KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:32:10 2014 Check: 00 .. Name: bmy_01316T0/1-243 Len: 424 Check: 5033 Weight: 1.00 Name: ENSTTRP00000005535/1-417 Len: 424 Check: 8996 Weight: 1.00 Name: BACU019073/1-383 Len: 424 Check: 1024 Weight: 1.00 Name: ENSP00000409581/1-418 Len: 424 Check: 1460 Weight: 1.00 Name: ENSBTAP00000027296/1-418 Len: 424 Check: 1160 Weight: 1.00 // 1 50 bmy_01316T0/1-243 MPHPKGSAAL PAGALRQTCA SSGASPRAAA HALGGVCAAH PGPSLVPPA- ENSTTRP00000005535/1-417 -MGDKGTRVF KKASPNGKLT VYLGKRDFVD HI--DLVDPV DGVVLVDPEY BACU019073/1-383 ---------- ---------- ---------- --------PP DGVVLVDPEY ENSP00000409581/1-418 -MGDKGTRVF KKASPNGKLT VYLGKRDFVD HI--DLVDPV DGVVLVDPEY ENSBTAP00000027296/1-418 -MGDKGTRVF KKASPNGKLT VYLGKRDFVD HI--DLVEPV DGVVLVDPEY 51 100 bmy_01316T0/1-243 ---PTVYVTL TCAFRYGRED LDVLGLTFRK DLFVANVQSF PPAPEDKKPL ENSTTRP00000005535/1-417 LKERRVYVTL TCAFRYGRED LDVLGLTFRK DLFVANVQSF PPAPEDKKPL BACU019073/1-383 LKERRVYVTL TCAFRYGRED LDVLGLTFRK DLFVANVQSF PPAPEDKKPL ENSP00000409581/1-418 LKERRVYVTL TCAFRYGRED LDVLGLTFRK DLFVANVQSF PPAPEDKKPL ENSBTAP00000027296/1-418 LKERRVYVTL TCAFRYGRED LDVLGLTFRK DLFVANVQSF PPAPEDKKPL 101 150 bmy_01316T0/1-243 TRLQERLIKK LGEHAYPFTF EVRDCQPLGP HSRSITS-SK PSGQAYGGSW ENSTTRP00000005535/1-417 TRLQERLIKK LGEHAYPFTF EI---APNLP CSVTLQPGPE DTGKACGVDY BACU019073/1-383 TRLQERLIKK LGEHAYPFTF EI---PPNLP CSVTLQPGPE DTGKACGVDY ENSP00000409581/1-418 TRLQERLIKK LGEHAYPFTF EI---PPNLP CSVTLQPGPE DTGKACGVDY ENSBTAP00000027296/1-418 TRLQERLIKK LGEHAYPFTF EI---PPNLP CSVTLQPGPE DTGKACGVDY 151 200 bmy_01316T0/1-243 GSSSM----- ---------- ---------- ---PPSFPVY AGTRALALT- ENSTTRP00000005535/1-417 EVKAFCAENL EEKIHKRNSV RLIIRKVQYA PERPGPQPTA ETTRQFLMSD BACU019073/1-383 EVKAFCAENL EEKIHKRNSV RLVIRKVQYA PERPGPQPTA ETTRQFLMSD ENSP00000409581/1-418 EVKAFCAENL EEKIHKRNSV RLVIRKVQYA PERPGPQPTA ETTRQFLMSD ENSBTAP00000027296/1-418 EVKAFCAENL EEKIHKRNSV RLVIRKVQYA PERPGPQPTA ETTRQFLMSD 201 250 bmy_01316T0/1-243 ---------- ---------- ---------- ---------- ---LPGKCLW ENSTTRP00000005535/1-417 KPLHLEASLD KEIYYHGEPI SVNVHVTNNT NKTVKKIKIS VRQYADICLF BACU019073/1-383 KPLHLEASLD KEIYYHGEPI SVNVHVTNNT NKTVKKIKIS VRQYADICLF ENSP00000409581/1-418 KPLHLEASLD KEIYYHGEPI SVNVHVTNNT NKTVKKIKIS VRQYADICLF ENSBTAP00000027296/1-418 KPLHLEASLD KEIYYHGEPI SVNVHVTNNT NKTVKKIKIS VRQYADICLF 251 300 bmy_01316T0/1-243 PLPGA-SPLP LRYSPDLPES GS-------- ---------- ---------- ENSTTRP00000005535/1-417 NTAQYKCPVA MEEADDTVAP SSTFCKVYTL TPFLANNREK RGLALDGKLK BACU019073/1-383 NTAQYKCPVA MEEADDTVAP SSTFCKVYTL TPFLANNREK RGLALDGKLK ENSP00000409581/1-418 NTAQYKCPVA MEEADDTVAP SSTFCKVYTL TPFLANNREK RGLALDGKLK ENSBTAP00000027296/1-418 NTAQYKCPVA MEEADDTVAP SSTFCKVYTL TPFLANNREK RGLALDGKLK 301 350 bmy_01316T0/1-243 ---------- ---------- ---------- --LVGERGG- EGAAAEKEGA ENSTTRP00000005535/1-417 HEDTNLASST LLREGANREI LGIIVSYKVK VKLVVSRGGL LRGLFS-DVA BACU019073/1-383 HEDTNLASST LLREGANREI LGIIVSYKVK VKLVVSRGGL LGDLASSDVA ENSP00000409581/1-418 HEDTNLASST LLREGANREI LGIIVSYKVK VKLVVSRGGL LGDLASSDVA ENSBTAP00000027296/1-418 HEDTNLASST LLREGANREI LGIIVSYKVK VKLVVSRGGL LGDLASSDVA 351 400 bmy_01316T0/1-243 LSGPWV---- TTRLSPPSDR LP--TSPAST QLT------- ---------- ENSTTRP00000005535/1-417 VELPFTLMHP KPKEEPPHRE VPENEAPVDT NLIELDTTDD DIVFEDFARQ BACU019073/1-383 VELPFTLMHP KPKEEPLHRE VPENEAPVDT NLIELDTTDD DIVFEDFARQ ENSP00000409581/1-418 VELPFTLMHP KPKEEPPHRE VPENETPVDT NLIELDTNDD DIVFEDFARQ ENSBTAP00000027296/1-418 VELPFTLMHP KPKEEPPHRE VPEHETPVDT NLIELDTNDD DIVFEDFARQ 401 450 bmy_01316T0/1-243 ---------- -NENGK---- ---- ENSTTRP00000005535/1-417 RLKGMKDDKE EEEDGTGSPQ PNDR BACU019073/1-383 RLKGMKDDKE EEEDGTGSPQ LNDR ENSP00000409581/1-418 RLKGMKDDKE EEEDGTGSPQ LNNR ENSBTAP00000027296/1-418 RLKGMKDDKE EEEDGTGSPR LNDR