KEY:
ENSP* - Homo sapiens (Human)
ENSBTA* - Bos taurus (Cow)
ENSTTR* - Tursiops truncatus (Dolphin)
bmy_* - Balaena mysticetus (Bowhead whale)
BACU* - Balaenoptera acutorostrata (Minke whale)
Copy from below the line for a valid .msf file.
----------------------------------------------------------------------------------
NoName MSF: 5 Type: P Thu May 15 17:32:18 2014 Check: 00 ..
Name: ENSP00000243776/1-775 Len: 828 Check: 6875 Weight: 1.00
Name: ENSBTAP00000027366/1-775 Len: 828 Check: 5545 Weight: 1.00
Name: BACU012730/1-775 Len: 828 Check: 7853 Weight: 1.00
Name: bmy_13390T0/1-828 Len: 828 Check: 2255 Weight: 1.00
Name: ENSTTRP00000011093/1-775 Len: 828 Check: 6471 Weight: 1.00
//
1 50
ENSP00000243776/1-775 ---------- ---------- ---------- ---------- ----------
ENSBTAP00000027366/1-775 ---------- ---------- ---------- ---------- ----------
BACU012730/1-775 ---------- ---------- ---------- ---------- ----------
bmy_13390T0/1-828 ERGAGDSARR GGRGARPLGS GPPDPPPPRS RPLEASSCCS GAAPGPGARG
ENSTTRP00000011093/1-775 ---------- ---------- ---------- ---------- ----------
51 100
ENSP00000243776/1-775 ---MRASLLL SVLRPAGPVA VGISLGFTLS LLSVTWVEEP CGPGPPQPGD
ENSBTAP00000027366/1-775 ---MRASLLL SVLRPAGPVA VGISLGFTLS LLSVTWVEEP CGPGPPQPGD
BACU012730/1-775 ---MRASLLL SVLRPAGPVA VGISLGFTLS LLSVTWVEEP CGPGPPQPGD
bmy_13390T0/1-828 PGAMRASLLL SVLRPAGPVA VGISLGFTLS LLSVTWVEEP CGPGPPQPGD
ENSTTRP00000011093/1-775 ---MRASLLL SVLRPAGPVA VGISLGFTLS LLSVTWVEEP CGPGPPQPGD
101 150
ENSP00000243776/1-775 SELPPRGNTN AARRPNSVQP GAEREKPGAG EGAGENWEPR VLPYHPAQPG
ENSBTAP00000027366/1-775 SELPPRGNTN AARRPNSVQP GAERERPGAG AGAGENWEPR VLPYHPAQPG
BACU012730/1-775 SELPPRGNTN AARRPNSVQP GAERERPGAG AGAGDNWEPR VLPYHPAQPG
bmy_13390T0/1-828 SELPPRGNTN AARRPNSVQP GAERERPGAG AGAGENWEPR VLPYHPAQPG
ENSTTRP00000011093/1-775 SELPPRGNTN AARRPNSVQP GAERERPGAG AGAGENWEPR VLPYHPAQPG
151 200
ENSP00000243776/1-775 QAAKKAVRTR YISTELGIRQ RLLVAVLTSQ TTLPTLGVAV NRTLGHRLER
ENSBTAP00000027366/1-775 QAAKKAVRTR YISTELGIRQ KLLVAVLTSQ ATLPTLGVAV NRTLGHRLER
BACU012730/1-775 QAAKKAVRTR YISTELGIRQ RLLVAVLTSQ ATLPTLGVAV NRTLGHRLER
bmy_13390T0/1-828 QAAKKAVRTR YISTELGIRQ RLLVAVLTSQ ATLPTLGVAV NRTLGHRLER
ENSTTRP00000011093/1-775 QAAKKAVRTR YISTELGIRQ RLLVAVLTSQ ATLPTLGVAV NRTLGHRLER
201 250
ENSP00000243776/1-775 VVFLTGARGR RAPPGMAVVT LGEERPIGHL HLALRHLLEQ HGDDFDWFFL
ENSBTAP00000027366/1-775 VVFLTGSRGR RAPPGMAVVT LGEERPIGHL HLALRHLLEQ HGDDFDWFFL
