KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:32:20 2014 Check: 00 .. Name: ENSBTAP00000027374/1-502 Len: 623 Check: 9592 Weight: 1.00 Name: ENSTTRP00000010326/1-476 Len: 623 Check: 1950 Weight: 1.00 Name: ENSP00000294517/1-460 Len: 623 Check: 8234 Weight: 1.00 Name: bmy_11810T0/1-302 Len: 623 Check: 5435 Weight: 1.00 Name: BACU009636/1-555 Len: 623 Check: 8 Weight: 1.00 // 1 50 ENSBTAP00000027374/1-502 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000010326/1-476 ---------- ---------- ---------- ---------- ---------- ENSP00000294517/1-460 ---------- ---------- ---------- ---------- ---------- bmy_11810T0/1-302 ---------- ---------- ---------- ---------- ---------- BACU009636/1-555 MARRHVRQSA TPTPERDGHF ILPTTQRYWG RLLLIGQNRR GLGSTIATPP 51 100 ENSBTAP00000027374/1-502 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000010326/1-476 ---------- ---------- ---------- ---------- ---------- ENSP00000294517/1-460 ---------- ---------- ---------- ---------- ---------- bmy_11810T0/1-302 ---------- ---------- ---------- ---------- ---------- BACU009636/1-555 RGAAQVSRSP ATPPSSAPGS GPREGARGLC VAYFLRRRGQ RQLHPAHRLL 101 150 ENSBTAP00000027374/1-502 --MAGYLRET DFVMVEEGFS TRDLLEELTL GASQATTEEV AAFFVADLGA ENSTTRP00000010326/1-476 --MTGC-SEA DFVMVEEGFS TRD-LEQLTL G-SQVTTXXX XXXXXXXXXX ENSP00000294517/1-460 --MAGYLSES DFVMVEEGFS TRDLLKELTL GASQATTDEV AAFFVADLGA bmy_11810T0/1-302 --MAGYLSEA DFVMVEEGFS TRDLLEQLTL GASQSTTEEV AAFFVADLGA BACU009636/1-555 LGMAGYLSEA DFVMVEEGFS TRDLLEQLTL GASQSTTEEV AAFFVADLGA 151 200 ENSBTAP00000027374/1-502 VVRKHFCFLK CLPRVRSFYA VKCNSSPGVL KVLAELGLGF SCANKAEMEL ENSTTRP00000010326/1-476 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXAEMEL ENSP00000294517/1-460 IVRKHFCFLK CLPRVRPFYA VKCNSSPGVL KVLAQLGLGF SCANKAEMEL bmy_11810T0/1-302 VVRKHFCFLK CLPRVRPFYA VKCNSSPGVL KVLAELGLGF SCANKAEMEL BACU009636/1-555 VVRKHFCFLK CLPRVRPFYA VKCNSSPGVL KVLAELGLGF SCANKAEMEL 201 250 ENSBTAP00000027374/1-502 VQHIGVPASK IIYANPCKQI AHIKYAAKHG VRLLSFDNEM ELAKVVKSHP ENSTTRP00000010326/1-476 VQHIGVPASK IIYANPCKQI AHIKYAAKHG VRLLSFDNEM ELAKVVKSHP ENSP00000294517/1-460 VQHIGIPASK IICANPCKQI AQIKYAAKHG IQLLSFDNEM ELAKVVKSHP bmy_11810T0/1-302 VQHIGVPASK IIYANPCKQI AHIKYAAKHG VRLLSFDNEM ELAKVVKSHP BACU009636/1-555 VQHIGVPASK IIYANPCKQI AHIKYAAKHG VRLLSFDNEM ELAKVVKSHP 251 300 ENSBTAP00000027374/1-502 SAKMVLCVAT EDSHSLSRLS LKFGASLKSC RHLLENAKRD HVEVVGVSFH ENSTTRP00000010326/1-476 SAKMVLCIAT DDSHSRSRLS LKFGVSLKSC RQLLEDAKRN HVEVVGVSFH ENSP00000294517/1-460 SAKMVLCIAT DDSHSLSCLS LKFGVSLKSC RHLLENAKKH HVEVVGVSFH bmy_11810T0/1-302 SAKMVLCIAT DDSHSRSRLS LKFGVSLQSC RHLLEDAKRN HVEVVGVSFH BACU009636/1-555 