KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:32:21 2014 Check: 00 .. Name: ENSP00000218104/1-745 Len: 802 Check: 9439 Weight: 1.00 Name: ENSBTAP00000027382/1-737 Len: 802 Check: 1990 Weight: 1.00 Name: ENSTTRP00000011098/1-634 Len: 802 Check: 382 Weight: 1.00 Name: BACU010287/1-591 Len: 802 Check: 5637 Weight: 1.00 Name: bmy_18760T0/1-699 Len: 802 Check: 6199 Weight: 1.00 // 1 50 ENSP00000218104/1-745 MPVLSRPRPW RGNTLKRTAV LLALAAYGAH KVYPLVRQCL APARGLQAPA ENSBTAP00000027382/1-737 MTVLSTPRAS RVTTLKRTAV VLALVAYGAH KLYPLVRQCL APARGPQAPA ENSTTRP00000011098/1-634 ---------- ---------- ---------- ---------- ---------- BACU010287/1-591 ---------- ---------- ---------- ---------- ---------- bmy_18760T0/1-699 MTVLSTPRPS RVTTLKRTAV VLALTAYGAH KIYPLVRQCL APGRGPQTPA 51 100 ENSP00000218104/1-745 --GEPTQEAS GV---AAAKA GMNRVFLQRL LWLLRLLFPR VLCRETGLLA ENSBTAP00000027382/1-737 VEGEPTPDVS GAPVASAGKA GVNQVFLQRL LWLLRLLFPR ILCRETGLLA ENSTTRP00000011098/1-634 ---------- ---------- ---------- ---------- ---------- BACU010287/1-591 ---------- ---------- ---------- ---------- ---------- bmy_18760T0/1-699 --GESPQEAS GATVGAAAKA GVNRVFFQRL LWLLRLLFPR ILCRETGLLA 101 150 ENSP00000218104/1-745 LHSAALVSRT FLSVYVARLD GRLARCIVRK DPRAFGWQLL QWLLIALPAT ENSBTAP00000027382/1-737 LHSAALVSRT FLSVYVARLD GRLARCIVRK DPQAFSWQLV QWLLIALPAT ENSTTRP00000011098/1-634 ---AALVSRT FLSVYVARLD GRLARCIVRK DPRAFGWQLL QWLLIALPAT BACU010287/1-591 ---------- ---------- ---------- ---------- ---------- bmy_18760T0/1-699 LHSAALVSRT FLSVYVARLD GRLARCIVRK DPRAFGWQLL QWLLIALPAT 151 200 ENSP00000218104/1-745 FVNSAIRYLE GQLALSFRSR LVAHAYRLYF SQQTYYRVSN MDGRLRNPDQ ENSBTAP00000027382/1-737 FINSAIRYLE GQLALAFRSR LVAHAYSLYF SQQTYYRVSN MDGRLRNPDQ ENSTTRP00000011098/1-634 FVNSAIRYLE GRLALAFRSR LVAHAYSLYF SQQTYYRVSN MDGRLRNPDQ BACU010287/1-591 ---------- ---------- ---------- ---------- MDGRLRNPDQ bmy_18760T0/1-699 FVNSAIRYLE GRLALAFRSR LVAHAYSLYF SQQTYYRVSN MDGRLRNPDQ 201 250 ENSP00000218104/1-745 SLTEDVVAFA ASVAHLYSNL TKPLLDVAVT SYTLLRAARS RGAGTAWPSA ENSBTAP00000027382/1-737 SLTEDVVAFA ASVAHLYSNL TKPLLDVAVT TYTLVRAARS RGAGTAWPSA ENSTTRP00000011098/1-634 SLTEDVVAFA ASVAHLYSNL TKPLLDVAVT TYTLVRVARS RGAGTAWPSA BACU010287/1-591 SLTEDVVAFA ASVAHLYSNL TKPLLDVAVT