KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:32:28 2014 Check: 00 .. Name: ENSBTAP00000027417/1-313 Len: 333 Check: 7996 Weight: 1.00 Name: ENSP00000306390/1-290 Len: 333 Check: 3579 Weight: 1.00 Name: bmy_02732T0/1-314 Len: 333 Check: 5879 Weight: 1.00 Name: ENSTTRP00000007800/1-257 Len: 333 Check: 2688 Weight: 1.00 // 1 50 ENSBTAP00000027417/1-313 ------MRQV LAAVLLLLLL RSVSGTRGGE ALNACGRPRM LNRMVGGQNA ENSP00000306390/1-290 ------MRRP AAVPLLLLL- --CFGSQRAK AATACGRPRM LNRMVGGQDT bmy_02732T0/1-314 MELAPSERTP GCVPL----- ---------- ---ACGSPRM LNRMVGGQDA ENSTTRP00000007800/1-257 ---------- ---------- -----TQEAE ALTACGSPRM LNRMVGGQDT 51 100 ENSBTAP00000027417/1-313 LEGEWPWQVS IQRNGSHFCG GSLITDRWVL TAAHCFSNTS ETSLYQVLLG ENSP00000306390/1-290 QEGEWPWQVS IQRNGSHFCG GSLIAEQWVL TAAHCFRNTS ETSLYQVLLG bmy_02732T0/1-314 LEGEWPWQVS IQRNGSHFCG GSLITERWVL TAAHCFSNTS ETSLYQVLLG ENSTTRP00000007800/1-257 LEGEWPWQVS IQRNGSHFCG GSLITERWVL TAAHCFSNTS ETSLCQVLLG 101 150 ENSBTAP00000027417/1-313 VLQLARPGPH AVYARVKRVE SNPKYQGMAS SADVALVELE APVTFTNYIL ENSP00000306390/1-290 ARQLVQPGPH AMYARVRQVE SNPLYQGTAS SADVALVELE APVPFTNYIL bmy_02732T0/1-314 VRQLVKPGPH AMYARVKRVK SNPLYQGMAS SADVALVELE APVTFNNYIL ENSTTRP00000007800/1-257 VRQLVKPGPH AMYTRVKQVK SNPLYQGMAS SADVALVELE APVTFTNYIL 151 200 ENSBTAP00000027417/1-313 PVCVPDPSVV FESGMKCWVT GWGTPSEQDS LPKPRTLQKL AVPIISTPKC ENSP00000306390/1-290 PVCLPDPSVI FETGMNCWVT GWGSPSEEDL LPEPRILQKL AVPIIDTPKC bmy_02732T0/1-314 PVCVPDPSVV FETGMNCWVA GWGSPSEQDH LPNPRSLQKL AVPIIDTPKC ENSTTRP00000007800/1-257 PVCVPDPSVI FETGMNCWVT GWGNPSEQDH LPNPRILQKL AVPIIDTPKC 201 250 ENSBTAP00000027417/1-313 NLLYSKDAES GFQPRTIKDD MLCAGFAEGK RDACKGDSGG PLVCLVGQVW ENSP00000306390/1-290 NLLYSKDTEF GYQPKTIKND MLCAGFEEGK KDACKGDSGG PLVCLVGQSW bmy_02732T0/1-314 NLLYSKDSES GFQPKTIKDD MLCAGFAEGK KDACKGDSGG PLVCLVGQSW ENSTTRP00000007800/1-257 NLLYSKDSEP GFQPKTIKDD MLCAGFAEGK KDACKGDSGG P-VCL-GQSW 251 300 ENSBTAP00000027417/1-313 LQAGVISWGE GCARRNRPGV YIRLTSHHDW IHRIIPELQF QRAGPGSAQK ENSP00000306390/1-290 LQAGVISWGE GCARQNRPGV YIRVTAHHNW IHRIIPKLQF QPARLG-GQK bmy_02732T0/1-314 LQAGVISWGE GCARRNRPGV YIRVTSHHNW IHRIIPELQF QRASSG-GQK ENSTTRP00000007800/1-257 L-AGVTSWGE GCARRNRP-V YIG-TSHHN- -HRIIPXHQ- ---------- 301 350 ENSBTAP00000027417/1-313 RDPRTRQPLG RNSARYPAA- ---------- --- ENSP00000306390/1-290 ---------- ---------- ---------- --- bmy_02732T0/1-314 REPRGQQPLS RNFAPCLAAH AILLVLMALL TFL ENSTTRP00000007800/1-257 ---------- ---------- ---------- ---