KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:32:13 2014 Check: 00 .. Name: ENSP00000387361/1-1393 Len: 1398 Check: 4787 Weight: 1.00 Name: ENSBTAP00000027325/1-1395 Len: 1398 Check: 8052 Weight: 1.00 Name: bmy_01473T0/1-1365 Len: 1398 Check: 6941 Weight: 1.00 Name: BACU013653/1-1295 Len: 1398 Check: 2927 Weight: 1.00 Name: ENSTTRP00000015050/1-1392 Len: 1398 Check: 8958 Weight: 1.00 // 1 50 ENSP00000387361/1-1393 ---MVEPGQD LLLAALSESG ISPNDLFDID GGDAGLATPM PTPSVQQSVP ENSBTAP00000027325/1-1395 ---MVEPGQD LLLAALSESG ISPNDLFDID GGDAGLATPT PTPPIQQSVP bmy_01473T0/1-1365 MGTMVEPGQD LLLAALSESG ISPNDLFDID AGDAGLATPT PTPPVQQSVP BACU013653/1-1295 ---MVEPGQD LLLAALSESG ISPNDLFDID GGDAGLATPT PTPPIQQSVP ENSTTRP00000015050/1-1392 ---MVEPGQD LLLAALSESG ISPNDLFDID GGDAGLATPT PTPPVQQSVP 51 100 ENSP00000387361/1-1393 LSALELGLET EAAVPVKQEP ETVPTPALLN VRQQPPSTTT FVLNQINHLP ENSBTAP00000027325/1-1395 LSALELGLET EAAVPVKQEP ETVPTPALLN VRQQPPSTTT FVLNQINQLP bmy_01473T0/1-1365 LSALELGLET EAAVPVKQEP ETLPTPALLN VRQQPPSTTT FVLNQINQLP BACU013653/1-1295 LSALELGLET EAAVPVKQEP ETLPTPALLN VRQQPPSTTT FVLNQINQLP ENSTTRP00000015050/1-1392 LSALELGLET EAAVPVKQEP ETLPTPALLN VR-QPPSTTT FVLNQINQLP 101 150 ENSP00000387361/1-1393 PLGSTIVMTK TPPVTTNRQT ITLTKFIQTT ASTRPSVSAP TVRNAMTSAP ENSBTAP00000027325/1-1395 TLGSTIVMTK TPPVTTNRQT ITLTKFIQTT ANTRPSVSAP AVRNAMTSAP bmy_01473T0/1-1365 TLGSTIVMTK TPPVTTNRQT ITLTKFIQTT ANTRPSVSAP AARNAMTSAP BACU013653/1-1295 TLGSTIVMTK TPPVTTNRQT ITLTKFIQTT ANTRPSVSAP AARNAMTSAP ENSTTRP00000015050/1-1392 TLGSTIVMTK TPPVTTNRQT ITLTKFIQTT ANTRPSVSAP AARNAMTSAP 151 200 ENSP00000387361/1-1393 SKDQVQLKDL LKNNSLNELM KLKPPANIAQ PVATAATDVS NGTVKKESSN ENSBTAP00000027325/1-1395 SKDQVQLKDL LKNNSLNELM KLKPPANIAQ PVATAATDVS NGTVKKESSN bmy_01473T0/1-1365 SKDQVQLKDL LKNNSLNELM KLKPPANIAQ PVATAATDVS NGTVKKESSN BACU013653/1-1295 SKDQVQLKDL LKNNSLNELM KLKPPANIAQ PVATAATDVS NGTVKKESSN ENSTTRP00000015050/1-1392 SKDQVQLKDL LKNNSLNELM KLKPPANIAQ PVATAATDVS NGTVKKESSN 201 250 ENSP00000387361/1-1393 KEGARMWIND MKMRSFSPTM KVPVVKEDDE PEEEDEEEMG HAETYAEYMP ENSBTAP00000027325/1-1395 KEVARIWIND MKMRSFSPTM KVPVVKEEDE PEEEDEEEMG HAETYAEYMP bmy_01473T0/1-1365 KEVARIWIND MKMRSFSPTM KVPVVKEEDE PEEEDEEEMG HAETYAEYMP BACU013653/1-1295 KEVARIWIND MKMRSFSPTM KVPVVKEEDE PEEEDEEEMG HAETYAEYMP