KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:32:25 2014 Check: 00 .. Name: BACU011205/1-221 Len: 614 Check: 6158 Weight: 1.00 Name: ENSP00000332791/1-604 Len: 614 Check: 1977 Weight: 1.00 Name: ENSBTAP00000027396/1-604 Len: 614 Check: 1736 Weight: 1.00 Name: ENSTTRP00000011822/1-604 Len: 614 Check: 1449 Weight: 1.00 Name: bmy_20032T0/1-614 Len: 614 Check: 5078 Weight: 1.00 // 1 50 BACU011205/1-221 MSGS------ ----SSVAA- ---------- ---------- ---------- ENSP00000332791/1-604 MAGDVEGFCS SIHDTSVSAG FRALYEEGLL LDVTLVIEDH QFQAHKALLA ENSBTAP00000027396/1-604 MAGDMEGFCS SIHDTSVSAG FRALYEEGLL LDVTLVIEDH QFQAHKALLA ENSTTRP00000011822/1-604 MAGDVEGFCS SIHDTSVSAG FRALYEEGLL LDVTLVIEDH QFQAHKALLA bmy_20032T0/1-614 MAGDVEGFCS SIHDTSVSAG FRALYEEGLL LDVTLVIEDH QFQAHKALLA 51 100 BACU011205/1-221 ---------- ---------- ---------- ---------- ---------- ENSP00000332791/1-604 TQSDYFRIMF TADMRERDQD KIHLKGLTAT GFSHVLQFMY YGTIELSMNT ENSBTAP00000027396/1-604 TQSDYFRIMF TADMRERDQN KIHLKGLTAT GFSHVLQFMY YGTIELSMST ENSTTRP00000011822/1-604 TQSDYFRIMF TADMRERDQD KIHLKGLTAT GFSHVLQFMY YGTIELSMST bmy_20032T0/1-614 TQSDYFRIMF TADMRERDQD KIHLKGLTAT GFSHVLQFMY YGTIELSMST 101 150 BACU011205/1-221 ---------- ---------- ---------M NKVVQQLRL- -EAGLN---- ENSP00000332791/1-604 VHEILQAAMY VQLIEVVKFC CSFLLAKICL ENCAEIMRLL DDFGVNIEGV ENSBTAP00000027396/1-604 VHEILQAAMY VQLIEVVKFC CSFLLAKICL ENCAEIMRLL DDFGVNIEGV ENSTTRP00000011822/1-604 VHEILQAAMY VQLIEVVKFC CSFLLAKICL ENCAEIMRLL DDFGVNIEGV bmy_20032T0/1-614 VHEILQAAMY VQLIEVVKFC CSFLLAKICL ENCAEIMRLL DDFGVNIEGV 151 200 BACU011205/1-221 ---------- ---------- ---------- ---------- ---------- ENSP00000332791/1-604 REKLDTFLLD NFVPLMSRPD FLSYLSFEKL MSYLDNDHLS RFPEIELYEA ENSBTAP00000027396/1-604 REKLDTFLLD NFVPLMSRPD FLSYLSFEKL MSYLDNDHLS RFPEIELYEA ENSTTRP00000011822/1-604 REKLDAFLLD NFVPLMSRPD FLSYLSFEKL MSYLDNDHLS RFPEIELYEA bmy_20032T0/1-614 REKLDAFLLD NFVPLMSRPD FLSYLSFEKL MSYLDNDHLS RFPEIELYEA 201 250 BACU011205/1-221 ---------- RVKVSQAAAD LKQFCL---- ---------- ---------- ENSP00000332791/1-604 VQSWLRHDRR RWRHTDTIIQ NIRFCLMTPT SVFE------ ----KVKTSE ENSBTAP00000027396/1-604 VQSWLRHDRR RWRHTDTIIQ NIRFCLMTPS SVFE------ ----KVKTSE ENSTTRP00000011822/1-604 VQSWLRHDRR RWRHTDTIIQ NIRFCLMTPS SVFE------ ----KVKTSE bmy_20032T0/1-614 VQSWLRHDRR RWRHTDTIIQ NIRFCLMTPS SVFEKGIFSI INMRKVKTSE 251 300 BACU011205/1-221 ---------- ---------Q NAQHDPLLTG VSSSTNPFRP Q----KGD-- ENSP00000332791/1-604 FYRYSRQLRY EVDQALNYFQ NVHQQPLLDM KSSRIRSAKP QTTVFRGMIG ENSBTAP00000027396/1-604 FYRYSRQLRY EVDQALNYFQ NIHQQPLLDM KSSRIRSAKP QTTVFRGMIG ENSTTRP00000011822/1-604 FYRYSRQLRY EVDQALNYFQ NVHQQPLLDM