCWEFA TDDYDIGFGV YFDWTPVTST DITVQVSDSS EDEDEDEEED bmy_03490T0/1-257 EGKRVCWEFA TDDYDIGFGV YFDWTPVTST DITVQVSDSS EDEDEDEEEE BACU010843/1-257 EGKRVCWEFA TDDYDIGFGV YFDWTPVTST DITVQVSDSS EDEDEDEEEE 251 300 ENSTTRP00000011562/1-323 XXXXXPVPAG DVERGSRSSL RGRYGEVMPV YRRDSHRDVQ AGSHDYPGEG ENSP00000216468/1-325 EEIEEPVPAG DVERGSRSSL RGRYGEVMPV YRRDSHRDVQ AGSHDYPGEG ENSBTAP00000027275/1-326 EELEDPVPAG DVERGSRSSL RGRYGEVMPV YRRDSHRDVQ AGSHDYPGEG bmy_03490T0/1-257 EETEDPVPAG DVERGSRSSL RGRYGEVMPV YRRDSHRDVQ AGSHDYPGEG BACU010843/1-257 EEIEDPVPAG DVERGSRSSL RGRYGEVMPV YRRDSHRDVQ AGSHDYPGEG 301 350 ENSTTRP00000011562/1-323 IYLLKFDNSY SLLRNKTLYF HIYYTS ENSP00000216468/1-325 IYLLKFDNSY SLLRNKTLYF HIYYTS ENSBTAP00000027275/1-326 IYLLKFDNSY SLLRNKTLYF HVYYTS bmy_03490T0/1-257 IYLLKFDNSY SLLRNKTLYF HIYYTS BACU010843/1-257 IYLLKFDNSY SLLRNKTLYF HIYYTS