ENSTTRP00000015050/1-1392 KEVARIWIND MKMRSFSPTM KVPVVKEEDE PEEEDEEEMG HAETYAEYMP 251 300 ENSP00000387361/1-1393 IKLKIGLRHP DAVVETSSLS SVTPPDVWYK TSISEETIDN GWLSALQLEA ENSBTAP00000027325/1-1395 IKLKIGLRHP DAVVETSSLS SVTPPDVWYK TSISEETIDN GWLSALQLEA bmy_01473T0/1-1365 IKLKIGLRHP DAVVETSSLS SVTPPDVWYK TSISEETIDN GWLSALQLEA BACU013653/1-1295 IKLKIGLRHP DAVVETSSLS SVTPPDVWYK TSISEETIDN GWLSALQLEA ENSTTRP00000015050/1-1392 IKLKIGLRHP DAVVETSSLS SVTPPDVWYK TSISEETIDN GWLSALQLEA 301 350 ENSP00000387361/1-1393 ITYAAQQHET FLPNGDRAGF LIGDGAGVGK GRTIAGIIYE NYLLSRKRAL ENSBTAP00000027325/1-1395 ITYAAQQHET FLPNGDRAGF LIGDGAGVGK GRTIAGIIYE NYLLSRKRAL bmy_01473T0/1-1365 ITYAAQQHET FLPNGDRAGF LIGDGAGVGK GRTIAGIIYE NYLLSRKRAL BACU013653/1-1295 ITYAAQQHET FLPNGDRAGF LIGDGAGVGK GRTIAGIIYE NYLLSRKRAL ENSTTRP00000015050/1-1392 ITYAAQQHET FLPNGDRAGF LIGDGAGVGK GRTIAGIIYE NYLLSRKRAL 351 400 ENSP00000387361/1-1393 WFSVSNDLKY DAERDLRDIG AKNILVHSLN KFKYGKISSK HNGSVKKGVI ENSBTAP00000027325/1-1395 WFSVSNDLKY DAERDLRDIG AKNILVHSLN KFKYGKISSK HNGSVKKGVI bmy_01473T0/1-1365 WFSVSNDLKY DAERDLRDIG AKNIL----- -FKYGKISSK HNGSVKKGVI BACU013653/1-1295 WFSVSNDLKY DAERDLRDIG AKNILVHSLN K--------- ---------- ENSTTRP00000015050/1-1392 WFSVSNDLKY DAERDLRDIG AKNILVHSLN KXXXXXXXXX XXXXXXXXXX 401 450 ENSP00000387361/1-1393 FATYSSLIGE SQSGGKYKTR LKQLLHWCGD DFDGVIVFDE CHKAKNLCPV ENSBTAP00000027325/1-1395 FATYSSLIGE SQSGGKYKTR LKQLLHWCGD DFDGVIVFDE CHKAKNLCPV bmy_01473T0/1-1365 FATYSSLIGE SQSGGKYKTR LKQLLHWCGD DFDGVIVFDE CHKAKNLCPV BACU013653/1-1295 ---------- ---------- ---------- -----IVFDE CHKAKNLCPV ENSTTRP00000015050/1-1392 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXIVFDE CHKAKNLCPV 451 500 ENSP00000387361/1-1393 GSSKPTKTGL AVLELQNKLP KARVVYASAT GASEPRNMAY MNRLGIWGEG ENSBTAP00000027325/1-1395 GSSKPTKTGL AVLELQNKLP KARVVYASAT GASEPRNMAY MNRLGIWGEG bmy_01473T0/1-1365 GSSKPTKTGL AVLELQNKLP KARVVYASAT GASEPRNMAY MNRLGIWGEG BACU013653/1-1295 GSSKPTKTGL AVLELQNKLP KARVVYASAT GASEPRNMAY MNRLGIWGEG ENSTTRP00000015050/1-1392 GSSKPTKTGL AVLELQNKLP KARVVYASAT GASEPRNMAY MNRLGIWGEG 501 550 ENSP00000387361/1-1393 TPFREFSDFI QAVERRGVGA MEIVAMDMKL RGMYIARQLS FTGVTFKIEE ENSBTAP00000027325/1-1395 TPFREFSDFI QAVERRGVGA MEIVAMDMKL RGMYIARQLS FTGVTFKIEE bmy_01473T0/1-1365 TPFREFSDFI QAVERRGVGA MEIVAMDMKL RGMYIARQLS