KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:32:28 2014 Check: 00 .. Name: ENSP00000384725/1-595 Len: 690 Check: 3275 Weight: 1.00 Name: ENSBTAP00000027421/1-590 Len: 690 Check: 3144 Weight: 1.00 Name: bmy_09012T0/1-296 Len: 690 Check: 7978 Weight: 1.00 Name: ENSTTRP00000006439/1-455 Len: 690 Check: 6424 Weight: 1.00 Name: BACU013028/1-201 Len: 690 Check: 6531 Weight: 1.00 // 1 50 ENSP00000384725/1-595 MLKPGDPGGS AFLKVDPAYL QHWQQLFPHG GAGPLKGSGA AGLLSAPQPL ENSBTAP00000027421/1-590 MLKPGDPGGS AFLKVDPAYL QHWQQLFPHG GGGPLKGGGA AGPLGAPQPL bmy_09012T0/1-296 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000006439/1-455 ---------- ---------- ---------- --GPSKCGGG CCGCGG---- BACU013028/1-201 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000384725/1-595 QPPPPPPPPE RAEPPPDSLR PRPASLSSAS STPASSSTSA SSASSC---A ENSBTAP00000027421/1-590 Q---PPPPPE RAEPQPDSLR PRPASLSSAS STPASSSTSA SSASSCAAAA bmy_09012T0/1-296 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000006439/1-455 ---------- ---------- ---------- ---------- ---------- BACU013028/1-201 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000384725/1-595 AAAAAAALAG LSALPVSQLP VFAPLAAAAV AAEPLPPKEL CLGATSGPGP ENSBTAP00000027421/1-590 AAAAAAALAG LSALPVAQLP VFAPL--ATV AAEPLPPKDL CLGATSGPGP bmy_09012T0/1-296 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000006439/1-455 ---------- ---------- ---------- ---------- ---------- BACU013028/1-201 ---------- ---------- ---------- ---------- ---------- 151 200 ENSP00000384725/1-595 VKCGGGGGGG GEGRGAPRFR CSAEELDYYL YGQQRMEIIP LNQHTSDPNN ENSBTAP00000027421/1-590 SKC---GGSG GDGRGVPRFR CSAEELDYYL YGQQRMEIIP LNQHTSDPNN bmy_09012T0/1-296 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000006439/1-455 ------GGGV GNVRGAPRFR CRAEELAYYP YGQQRMEIIP LNQHTSDPNN BACU013028/1-201 ---------- ---------- ---------- ---------- ---------- 201 250 ENSP00000384725/1-595 RCDMCADNRN GECPMHGPLH SLRRLVGTSS AAAAAPPPEL PEWLRDLPRE ENSBTAP00000027421/1-590 RCDMCADNRN GECPMHGPLH SLRRLVGTSS AAAAAPPPEL PEWLRDLPRE bmy_09012T0/1-296 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000006439/1-455 RCDMCADNRN GECPMHGPLH SLRRLVGTSS AATAAPPPEL PEWLRDLPRE BACU013028/1-201 ---------- ---------- ---------- ---------- ---------- 251 300 ENSP00000384725/1-595 VCLCTSTVPG LAYGICAAQR IQQGTWIGPF QGVLLPPEKV QAGAVRNTQH ENSBTAP00000027421/1-590 VCLCTSTVPG LAYGICAAQR IQQGTWIGPF QGVLLPPEKV QAGAVRNTQH bmy_09012T0/1-296 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000006439/1-455 VCLCTSTVPG LAYGICAAQR IQQGTWIGPF QGVLLPPEKV QAGAVRNTQH BACU013028/1-201 ---------- ---------- ---------- ---------- ---------- 301 350 ENSP00000384725/1-595 LWEIYDQDGT LQHFIDGGEP SKSSWMRYIR CARHCGEQNL TVVQYRSNIF ENSBTAP00000027421/1-590 LWEIYDQDGT LQHFIDGGEP SKSSWMRYIR CARHCGEQNL TVVQYRSNIF bmy_09012T0/1-296 