KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:32:09 2014 Check: 00 .. Name: ENSBTAP00000027295/1-625 Len: 626 Check: 3030 Weight: 1.00 Name: ENSTTRP00000000509/1-626 Len: 626 Check: 6014 Weight: 1.00 Name: bmy_04337T0/1-608 Len: 626 Check: 7014 Weight: 1.00 Name: BACU006737/1-626 Len: 626 Check: 2381 Weight: 1.00 // 1 50 ENSBTAP00000027295/1-625 MVTPWRFSLR VCLAHLRGFA LRKEVGLLRH SGGCRKARLC WLLLGTLPKL ENSTTRP00000000509/1-626 MVTPWRFSVR VCLSHLRGLE LRKDLGLLRP SGCCRKARLC WLLLGTLPKL bmy_04337T0/1-608 MVTPWRFSVR VCLSHLRGLE LRKDLGLLRP SGCCRKARLC WLLLGTLPKL BACU006737/1-626 MVTPWRFSVR VCLSHLRGLE LRKDLGLLRP SGCCRKARLC WLLLGTLPKL 51 100 ENSBTAP00000027295/1-625 VSTCEDIGEG APESVRRQTT SWSDLAKNGP LERVPPEGRL GWLLLHVRIW ENSTTRP00000000509/1-626 ISASEDIGKG VPESLCRQRT SWSDLAENGP LERVPPEQRL GCLLLHLRIW bmy_04337T0/1-608 ISASEDIGKG APESLCRQRT SWSDLAENGP LETVPPERRL GCLLLHLRIW BACU006737/1-626 ISASEDIGKG APESSCRQRT SWSDLAENGP LERVPPERRL GCLLLHLRIW 101 150 ENSBTAP00000027295/1-625 LRAGALLVKF FPLLLLYPLT YLAPSVSSLW LHLLLKATET SGPTYIKLGQ ENSTTRP00000000509/1-626 LRAGALLVKF FPLLLLYPLT YLAPSVSRLW LHLLLKATET SGPTYIKLGQ bmy_04337T0/1-608 LRAGALLVKF FPLLLLYPLT YLAPSVSRLW LHLLLKATET SGPTYIKLGQ BACU006737/1-626 LRAGALLVKF FPLLLLYPLT YLAPSVSRLW LHLLLKATET SGPTYIKLGQ 151 200 ENSBTAP00000027295/1-625 WASTRRDLFS EAFCAQFSRL HVQVSPHPWT HTEHILRQAF GEDWGRVLCF ENSTTRP00000000509/1-626 WASTRRDLFS EAFCAQFSKL HVQVTPHPWT HTEHFLRQAF GEDWGRVLCF bmy_04337T0/1-608 WASTRRDLFS EAFCAQFSKL HVQVTPHPWT HTEHFLRQAF GEDWGRVLCF BACU006737/1-626 WASTRRDLFS EAFCAQFSKL HVQVTPHPWT HTEHFLRQAF GEDWGRVLCF 201 250 ENSBTAP00000027295/1-625 EKQEPVGSGC VAQVYKARAN PAFLENDSIQ RLATASILQF -SETGAAGGL ENSTTRP00000000509/1-626 EKQEPVGSGC VAQVYKARAN PAFLENDSIR RLATASRLQI SSEAGKVRGL bmy_04337T0/1-608 EKQEPVGSGC VAQVYKARAN PAFLENDSIR RLATASRLQL SSEAGKVQGL BACU006737/1-626 EKQEPVGSGC VAQVYKARAN PAFLENDSIR RLATASRLQL SSEAGKVRGL 251 300 ENSBTAP00000027295/1-625 GELSGRLEKA GRPQESLADQ SFVERLLFPK PDLVGSNASL SQASGTAHEQ ENSTTRP00000000509/1-626 GELLGHLGKA WRPQGSLADQ SFLEGLLFPK ADLVGSNAAL SQASGLAHGP bmy_04337T0/1-608 GELPGHLGKA WRPHGSLADQ SXLERLLFPK ADLVGSNAVL SQASGLPHGP BACU006737/1-626 