FTGVTFKIEE BACU013653/1-1295 TPFREFSDFI QAVERRGVGA MEIVAMDMKL RGMYIARQLS FTGVTFKIEE ENSTTRP00000015050/1-1392 TPFREFSDFI QAVERRGVGA MEIVAMDMKL RGMYIARQLS FTGVTFKIEE 551 600 ENSP00000387361/1-1393 VLLSQSYVKM YNKAVKLWVI ARERFQQAAD LIDAEQRMKK SMWGQFWSAH ENSBTAP00000027325/1-1395 VLLSQSYVKM YNKAVKLWVI ARERFQQAAD LIDAEQRMKK SMWGQFWSAH bmy_01473T0/1-1365 VLLSQSYVKM YNKAVKLWVI ARERFQQAAD LIDAEQRMKK SMWGQFWSAH BACU013653/1-1295 VLLSQSYVKM YNKAVKLWVI ARERFQQAAD LIDAEQRMKK SMWGQFWSAH ENSTTRP00000015050/1-1392 VLLSQSYVKM YNKAVKLWVI ARERFQQAAD LIDAEQRMKK SMWGQFWSAH 601 650 ENSP00000387361/1-1393 QRFFKYLCIA SKVKRVVQLA REEIKNGKCV VIGLQSTGEA RTLEALEEGG ENSBTAP00000027325/1-1395 QRFFKYLCIA SKVKRVVQLA REEIKNGKCV VIGLQSTGEA RTLEALEEGG bmy_01473T0/1-1365 QRFFKYLCIA SKVKRVVQLA REEIKNGKCV VIGLQSTGEA RTLEALEEGG BACU013653/1-1295 QRFFKYLCIA SKVKRVVQLA REEIKNGKCV VIGLQSTGEA RTLEALEEGG ENSTTRP00000015050/1-1392 QRFFKYLCIA SKVKRVVQLA REEIKNGKCV VIGLQSTGEA RTLEALEEGG 651 700 ENSP00000387361/1-1393 GELNDFVSTA K--GVLQSLI EKHFPAPDRK KLYSLLGIDL TAPSNNSSPR ENSBTAP00000027325/1-1395 GELNDFVSTA KNRGVLQSLI EKHFPAPDRK KLYSLLGIDL TAPSNSSSPR bmy_01473T0/1-1365 GELNDFVSTA K--GVLQSLI EKHFPAPDRK KLYSLLGIDL TAPSNNSSPR BACU013653/1-1295 GELNDFVSTA K--GVLQSLI EKHFPAPDRK KLYSLLGIDL TAPSNNSSPR ENSTTRP00000015050/1-1392 GELNDFVSTA K--GVLQSLI EKHFPAPDRK KLYSLLGIDL TAPSNNSSPR 701 750 ENSP00000387361/1-1393 DSPCKENKIK KRKGEEITRE AKKARKVGGL TGSSSDDSGS ESDASDNEES ENSBTAP00000027325/1-1395 DSPCKENKTK KRKGEEITRE AKKARKIGGL TGSSSDDSGS ESDASDNEES bmy_01473T0/1-1365 DSPCKENKIK KRKGEEITRE SKKARKIGGL TGSSSDDSGS ESDASDNEES BACU013653/1-1295 DSPCKENKIK KRKGEEITRE SKKARKIGGL TGSSSDDSGS ESDASDNEES ENSTTRP00000015050/1-1392 DSPCKENKIK KRKGEEITRE SKKARKIGGL TGSSSDDSGS ESDASDNEES 751 800 ENSP00000387361/1-1393 DYESSKNMSS GDDDDFNPFL DESNEDDEND PWLIRKDHKK NKEKKKKKSI ENSBTAP00000027325/1-1395 DYESSKNMSS GDDDDFNPFR DESSEDDEDD PWLIRKDHKK NKDKKKRKSI bmy_01473T0/1-1365 DYESSKNMSS GDDDDFNPFR DESSEDDEDD PWLIRKDHKK NKDKKKKRSI BACU013653/1-1295 DYESSKNMSS GDDDDFNPFR DESSEDDEDD PWLIRKDHKK NKDKKKKRSI ENSTTRP00000015050/1-1392 DYESSKNMSS GDDDDFNPFR DESSEDDEDD PWLIRKDHKK NKDKKKKRSI 801 850 ENSP00000387361/1-1393 DPDSIQSALL ASGLGSKRPS FSSTPVISPA PNSTPANSNT NSNSSLITSQ ENSBTAP00000027325/1-1395 DPDSIQSALL ASGLGSKRPS FSSTPVISPA PNSAPANSNT