KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:32:10 2014 Check: 00 .. Name: ENSP00000360818/1-587 Len: 672 Check: 1610 Weight: 1.00 Name: bmy_19217T0/1-529 Len: 672 Check: 6979 Weight: 1.00 Name: ENSBTAP00000027302/1-585 Len: 672 Check: 1910 Weight: 1.00 Name: BACU016140/1-670 Len: 672 Check: 3667 Weight: 1.00 Name: ENSTTRP00000007028/1-418 Len: 672 Check: 1131 Weight: 1.00 // 1 50 ENSP00000360818/1-587 MSQMLHIEIP NFGNTVLGCL NEQRLLGLYC DVSIVVKGQA FKAHRAVLAA bmy_19217T0/1-529 MSQMLHIEIP NFGNTVLGCL NEQRLLGLYC DVSIVVKGQA FKAHRAVLAA ENSBTAP00000027302/1-585 MSQMLHIEIP NFGNTVLGCL NEQRLLGLYC DVSIVVKGQA FKAHRAVLAA BACU016140/1-670 MSQVLHIEIP NFGNTVLGCL NEQRLLGLYC DVSIVVKGQA FKAHRAVLAA ENSTTRP00000007028/1-418 MSQMLHIEIP NFGNTVLGCL NEQRLLGLYC DVSIVVKGQA FKAHRAVLAA 51 100 ENSP00000360818/1-587 SSLYFRDLFS GNSKSAFELP GSVPPACFQQ ILSFCYTGRL TMTASEQLVV bmy_19217T0/1-529 SSLYFRDLFS GNSKSAFELP GTVPPACFQQ ILSFCYTGRL TMAASEQLVV ENSBTAP00000027302/1-585 SSLYFRDLFS GNSKSAFELP GTVPPACFQQ ILSFCYTGRL TMAASEQLVV BACU016140/1-670 SSLYFRDLFS GNSKSAFELP GTVPPACFQQ ILSFCYTGRL TMAASEQLVV ENSTTRP00000007028/1-418 SSLYFRDLFS GNSKSAFELP GTVPPACFQQ ILSFCYTGRL TMAASEQLVV 101 150 ENSP00000360818/1-587 MYTAGFLQIQ HIVERGTDLM FKVSSPHCDS QTAVIEDAGS EPQSPCNQLQ bmy_19217T0/1-529 MYTAGFLQIQ HIVERGTDLM FKVSSPHCDS QTAVIEDASS EPQSPCNQLQ ENSBTAP00000027302/1-585 MYTAGFLQIQ HIVERGTDLM FKVSSPHCDS QTTMIEDASS EPQSPCNQLQ BACU016140/1-670 MYTAGFLQIQ HIVERGTDLM FKVSSPHCDS QTAMIEDASS EPQSPCNQLQ ENSTTRP00000007028/1-418 MYTAGFLQIQ HIVERGTDLM FKVSSPHCDS QTAMIEDASS EPQSPCNQLQ 151 200 ENSP00000360818/1-587 PAAAAAAPYV VSPSVPIPLL TRVKHEAMEL P-PAGPGLAP KRPLETGPRD bmy_19217T0/1-529 P-VTAAPPYV VSPSVPIPLL TRVKHEAMEL PLAAGPGLAP KRPLETGPRD ENSBTAP00000027302/1-585 P--AAAPPYV VSPSVPIPLL TRVKHEALEL PLAAGPGLAP KRPLETGPRD BACU016140/1-670 P-VAAAPPYV VSPSVPIPLL TRVKHEAMEL PLAAGPGLAP KRPLETGPRD ENSTTRP00000007028/1-418 P-VTAAPPYV VSPSVPIPLL TRVKHEAVEL PLAAGPGLAP KRPLETGARD 201 250 ENSP00000360818/1-587 GVAVAAGAAV AA-------- ---------- ---------- ---------- bmy_19217T0/1-529 GATVATGPAV AA-------- ---------- ---------- ---------- ENSBTAP00000027302/1-585 GAAVATGSAV AA-------- ---------- ---------- ---------- BACU016140/1-670 GATVATGPAV AAGPAPLQLP RVSSEPQSPC NQLQPVTATP PYIVSPSVPI ENSTTRP00000007028/1-418 GAAAATGPAV AA-------- ---------- ---------- ---------- 251 300 ENSP00000360818/1-587 ---------- ---------- ---------- ---------- -----GTAPL bmy_19217T0/1-529 ---------- ---------- ---------- ---------- -----GTAPL ENSBTAP00000027302/1-585 ---------- ---------- ---------- ---------- -----GTAPL BACU016140/1-670 PLLTRVKHEA MELPLASGPG LAPKCPLEMG PWDSVMVATG PAVAAGTAPL ENSTTRP00000007028/1-418 ---------- ---------- ---------- ---------- -----GTAPL 301 350 ENSP00000360818/1-587 KLPRVSYYGV PSLATLIPGI QQMPYPQGER TSPGASSLPT TDSPTSYHNE bmy_19217T0/1-529 KLPRVSYYGV PSLATLIPSI