GELPGHLGKA WRPHGSLADQ SFLERLLFPK ADLVGSNAVL SQASGLAHGP 301 350 ENSBTAP00000027295/1-625 EPDHLVPVAV KVLHPGLLAQ VQMDLLLMKM GSRVLTVLPG IKWLSLPEIV ENSTTRP00000000509/1-626 QPDHLIPVAV KVLHPGLLAQ VQMDLLLMKM GSRVLALLPG IKWLSLPEIV bmy_04337T0/1-608 QSDHLIPVAV KVLHPGLLAQ VQMDLLLMKM GSRVLALLPG IKWLSLPEIV BACU006737/1-626 QPDHLIPVAV KVLHPGLLAQ VQMDLLLMKM GSRVLALLPG IKWLSLPEIV 351 400 ENSBTAP00000027295/1-625 EEFEKLMVQQ IDLRYEARNL ELFQCNFLNV NSVKFPTPLR PFVTKDVLVE ENSTTRP00000000509/1-626 EEFEKLMVQQ IDLRYEARNL EHFQCNFLNV NSVKFPTPLR PFVTRDVLVE bmy_04337T0/1-608 EEFEKLMVQQ IDLRYEARNL EHFQCNFLNV NSVKFPTPLR PFVTRDVLVE BACU006737/1-626 EEFEKLMVQQ IDLRYEARNL EHFQCNFLNV NSVKFPTPLR PFVTRDVLVE 401 450 ENSBTAP00000027295/1-625 TYEESVPVSS YQHAGIPLDV KRKIARLGIN MLLKMIFVDN FVHADLHPGN ENSTTRP00000000509/1-626 TYEESVPVSS YQQAGIPGDV KRKIARLGIN MLLKMIFVDN FVHADLHPGN bmy_04337T0/1-608 TYEESVPVSS YQQAGIPVDV KRKIARLGIN MLLKMIFVDN FVHADLHPGN BACU006737/1-626 TYEESVPVSS YQQAGIPVDV KRKIARLGIN MLLKMIFVDN FVHADLHPGN 451 500 ENSBTAP00000027295/1-625 ILVQGADGLA QGPEARLQPV DVCEALVVAV SPARCPLRLV LLDAGIVAEL ENSTTRP00000000509/1-626 ILVQGADGLP KSQEAQPQQV DVCDALAVAV TPARCPLCLV LLDAGIVAEL bmy_04337T0/1-608 ILVQGADGLP KNQEAQPQQV DVCDALAVAV TPARCPLCLV LLDAGIVAEL BACU006737/1-626 ILVQGADGLP KSQEAQPQQV DVCDALAVAV TPARCPLCLV LLDAGIVAEL 501 550 ENSBTAP00000027295/1-625 QAADLRNFRA VFMAVAMGQG QRVAELILHH ARASECEDVE GFKAEMARLV ENSTTRP00000000509/1-626 QAADLRNFRE VFMAVVMGQG QRVAELILHH ARASECKDVE GFKAEMARLV bmy_04337T0/1-608 QAADLRNFRE VFMAVVMGQG QRVAELILHH ARASECKDVE GFKAEMARLV BACU006737/1-626 QAADLRNFRE VFMAVVMGQG QRVAELILHH ARASECKDVE GFKAEMARLV 551 600 ENSBTAP00000027295/1-625 TQARKNTITL EKLQVSSLLS NVFKLLMTHK VKLESNFASI VFAIMVLEGL ENSTTRP00000000509/1-626 TQARKNTITL EKXXXXXXXX XXXXXXXXXX VKLESNFASI VFAIMVLEGL bmy_04337T0/1-608 TQARKNTITL EK-------- ---------- VKLESNFASI VFAIMVLEGL BACU006737/1-626 TQARKNTITL EKLQVSILLS NVFKLLMTHK VKLESNFASI VFAIMVLEGL 601 650 ENSBTAP00000027295/1-625 GRSLDPKLDI LEAAKPFLLK GLVTSR ENSTTRP00000000509/1-626 GRSLDPKLDI LEAAKPFLLP GLATSR bmy_04337T0/1-608 GRSLDPKLDI LEAAKPFLLQ GLATSH BACU006737/1-626 GRSLDPKLDI LEAAKPFLLQ GLATSR