TYTLVRVARS RGAGTAWPSA bmy_18760T0/1-699 SLTEDVVAFA ASVAHLYSNL TKPLLDVAVT TYTLVRVARS RGAGTAWPSA 251 300 ENSP00000218104/1-745 IAGLVVFLTA NVLRAFSPKF GELVAEEARR KGELRYMHSR VVANSEEIAF ENSBTAP00000027382/1-737 IAGLVVFLTA NVLRAFSPKF GELVAEEARR KGELRYMHSR VVANSEEIAF ENSTTRP00000011098/1-634 IAGLVVFLTA NVLQAFSPKF GELVAEEARR KGELRYMHSR VVANSEEIAF BACU010287/1-591 IAGLVVFLTA NVLRAFSPKF GELVAEEARR KGELRYMHSR VVANSEEIAF bmy_18760T0/1-699 IAGLVVFLTA NVLRAFSPKF GELVAEEARR KGELRYMHSR VVANSEEIAF 301 350 ENSP00000218104/1-745 YGGHEVELAL LQRSYQDLAS QINLILLERL WYVMLEQFLM KYVWSASGLL ENSBTAP00000027382/1-737 YGGHEVELAL LQHSYQDLAS QINLILLERL WYVMLEQFLM KYVWSASGLL ENSTTRP00000011098/1-634 YGGHEVELAL LQHSYQDLAS QINLILLERL WYVMLEQFLM KYVWSASGLL BACU010287/1-591 YGGHEVELAL LQHSYQDLAS QINLILLERL WYVMLEQFLM KYVWSASGLL bmy_18760T0/1-699 YGGHEVELAL LQHSYQDLAS QINLILLERL WYVMLEQFLM KYVWSASGLL 351 400 ENSP00000218104/1-745 MVAVPIITAT GYSESDAEAV KKAALEKKEE ELVSERTEAF TIARNLLTAA ENSBTAP00000027382/1-737 MVAVPIITAT GYSESDSETV KKAAQAMKEG ELVSERTEAF TIARNLLTAA ENSTTRP00000011098/1-634 MVAVPIITAT GHAESDSEVA KKAALEAREE ELVSERTEAF TIARNLLTAA BACU010287/1-591 MVAVPIITAT GYSESDSEVA KKAALQTRGE ELVSERTEAF TVARNLLTAA bmy_18760T0/1-699 MVAVPIITAT GYSESGAEPG SPSL------ ---------- ---------- 401 450 ENSP00000218104/1-745 ADAIERIMSS YKEVTELAGY TARVHEMFQV FEDVQRCHFK RPRELEDAQA ENSBTAP00000027382/1-737 ADAIERVMSS YKEVTELAGY TARVYEMFQV FEDVQQCRFK RPGEPEDAHT ENSTTRP00000011098/1-634 ADAIERVMVS YKEVTELAGY TARVHEMFQV FEDVQHCRFK RPGEPEDTQA BACU010287/1-591 ADAIERVMAS YKEVTELAGY TARVHEMFQV FEDVRHCRFK RPREPEDTQA bmy_18760T0/1-699 ---------- --QVTELAGY TARVHEMFQV FEDVRHCRFK RPGEPEDTQA 451 500 ENSP00000218104/1-745 GSGTIGRSGV RVEGPLKIR- -GQVVDVEQG IICENIPIVT PSGEVVVASL ENSBTAP00000027382/1-737 GSGAIMRSGI RMEGPLQIR- -GQVVDVEQG IVCENIPIIT PTGEVVVASL ENSTTRP00000011098/1-634 GSGAVVRSGV RVEGSLQIR- -GQVVDVERG IVCENIPIVT PTGEVVVASL BACU010287/1-591 GSGAVVRSGV RVEGSLQIR- -GQVVDVEQG IVCEDIPIVT PAGEVVVASL bmy_18760T0/1-699 GSGAVVRSGV RVEGSLQIRG KGQVVDVEQG IVCEDIPIVT PAGEVVVASL 501 550 ENSP00000218104/1-745 NIRVEEGMHL LITGPNGCGK SSLFRILGGL WPTYGGVLYK PPPQRMFYIP ENSBTAP00000027382/1-737 NIRVEEGMHL LITGPNGCGK SSLFRILGGL WPTYGGVLYK PPPQRMFYIP ENSTTRP00000011098/1-634 NIRVEEGMHL