QQAQYCQGER TSPGASSLPA TDSPTSYHNE ENSBTAP00000027302/1-585 KLPRVSYYGV PSLATLIPSI QQAPYSQGER TSPGASSLPT TDSPTSYHNE BACU016140/1-670 KLPRVSYYGV PSLATLIPSI QQAQYSQGER TSPGASSLPT TDSPTSYHNE ENSTTRP00000007028/1-418 KLPRVSYYGV PSLATLIPSI QQAQYSQGER TSPGASSLPT TDSPTSYHNE 351 400 ENSP00000360818/1-587 EDEEDDEAYD TMVEEQYGQM YIKASGSYAV QEKPEPVPLE SRSCVLIRRD bmy_19217T0/1-529 EDEEDDEAYD TMAEEQYGHM YIKATGSYAV QEKPEPVPLE SRSCVLIRRD ENSBTAP00000027302/1-585 EDEEDDEAYD TMVEEQYGQM YIKATGSYAV QEKPEPVPLE SRSCVLIRRD BACU016140/1-670 EDEEDDEAYD TMVEEQYGQM YIKATGSYAV QEKPEPVPLE SRSCVLIRRD ENSTTRP00000007028/1-418 EDDEDDEAYD TMVEEQYGHM YVKAAGSYAV QEKPEPVPLE SRSCVLIRRD 401 450 ENSP00000360818/1-587 LVALPASLIS QIGYRCHPKL YSEGDPGEKL ELVAGSGVYI TRGQLMNCHL bmy_19217T0/1-529 LVALPASLIS QIG------- ---------- ---------- ---------- ENSBTAP00000027302/1-585 LVALPASLIS QIGYRCHPKL YSEGDPGEKL ELVAGSGVYI TRGQLMNCHL BACU016140/1-670 LVALPASLIS QIGYRCHPKL YSEGDPGEKL ELVAGSGVYI TRGQLMNCHL ENSTTRP00000007028/1-418 LVALPASLIS QIGYRCHPKL YSEGDPGEKL ELVAGSGVYI TRGQLMNCHL 451 500 ENSP00000360818/1-587 CAGVKHKVLL RRLLATFFDR NTLANSCGTG IRSSTSDPSR KPLDSRVLNA bmy_19217T0/1-529 ---------- ---------- NTLANSCGTG IRSSTSDPSR KPLDSRVLNA ENSBTAP00000027302/1-585 CAGVKHKVLL RRLLATFFDR NTLANSCGTG IRSSTSDPSR KPLDSRVLNA BACU016140/1-670 CAGVKHKVLL RRLLATFFDR NTLANSCGTG IRSSTSDPSR KPLDSRVLNA ENSTTRP00000007028/1-418 CAGVKHKVLL RRLLATFFDR NTLANSCGTG IRSSTSDPSR KPLDSRVLNA 501 550 ENSP00000360818/1-587 VKLYCQNFAP SFKESEMNVI AADMCTNARR VRKRWLPKIK SMLPEGVEMY bmy_19217T0/1-529 VKLYCQNFAP SFKESEMNVI AADMCTNARR VRKRWLPKIK SMLPEGVEMY ENSBTAP00000027302/1-585 VKLYCQNFAP SFKESEMNVI AADMCTNARR VRKRWLPKIK SMLPEGVEMY BACU016140/1-670 VKLYCQNFAP SFKESEMNVI AADMCTNARR VRKRWLPKIK SMLPEGVEMY ENSTTRP00000007028/1-418 VK-------- ---------- ---------- ---------- ---------- 551 600 ENSP00000360818/1-587 RTVMGSAAAS VPLDPEFPPA AAQVFEQRIY AERRGDAATI VALRTDAVNV bmy_19217T0/1-529 RTVMGSSAAS APLDPEFPPA TAQVFEQRIY AERRGDAASI VALRTDAVNV ENSBTAP00000027302/1-585 RTVMGSSAAG APLDPEFPPA AAQVFEQRIY AERRGEAAAI VALRTDAVNV BACU016140/1-670 RTVMGSSAAS APLDPEFPPA AAQVFEQRIY AERRGDAASI VALRTDAVNV ENSTTRP00000007028/1-418 ---------- ---------- ---------- ---------- ---------- 601 650 ENSP00000360818/1-587 DLSAAANPAF DAGEEVDGAG SVIQ-EVAAP EPLPADGQSP PQPFEQGGGG bmy_19217T0/1-529 DLGASTNPTF EAGSEADGAG SVVQ-EVAAP EPLPAEGQSP PQPFEQGSAS ENSBTAP00000027302/1-585 DLAASANPAF EAGEEADGAG SVIQ-EVAAP EPLPADGQSP PQPFEQGSAS BACU016140/1-670 DLGASTNPTF EAGSEADGAG PVVQEEVAAP ELLPAEGQSP PQPFEQGSAS ENSTTRP00000007028/1-418 ---------- ---------- ---------- ---------- ---------- 651 700 ENSP00000360818/1-587 PSRPQTPAAA ARRPEGTYAG TL bmy_19217T0/1-529 SSRPATP-AA GRRPEGPYAG TL ENSBTAP00000027302/1-585 SSRPATP-AP GRRPEGPYAG PL BACU016140/1-670 SSQPAML-AA ERRPEDPYAG TL ENSTTRP00000007028/1-418 ---------- ---------- --