BACU012730/1-775 VVFLTGSRGR RAPPGMAVVT LGEERPIGHL HLALRHLLEQ HGNDFDWFFL
bmy_13390T0/1-828 VVFLTGSRGR RAPPGMAVVT LGEERPIGHL HLALRHLLEQ HGNDFDWFFL
ENSTTRP00000011093/1-775 VVFLTGSRGR RAPSGMAVVT LGEERPIGHL HLALRHLLEQ HGNDFDWFFL
251 300
ENSP00000243776/1-775 VPDTTYTEAH GLARLTGHLS LASAAHLYLG RPQDFIGGEP TPGRYCHGGF
ENSBTAP00000027366/1-775 VPDATYTEAH GLARLVGRLS LAAAAHLYLG RPQDFIGGEP APGRYCHGGF
BACU012730/1-775 VPDATYTEAH GLAGLAGHLS LAAAAHLYLG RPQDFISGEP APGRYCHGGF
bmy_13390T0/1-828 VPDATYTEAH GLARLAGHLS LAAAAHLYLG RPQDFISGEP APGRYCHGGF
ENSTTRP00000011093/1-775 VPDATYTEAH GLARLAGHLS LAAAAHLYLG RPQDFISGEP APGRYCHGGF
301 350
ENSP00000243776/1-775 GVLLSRMLLQ QLRPHLEGCR NDIVSARPDE WLGRCILDAT GVGCTGDHEG
ENSBTAP00000027366/1-775 GVLLSRTLLQ QLRPHLEACR NDIVSARPDE WLGRCILDAT GVSCTGDHEG
BACU012730/1-775 GVLLSRTLLQ QLRPHLEACR NDIVSAHPDE WLGRCILDAT GVGCTGGHEG
bmy_13390T0/1-828 GVLLSRTLLQ QLRPHLEACR NDIVSAHPDE WLGRCILDAT GVGCTGGHEG
ENSTTRP00000011093/1-775 GVLLSRTLLQ QLRPHLEACR NDIVSAHPDE WLGRCILDAT GVGCTGGHEG
351 400
ENSP00000243776/1-775 VHYSHLELSP GEPVQEGDPH FRSALTAHPV RDPVHMYQLH KAFARAELER
ENSBTAP00000027366/1-775 VHYSYLELSP GEPVQEGDPR FRSALTAHPV HDPVHMYQLH KAFARAELER
BACU012730/1-775 VHYSYLELSP GEPVQEGDPR FRSALTAHPV RDPVHMYQLH KAFARAELER
bmy_13390T0/1-828 VHYSYLELSP GEPVQEGDPR FRSALTAHPV RDPVHMYQLH KAFARAELER
ENSTTRP00000011093/1-775 VHYSYLELSP GEPVQEGDPR FRSALTAHPV RDPVHMYQLH KAFARAELER
401 450
ENSP00000243776/1-775 TYQEIQELQW EIQNTSHLAV DGDQAAAWPV GIPAPSRPAS RFEVLRWDYF
ENSBTAP00000027366/1-775 TYQEIQELQW EIQNTSRLAA DGERAAAWPV GIPAPSRPAS RFEVLRWDYF
BACU012730/1-775 TYQEIQELQW EIQNTSRLAA DGERAATWPV GIPAPSRPAS RFEVLRWDYF
bmy_13390T0/1-828 TYQEIQELQW EIQNTSRLAA DGERAATWPV GIPAPSRPAS RFEVLRWDYF
ENSTTRP00000011093/1-775 TYQEIQELQW EIQNTSRLAA DGEWAATWPV GIPAPSRPAS RFEVLRWDYF
451 500
ENSP00000243776/1-775 TEQHAFSCAD GSPRCPLRGA DRADVADVLG TALEELNRRY HPALRLQKQQ
ENSBTAP00000027366/1-775 TEQHAFSCAD GSPRCPLRGA DRADVADVLG AALEELNRRY HPALRLQKQQ
BACU012730/1-775 TEQHAFSCAD GSPRCPLRGA DQADVADVLG AALEELNRRY HPALRLQKQQ
bmy_13390T0/1-828 TEQHAFSCAD GSPRCPLRGA DQADVADVLG AALEELNRRY HPALRLQKQQ
ENSTTRP00000011093/1-775 TEQHAFSCAD GSPRCPLRGA DQADVANVLG AALEELNRRY HPALRLQKQQ
501 550
ENSP00000243776/1-775 LVNGYRRFDP ARGMEYTLDL QLEALTPQGG RRPLTRRVQL LRPLSRVEIL
ENSBTAP00000027366/1-775 LVNGYRRFDP ARGMEYTLDL QLEALTPQGG RRPLTRRVQL LRPLSRVEIL
BACU012730/1-775 LVNGYRRFDP ARGMEYTLDL QLEALTPQGG RRPLTRRVQL LRPLSRVEIL