SAKMVLCIAT DDSHSRSRLS LTFGVSLQSC RHLLEDAKRN HVEVVGVSFH 301 350 ENSBTAP00000027374/1-502 IGSGCPDPQA YAQSIADARV VFEMGAELGH RMHILDLGGG FPGVEDAKVR ENSTTRP00000010326/1-476 IGSGCPDPQA YARSIADARL VFEMGAELGH RMHILDLGGG FPGVEGAKVR ENSP00000294517/1-460 IGSGCPDPQA YAQSIADARL VFEMGTELGH KMHVLDLGGG FPGTEGAKVR bmy_11810T0/1-302 IGSGCPDPQA YAQSIADARL VFEMGAELGH RMHILDLGGG FPGVEGAK-- BACU009636/1-555 IGSGCPDPQA YAQSIADARL VFEMGAELGH RMHILDLGGG FPGVEGAKVR 351 400 ENSBTAP00000027374/1-502 FEEVSGVTGV ALGWARVGGR ATVILGSPLR HYFTSVYTIS DKLASKKKVT ENSTTRP00000010326/1-476 FEEISSVVNS ALDLYFPEGC GVDILAKLGR YYVTSAFTLA VSIIAKKEVL ENSP00000294517/1-460 FEEIASVINS ALDLYFPEGC GVDIFAELGR YYVTSAFTVA VSIIAKKEVL bmy_11810T0/1-302 ---ISSVVNS ALDLYFPEGC GVDILAKLGR YYVTSAFTLA ASIIAKKEVL BACU009636/1-555 FEEISSVVSS ALDLYFPEGC GVDILAKLGR YYVTSAFTLA ASIIAKKEVL 401 450 ENSBTAP00000027374/1-502 VCPPGWM--- ---------- ------WETT GMPATLVHHF GDGQGGLFSD ENSTTRP00000010326/1-476 LEQPGREATV PTPHAACAAP PPPLPAEENG SAPKTILYQL SEGEYGIFNS ENSP00000294517/1-460 LDQPGRE--- ---------- ------EENG STSKTIVYHL DEGVYGIFNS bmy_11810T0/1-302 LEQPGRE--- ---------- ---------- ---------- ---------- BACU009636/1-555 LEQPGRE--- ---------- ---------- ---XTILYQL GEGEYGIFNS 451 500 ENSBTAP00000027374/1-502 LMLSSLSDCP SLLQKPSTEQ PLYSSSLWGP VASGCDCVAE GLWLPQLHVG ENSTTRP00000010326/1-476 VLFDNTCPTP ILPKKPSTEQ PLYSSSLWGP VINGCDCIAE GLWLPQLHVW ENSP00000294517/1-460 VLFDNICPTP ILQKKPSTEQ PLYSSSLWGP AVDGCDCVAE GLWLPQLHVG bmy_11810T0/1-302 ---------- ---------- ---------- ---------- ---------- BACU009636/1-555 VLFDNTCPTP ILQKKPSMEQ PLYSSSLWGP VVDGCDCIAE GLWLPQLHVG 501 550 ENSBTAP00000027374/1-502 DWLVFENMGA YTVGVGSLLR GAQTCRITYA MSRVAWEALQ GQLLPAEQDE ENSTTRP00000010326/1-476 DWLVFENMGA YTVGMGSLLG GAHTCRITYA MSRVAWEALR GQLLPAEQDE ENSP00000294517/1-460 DWLVFDNMGA YTVGMGSPFW GTQACHITYA MSRVAWEALR RQLMAAEQED bmy_11810T0/1-302 ---------- ---------- ---------- ---------- ---------- BACU009636/1-555 DWLVFENMGA YTVGMGSLLG GAQTCRITYA MSRVAWEALR GQLLPAEQDE 551 600 ENSBTAP00000027374/1-502 DAEGMCKPLS CGWEITDTLC MGPVFTPASI MCIPETLASG TSQVEQTTPR ENSTTRP00000010326/1-476 DAEGTCRPLS CGWEITDTLC MGPVFTPASI M--------- ---------- ENSP00000294517/1-460 DVEGVCKPLS CGWEITDTLC VGPVFTPASI M--------- ---------- bmy_11810T0/1-302 ---------- ---------- ---------V S--------- ---------- BACU009636/1-555 DAEGTCKPLS CGWEITDTLC MGPVFTPASI M--------- ---------- 601 650 ENSBTAP00000027374/1-502 TSLPAPRSRV GSALVLGEVL AGI ENSTTRP00000010326/1-476 ---------- ---------- --- ENSP00000294517/1-460 ---------- ---------- --- bmy_11810T0/1-302 ---------- ---------- --- BACU009636/1-555 ---------- ---------- ---