KSSRIRSAKP QTTVFRGMTG bmy_20032T0/1-614 FYRYSRQLRY EVDQALNYFQ NIHQQPLLDM KSSRIRSAKP QTTVFRGMIG 301 350 BACU011205/1-221 ---------- ---------- ENKSIELEID C--------- ---------- ENSP00000332791/1-604 HSMVNSKILL LKKPRVWWEL EGPQVPLRPD CLAIVNNFVF LLGGEELGPD ENSBTAP00000027396/1-604 HSMVNSKILL LKKPRVWWEL EGPQVPLRPD CLAIVNNFVF LLGGEELGPD ENSTTRP00000011822/1-604 HSMVNSKILL LKKPRVWWEL EGPQVPLRPD CLAIVNNFVF LLGGEELGPD bmy_20032T0/1-614 HSMVNSKILL LKKPRVWWEL EGPQVPLRPD CLAIVNNFVF LLGGEELGPD 351 400 BACU011205/1-221 ---------- ---------- ---------- ----GVTGK- ---------- ENSP00000332791/1-604 GEFHASSKVF RYDPRQNSWL QMADMSVPRS EFAVGVIGKF IYAVAGRTRD ENSBTAP00000027396/1-604 GEFHASSKVF RYDPRQNSWL RMADMSVPRS EFAVGVIGKF IYAVAGRTRD ENSTTRP00000011822/1-604 GEFHASSKVF RYDPRQNSWL RMADMSVPRS EFAVGVTEKF IYAVAGRTRD bmy_20032T0/1-614 GEFHASSKVF RYDPRQNSWL RMADMSVPRS EFAVGVIGKF IYAVAGRTRD 401 450 BACU011205/1-221 ---------- ---EDMEWGQ PYLLVKGENL FNELGNK--- ---------- ENSP00000332791/1-604 ETFYSTERYD ITNDKWEFVD PYPVNKYGHE GTVLNNKLFI TGGITSSSTS ENSBTAP00000027396/1-604 ETFYSTERYD ITNDKWEFVD PYPVNKYGHE GTVLNNKLFI TGGITSSSTS ENSTTRP00000011822/1-604 ETFYSTERYD ITNDKWEFVD PYPVNKYGHE GTVLNNKLFI TGGITSSSTS bmy_20032T0/1-614 ETFYSTERYD ITNDKWEFVD PYPVNKYGHE GTVLNNKLFI TGGITSSSTS 451 500 BACU011205/1-221 ------ERER NQMISRNRKG SENSENDWRK ---------- ---------- ENSP00000332791/1-604 KQVCVFDPSK EGTIEQRTRR TQVVTNCWEN KSKMNYARCF HKMISYNGKL ENSBTAP00000027396/1-604 KQVCVFDPSK EGTIEQRTRR TQVVTNCWEN KSKMNYARCF HKMISYNGKL ENSTTRP00000011822/1-604 KQVCVFDPSK EGTIEQRTRR TQVVTNCWEN KSKMNYARCF HKMISYNGKL bmy_20032T0/1-614 KQVCVFDPSK EGTIEQRTRR TQVVTNCWEN KSKMNYARCF HKMISYNGKL 501 550 BACU011205/1-221 ---------- ---------- --EVYNPETD QWTILASMPI GRSGHGVTVL ENSP00000332791/1-604 YVFGGVCVIL RASFESQGCP STEVYNPETD QWTILASMPI GRSGHGVTVL ENSBTAP00000027396/1-604 YVFGGVCVIL RASFESQGCP STEVYNPETD QWTILASMPI GRSGHGVTVL ENSTTRP00000011822/1-604 YVFGGVCVIL RASFESQGCP STEVYNPETD QWTILASMPI GRSGHGVTVL bmy_20032T0/1-614 YVFGGVCVIL RASFESQGCP STEVYNPETD QWTILASMPI GRSGHGVTVL 551 600 BACU011205/1-221 DKQIMVLGGL CYNGHYSDSI LTFDPDENKW KEDEYPRMPC KLDGLQVCNL ENSP00000332791/1-604 DKQIMVLGGL CYNGHYSDSI LTFDPDENKW KEDEYPRMPC KLDGLQVCNL ENSBTAP00000027396/1-604 DRQIMVLGGL CYNGHYSDSI LTFDPDENKW KEDEYPRMPC KLDGLQVCNL ENSTTRP00000011822/1-604 DKQIMVLGGL CYNGHYSDSI LTFDPDENKW KEDEYPRMPC KLDGLQVCNL bmy_20032T0/1-614 DKQIMVLGGL CYNGHYSDSI LTFDPDENKW KEDEYPRMPC KLDGLQVCNL 601 650 BACU011205/1-221 HFPEYILDEV RRCN ENSP00000332791/1-604 HFPDYVLDEV RRCN ENSBTAP00000027396/1-604 HFPEYILDEV RRCN ENSTTRP00000011822/1-604 HFPEYILDEV RRCN bmy_20032T0/1-614 HFPEYILDEV RRCN