NSNSSLITSQ bmy_01473T0/1-1365 DPDSIQSALL ASGLGSKRPS FSSTPVISPA PNSAPANSNT NSNNSLITSQ BACU013653/1-1295 DPDSIQSALL ASGLGSKRPS FSSTPVISPA PNSAPANSNT NSNNSLITSQ ENSTTRP00000015050/1-1392 DPDSIQSALL ASGLGSKRPS FSSTPVISPA PNSAPANSNT NSNNSLITSQ 851 900 ENSP00000387361/1-1393 DAVERAQQMK KDLLDKLEKL AEDLPPNTLD ELIDELGGPE NVAEMTGRKG ENSBTAP00000027325/1-1395 DAVERAQQMK KDLLDKLEKL AEDLPPNTLD ELIDELGGPE NVAEMTGRKG bmy_01473T0/1-1365 DAVERAQQMK KDLLDKLEKL AEDLPPNTLD ELIDELGGPE NVAEMTGRKG BACU013653/1-1295 DAVERAQQMK KDLLDKLEKL AEDLPPNTLD ELIDELGGPE NVAEMTGRKG ENSTTRP00000015050/1-1392 DAVERAQQMK KDLLDKLEKL AEDLPPNTLD ELIDELGGPE NVAEMTGRKG 901 950 ENSP00000387361/1-1393 RVVSNDDGSI SYESRSELDV PVEILNITEK QRFMDGDKNI AIISEAASSG ENSBTAP00000027325/1-1395 RVVSNDDGSI SYESRSELDV PVEILNITEK QRFMDGDKNI AIISEAASSG bmy_01473T0/1-1365 RVVSNDDGSI SYESRSELDV PVEILNITEK QRFMDGDKNI AIISEAASSG BACU013653/1-1295 RVVSNDDGSI SYESRSELDV PVEILNITEK QRFMDGDKNI AIISEAASSG ENSTTRP00000015050/1-1392 RVVSNDDGSI SYESRSELDV PVEILNITEK QRFMDGDKNI AIISEAASSG 951 1000 ENSP00000387361/1-1393 ISLQADRRAK NQRRRVHMTL ELPWSADRAI QQFGRTHRSN QVTAPEYVFL ENSBTAP00000027325/1-1395 ISLQADRRAK NQRRRVHMTL ELPWSADRAI QQFGRTHRSN QVTAPEYVFL bmy_01473T0/1-1365 ISLQADRRAK NQRRRVHMTL ELPWSADRAI QQFGRTHRSN QVTAPEYVFL BACU013653/1-1295 ISLQADRRAK NQRRRVHMTL ELPWSADRAI QQFGRTHRSN QVTAPEYVFL ENSTTRP00000015050/1-1392 ISLQADRRAK NQRRRVHMTL ELPWSADRAI QQFGRTHRSN QVTAPEYVFL 1001 1050 ENSP00000387361/1-1393 ISELAGEQRF ASIVAKRLES LGALTHGDRR ATESRDLSRF NFDNKYGRNA ENSBTAP00000027325/1-1395 ISELAGEQRF ASIVAKRLES LGALTHGDRR ATESRDLSRF NFDNKYGRNA bmy_01473T0/1-1365 ISELAGEQRF ASIVAKRLES LGALTHGDRR ATESRDLSRF NFDNKYGRNA BACU013653/1-1295 ISELAGEQRF ASIVAKRLES LGALTHGDRR ATESRDLSRF NFDNKYGRNA ENSTTRP00000015050/1-1392 ISELAGEQRF ASIVAKRLES LGALTHGDRR ATESRDLSRF NFDNKYGRNA 1051 1100 ENSP00000387361/1-1393 LEIVMKSIVN LDSPMVSPPP DYPGEFFKDV RQGLIGVGLI NVEDRSGILT ENSBTAP00000027325/1-1395 LEIVMKSIVN LDSPMVSPPP DYPGEFFKDV RQGLIGVGLI NVEDRSGILT bmy_01473T0/1-1365 LEIVMKSIVN LDSPMVSPPP DYPGEFF--- ---------- ---------- BACU013653/1-1295 LEIVMKSIVN LDSPMVSPPP DYPGEFFKDV RQGLIGVGLI NVEDRSGILT ENSTTRP00000015050/1-1392 LEIVMKSIVN LDSPMVSPPP DYPGEFFKDV RQGLIGVGLI NVEDRSGILT 1101 1150 ENSP00000387361/1-1393 LDKDYNNIGK FLNRILGMEV HQQNALFQYF ADTLTAVVQN