LITGPNGCGK SSLFRILGGL WPTYGGVLYK PPPQRMFYVP BACU010287/1-591 NIRVEEGTHL LITGPNGCGK SSLFRILGGL WPTYGGVLYK PPPQRM---- bmy_18760T0/1-699 NIRVEEGTHL LITGPNGCGK SSLFRILGGL WPTYGGVLYK PPPQRMFYVP 551 600 ENSP00000218104/1-745 QRPYMSVGSL RDQVIYPDSV EDMQRKGYSE QDLEAILDVV HLHHILQREG ENSBTAP00000027382/1-737 QRPYMSVGSL RDQVIYPDSV EDMRRKGYSE EHLEGILDIV HLNHILQREG ENSTTRP00000011098/1-634 QRPYMSVGSL RDQVIYPDSV EDMRRKGFSE QHLEAILDIV HLHHILQREG BACU010287/1-591 --PYMSVGSL RDQVIYPDSV EDMRRKGFSE QHLEAILDIV HLNHILQREG bmy_18760T0/1-699 QRPYMSVGSL RDQVIYPDSV EDMRRKGFSE QHLEAILDIV HLNHILQREG 601 650 ENSP00000218104/1-745 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000027382/1-737 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000011098/1-634 ---------- ---------- ---------- ---------- ---------- BACU010287/1-591 DGQVPRAHVP SGQPFPESRA LPCSAIVVAR ALCPCCPAPV ELNGDLCPLP bmy_18760T0/1-699 ---------- ---------- ---------- ---------- ---------- 651 700 ENSP00000218104/1-745 GWEAMCDWKD VLSGGEKQRI GMARMFYHRP KYALLDECTS AVSIDVEGKI ENSBTAP00000027382/1-737 GWEAVCDWKD VLSGGEKQRV GMARMFYHRP KYALLDECTS AVSIDVEGKI ENSTTRP00000011098/1-634 GWEAVCDWKD VLSGGEKQRV GMARMFYHRP KYALLDECTS AVSIDVEGKI BACU010287/1-591 GWEAVCDWKD ILSGGEKQRV GMARMFYHRP KYALLDECTS AVSIDVEGKI bmy_18760T0/1-699 GWEAVCDWKD ILSGGEKQRV GMARMFYHRP KYALLDECTS AVSIDVEGKI 701 750 ENSP00000218104/1-745 FQAAKDAGIA LLSITHRPSL WKYHTHLLQF DGEGGWKFEK LDSAARLSLT ENSBTAP00000027382/1-737 FQAAKDAGIA LLSITHRPSL WKYHTHLLQF DGEGGWKFEK LDSAARLSLT ENSTTRP00000011098/1-634 FQAAKDAGIA LLSITHRPSL WKYHTHLLQF DGEGGWKFEK LDSAARLSLT BACU010287/1-591 FQAAKDAGIA LLSITHRPSL WKYHTHLLQF DGEGGWKFEK LDSAARLSLT bmy_18760T0/1-699 FQAAKDAGIA LLSITHRPSL WKYHTHLLQF DGEGGWKFEK LDSAARLSLT 751 800 ENSP00000218104/1-745 EEKQRLEQQL AGIPKMQRRL QELCQILGEA VAPAHVPAPS PQGPGGLQGA ENSBTAP00000027382/1-737 EEKQRLEQQL AGIPKMQRRL QELCQILG-- ---------- -QGPGANQGT ENSTTRP00000011098/1-634 EEKQRLEQQL AGIPKMQRRL QELCEILG-- ---------- -QGPGVLQAA BACU010287/1-591 EEKQRLEQQL AGIPKMQRRL QELCQILG-- ---------- -QGPGVLQAA bmy_18760T0/1-699 EEKQRLEQQL AGIPKMQRRL QELRQILG-- ---------- -QGPGVLQAA 801 850 ENSP00000218104/1-745 ST ENSBTAP00000027382/1-737 AT ENSTTRP00000011098/1-634 AT BACU010287/1-591 AT bmy_18760T0/1-699 AT