bmy_13390T0/1-828 LVNGYRRFDP ARGMEYTLDL QLEALTPQGG RRPLTRRVQL LRPLSRVEIL
ENSTTRP00000011093/1-775 LVNGYRRFDP ARGMEYTLDL QLEALTPQGG RRPLTRRVQL LRPLSRVEIL
551 600
ENSP00000243776/1-775 PVPYVTEASR LTVLLPLAAA ERDLAPGFLE AFATAALEPG DAAAALTLLL
ENSBTAP00000027366/1-775 PVPYVTEASR LTVLLPLAAA ERDLAPAFLE AFATAALEPG DAAAALTLLL
BACU012730/1-775 PVPYVTEASR LTVLLPLAAA ECDLAPGFLE AFAVAALEPG DSAATLTLLL
bmy_13390T0/1-828 PVPYVTEASR LTVLLPLAAA ECDLAPGFLE AFAVAALEPG DSAATLTLLL
ENSTTRP00000011093/1-775 PVPYVTEASR LTVLLPLAAA ECDLAPGFLE AFAVAALEPG DSAATLTLLL
601 650
ENSP00000243776/1-775 LYEPRQAQRV AHADVFAPVK AHVAELERRF PGARVPWLSV QTAAPSPLRL
ENSBTAP00000027366/1-775 LYEPRQAQRA AHADVFAPVK AHVAELERRF PGARVPWLSV QTAAPSPLRL
BACU012730/1-775 LYEPRQAQRA AHADVFAPVK ARVAELERRF PGARVPWLSV QTATPSPLRL
bmy_13390T0/1-828 LYEPRQAQRA AHADVFAPVK ARVAELERRF PGARVPWLSV QTATPSPLRL
ENSTTRP00000011093/1-775 LYEPRQAQRA AHADVFAPVK ARVAELERRF PGARVPWLSV QTATPSPLRL
651 700
ENSP00000243776/1-775 MDLLSKKHPL DTLFLLAGPD TVLTPDFLNR CRMHAISGWQ AFFPMHFQAF
ENSBTAP00000027366/1-775 MDLLSKKHPL DTLFLLAGPD TVLTPDFLNR CRMHAISGWQ AFFPMHFQAF
BACU012730/1-775 MDLLSKKHPL DTLFLLAGPD TVLTPDXXXX CRMHAISGWQ AFFPMHFQAF
bmy_13390T0/1-828 MDLLSKKHPL DTLFLLAGPD TVLTPDFLNR CRMHAISGWQ AFFPMHFQAF
ENSTTRP00000011093/1-775 MDLLSKKHPL DTLFLLAGPD TVLTPDFLNR CRMHAISGWQ AFFPMHFQAF
701 750
ENSP00000243776/1-775 HPAVAPPQGP GPPELGRDTG RFDRQAASEA CFYNSDYVAA RGRLAAASEQ
ENSBTAP00000027366/1-775 HPAVAPPQGP GPPELGRDTG RFDRQAATET CFYNSDYVAA RARLAASSDQ
BACU012730/1-775 HPALAPPQGP GPPELGRDTG RFDRQAASEA CFYNSDYVAA RARLAAASEQ
bmy_13390T0/1-828 HPAVAPPQGP GPPELGRDTG RFDRQAASEA CFYNSDYVAA RARLAAASEQ
ENSTTRP00000011093/1-775 HPAVAPPQGP GPPELGRDTG RFDRQAANEA CFYNSDYVAA RARLAAASEQ
751 800
ENSP00000243776/1-775 EEELLESLDV YELFLHFSSL HVLRAVEPAL LQRYRAQTCS ARLSEDLYHR
ENSBTAP00000027366/1-775 EEELMESLDV YELFLRFSSL HVLRAVEPAL LQHYRAQTCS ARLSEDLYHR
BACU012730/1-775 EEELLESLDV YELFLRFSSL HVLRAVEPAL LQRYRAQTCS ARLSEDLYHR
bmy_13390T0/1-828 EEELLESLDV YELFLRFSSL HVLRAVEPAL LQRYRAQTCS ARLSEDLYHR
ENSTTRP00000011093/1-775 EEELLESLDV YELFLRFSSL HVLRAVEPAL LQRYRAQTCS ARLSEDLYHR
801 850
ENSP00000243776/1-775 CLQSVLEGLG SRTQLAMLLF EQEQGNST
ENSBTAP00000027366/1-775 CRQSALESLG SRTQLAMLLF EQEQGNST
BACU012730/1-775 CRQSALESLG SRTQLAMLLF EQEQGNST
bmy_13390T0/1-828 CRQSALESLG SRTQLAMLLF EQEQGNST
ENSTTRP00000011093/1-775 CRQSALEGLG SRTQLAMLLF EQEQGNST