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000006439/1-455 LWEIYDQDGT LQHFIDGGEP SKSSWMRYIR CARHCGEQNL TVVQYRSNIF BACU013028/1-201 ---------- ---------- ---------- ---------- ---------- 351 400 ENSP00000384725/1-595 YRACIDIPRG TELLVWYNDS YTSFFGIPLQ CIAQDENLNV PSTVMEAMCR ENSBTAP00000027421/1-590 YRACIDIPRG TELLVWYNDS YTSFFGIPLQ CIAQDENLNV PSTVMEAMCR bmy_09012T0/1-296 ---------- ---------- ---------- ---------- ----MEAMCR ENSTTRP00000006439/1-455 YRACIDIPRG TELLVWYNDS YTSFFGIPLQ CIAQDENLNV PSTVMEAMCR BACU013028/1-201 ---------- ---------- ---------- ---------- -------MCR 401 450 ENSP00000384725/1-595 QDALQPFNKS SKLAPTTQQR SVVFPQTPCS RNFSLLDKSG PIESGFNQIN ENSBTAP00000027421/1-590 QDALQPFNKS SKLSQAPQQR SVVFPQTPCG RNFSLLDKSG PLESGFNQIS bmy_09012T0/1-296 QDPLQPFNKS SKLSPAAQQR SVVFPQTPCG RNFSLLDKSG PMESGFNQIN ENSTTRP00000006439/1-455 QDPLQ-FNKS SKLSPATQQR SVVFPQTPCG RNFSLLDKSG PMESGFNQIN BACU013028/1-201 QDPLQPFNKS SKLSPATQQR SVVFPQTPCG RNFSLLDKSG PMESGFNQIN 451 500 ENSP00000384725/1-595 VKNQRVLASP TSTSQLHSEF SDWHLWKCGQ CFKTFTQRIL LQMHVCTQNP ENSBTAP00000027421/1-590 VKNQRVLASP TSTSQLHSEF SDWHLWKCGQ CFKTFTQRIL LQMHVCTQNP bmy_09012T0/1-296 VKNQRVLASP TSTSQLHSEF SDWHLWKCGQ CFKTFTQRIL LQMHVCTQNP ENSTTRP00000006439/1-455 VKNQRVLASP TSTSQLHSEF SDWHLWKCGQ CFKTFTQRIL LQMHVCTQNP BACU013028/1-201 VKNQRVLASP TSTSQLHSEF SDWHLWKCGQ CFKTFTQRIL LQMHVCTQNP 501 550 ENSP00000384725/1-595 DR-------- ---------- ---------- ---------- --------PY ENSBTAP00000027421/1-590 DR-------- ---------- ---------- ---------- --------PY bmy_09012T0/1-296 DRFIVVVITE HTRKILLELE KVSTVPFGGR GSPERGNIEN LGKAVSCLPY ENSTTRP00000006439/1-455 DR-------- ---------- ---------- ---------- --------PY BACU013028/1-201 DR-------- ---------- ---------- ---------- --------PY 551 600 ENSP00000384725/1-595 QCGHCSQSFS QPSELRNHVV THSSDRPFKC GYCGRAFAGA TTLNNHIRTH ENSBTAP00000027421/1-590 QCGHCSQSFS QPSELRNHVV THSSDRPFKC GYCGRAFAGA TTLNNHIRTH bmy_09012T0/1-296 QCGHCSQSFS QPSELRNHVV THSSDRPFKC GYCGRAFAGA TTLNNHIRTH ENSTTRP00000006439/1-455 QCGHCSQSFS QPSELRNHVV THSSDRPFKC GYCGRAFAGA TTLNNHIRTH BACU013028/1-201 QCGHCSQSFS QPSELRNHVV THSSDRPFKC GYCGRAFAGA TTLNNHIRTH 601 650 ENSP00000384725/1-595 TGEKPFK--- ---------- ---------- ---------- ---------- ENSBTAP00000027421/1-590 TGEKPFK--- ---------- ---------- ---------- ---------- bmy_09012T0/1-296 TGEKPFKFQE RTLGGALRWL LCPDGCLASA PGSPDKWNSD REATVRAQLA ENSTTRP00000006439/1-455 TGEKPFK--- ---------- ---------- ---------- ---------- BACU013028/1-201 TGEKPFK--- ---------- ---------- ---------- ---------- 651 700 ENSP00000384725/1-595 ---CERCERS FTQATQLSRH QRMPNECKPI TESPESIEVD ENSBTAP00000027421/1-590 ---CERCERS FTQATQLSRH QRMPNECKPI TESPESIEVD bmy_09012T0/1-296 AAMCERCERS FTQATQLSRH QRMPNECKPI TESPESIEVD ENSTTRP00000006439/1-455 ---CERCERS FTQATQLSRH QRMPNECKPI TESPESIEVD BACU013028/1-201 ---CERCERS FTQATQLSRH QRMPNECKPI TESPESIEVD