AKKNGRYDMG ENSBTAP00000027325/1-1395 LDKDYNNIGK FLNRILGMEV HQQNALFQYF ADTLTAVVQN AKKNGRYDMG bmy_01473T0/1-1365 --KDYNNIGK FLNRILGMEV HQQNALFQYF ADTLTAVVQN AKKNGRYDMG BACU013653/1-1295 LDKDYNNIGK FLNRILGMEV HQQNALFQYF ADTLTAVVQN AKKNGRYDMG ENSTTRP00000015050/1-1392 LDKDYNNIGK FLNRILGMEV HQQNALFQYF ADTLTAVVQN AKKNGRYDMG 1151 1200 ENSP00000387361/1-1393 ILDLGSGDEK VRKSDVKKFL TPGYSTSGHV ELYTISVERG MSWEEATKIW ENSBTAP00000027325/1-1395 ILDLGSGDEK VRKSDVKKFL TPGYSTSGHV ELYTISVERG MSWEEATKIW bmy_01473T0/1-1365 ILDLGSGDEK VRKSDVKKFL TPGYSTSGHV ELYTISVERG MSWEEATKIW BACU013653/1-1295 ILDLGSGDEK VRKSDVKKFL TPGYSTSGHV ELYTISVERG MSWEEATKIW ENSTTRP00000015050/1-1392 ILDLGSGDEK VRKSDVKKFL TPGYSTSGHV ELYTISVERG MSWEEATKIW 1201 1250 ENSP00000387361/1-1393 AELTGPDDGF YLSLQIRNNK KTAILVKEVN PKKKLFLVYR PNTGKQLKLE ENSBTAP00000027325/1-1395 AELTGPDDGF YLSLQIRNNK KTAILVKEVN PKKKLFLVYR PNTGKQLKLE bmy_01473T0/1-1365 AELTGPDDGF YLSLQIRNNK KTAILVKEVN PKKKLFLVYR PNTGKQLKLE BACU013653/1-1295 AELTGPDDGF YLSLQIRNNK KTAILVKEVN PKKKLFLVYR PNTGKQLKLE ENSTTRP00000015050/1-1392 AELTGPDDGF YLSLQIRNNK KTAILVKEVN PKKKLFLVYR PNTGKQLKLE 1251 1300 ENSP00000387361/1-1393 IYADLKKKYK KVVSDDALMH WLDQYNSSAD TCTHAYWRGN CKKASLGLVC ENSBTAP00000027325/1-1395 IYADLKKKYK KVVSDDAVVH WLDQYNSSAD TCTHAYWRGN CKKASLGLVC bmy_01473T0/1-1365 IYADLKKKYK KVVSDDALVH WLDQYNSSAD TCTHAYWRGN CKKTSLGLVC BACU013653/1-1295 IYADLKKKYK KVVSDDALVH WLDQYNSSAD TCTHAY---- ---------- ENSTTRP00000015050/1-1392 IYADLKKKYK KVVSDDALVH WLDQYNSSAD TCTHAYWRGN CKKASLGLVC 1301 1350 ENSP00000387361/1-1393 EIGLRCRTYY VLCGSVLSVW TKVEGVLASV SGTNVKMQIV RLRTEDGQRI ENSBTAP00000027325/1-1395 EIGLRCRTYY VLCGSVLSVW TKVEGVLASV SGTNVKMQIV RLRTEDGQRI bmy_01473T0/1-1365 EIGLRCRTYY VLCGSVLSVW TKVEGVLASV SGTNVKMQIV RLRTEDGQRI BACU013653/1-1295 ---------- ---------- ---------- CGTNVKMQIV RLRTEDGQRI ENSTTRP00000015050/1-1392 EIGLRCRTYY VLCGSVLSVW TKVEGVLASV SGTNVKMQIV RLRTEDGQRI 1351 1400 ENSP00000387361/1-1393 VGLIIPANCV SPLVNLLSTS DQSQQLAVQQ KQLWQQHHPQ SITNLSNA ENSBTAP00000027325/1-1395 VGLIIPANCV SPLINLLSTS DQSQQLAVQQ KQLWQQRHPQ SIASLSST bmy_01473T0/1-1365 VGLIIPANCV SPLINLLSTS DQSQQLAVQQ KQLWQQRHPQ SIANLSNT BACU013653/1-1295 VGLIIPANCV SPLINLLSTS DQSQQLAVQQ KQLWQQRHPQ SIANLSNT ENSTTRP00000015050/1-1392 VGLIIPANCV SPLINLLSTS DQSQQLAVQQ KQLWQQRHPQ SIANLSNA