KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:32:30 2014 Check: 00 .. Name: ENSTTRP00000013905/1-676 Len: 676 Check: 2012 Weight: 1.00 Name: ENSP00000242591/1-676 Len: 676 Check: 5314 Weight: 1.00 Name: ENSBTAP00000027427/1-676 Len: 676 Check: 2630 Weight: 1.00 Name: BACU013619/1-535 Len: 676 Check: 1731 Weight: 1.00 Name: bmy_01427T0/1-387 Len: 676 Check: 2726 Weight: 1.00 // 1 50 ENSTTRP00000013905/1-676 MSDQIKFIVD NLNKXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXQV ENSP00000242591/1-676 MSDQIKFIMD SLNKEPFRKN YNLITFDSLE PMQLLQVLSD VLAEIDPKQL ENSBTAP00000027427/1-676 MSDQIKFIVD NLNKEPFRKN YNLITFDSLE PMQLLQVLND VLAEIDPKQV BACU013619/1-535 MSDQIKFIVD NLNKEPFGKN YNLITFDSLE PMQLLQVLSD VLAEIDPKQV bmy_01427T0/1-387 MSDQIKFIVD NLNKEPFGKN YNLITFDSLE PMQLLQVLSD --------QV 51 100 ENSTTRP00000013905/1-676 VDIREEMPEQ TAKRMLSLLG ILKYKPPGNA TDMSNFRQGL VIGSKPVIYP ENSP00000242591/1-676 VDIREEMPEQ TAKRMLSLLG ILKYKPSGNA TDMSTFRQGL VIGSKPVIYP ENSBTAP00000027427/1-676 VDIREEMPEQ TAKRMLSLLG ILKYKPPGNA ADMSTFRQGL VIGSKPVIYP BACU013619/1-535 VDIREEMPEQ TAKRMLSPLG ILKYKPPGNA TDMSNFRQGL VIGSKPVIYP bmy_01427T0/1-387 VDIREEMPEQ TAKRMLSLLG ILKYKPPGNA TDMSNFRQGL VIGSKPVIYP 101 150 ENSTTRP00000013905/1-676 VLHWLLQRTN ELKKRAYLAR FLIKLEVPSE FLQDETVADT NKQYEDLMEA ENSP00000242591/1-676 VLHWLLQRTN ELKKRAYLAR FLIKLEVPSE FLQDETVADT NKQYEELMEA ENSBTAP00000027427/1-676 VLHWLLQRTN ELKKRAYLAR FLIKLEVPSE FLQDETVADT NKQYEDLMEA BACU013619/1-535 VLHWLLQRTN ELKKRAYLAR FLIKLEVPSE FLQDETVADT NKQYEDLMEA bmy_01427T0/1-387 VLHWLLQRTN ELKKRAYLAR FLIKLEVPSE FLQDETVADT NKQYEDLMEA 151 200 ENSTTRP00000013905/1-676 FKTLHKECEQ LKTSGFSTAE IRRDISAMEE EKDQLIKRVE RLKKRXXXXX ENSP00000242591/1-676 FKTLHKEYEQ LKISGFSTAE IRKDISAMEE EKDQLIKRVE HLKKRVETAQ ENSBTAP00000027427/1-676 FKTLHKECEQ LKISGFSTAE IRRDISAMEE EKDQLIKRVE RLKKRVETVQ BACU013619/1-535 FKTLHKECEQ LKASGFSTAE IRRDISAMEE EKDQLIKRVE RLKKRVETVQ bmy_01427T0/1-387 FKTLHKECEQ LKTSGFSTAE IRRDISAMEE EKDQLIKRVE RLKKRVETVQ 201 250 ENSTTRP00000013905/1-676 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXLFHAVQRL QRIQNQLKSM ENSP00000242591/1-676 NHQWMLKIAR QLRVEKEREE YLAQQKQEQK NQLFHAVQRL QRVQNQLKSM ENSBTAP00000027427/1-676 NHQRMLKIAR QLRVEKEREE FLAQQKQEQK NQLFHAVQRL QRIQNQLKSM BACU013619/1-535 NHQRMLKIAR QLRVEKEREE FLAQQKQEQK NQ-------- ---------- bmy_01427T0/1-387 NHQRMLKIAR QLRVEKEREE FLAQQKQEQK NQLFHAVQRL QRIQNQLKSM 251 300 ENSTTRP00000013905/1-676 RHAAADAKPE SLMKRLEEEI KFNSYMVTEK FPKELENKKK ELHFLQKVVS ENSP00000242591/1-676 RQAAADAKPE SLMKRLEEEI KFNLYMVTEK FPKELENKKK ELHFLQKVVS ENSBTAP00000027427/1-676 RHAAADATPE SLMKRLEEEI KFNSYMVTEK FPKELENKKK ELHFLQKVVS BACU013619/1-535 ---------- ---------- ---------- ---------- ---------- bmy_01427T0/1-387 RHAAADAKPE SLMKRLEEEI KFNSYMVTEK FPKELENKKK ELXFLQKVVS 301 350 ENSTTRP00000013905/1-676 EPAMGHSDLL ELESKINEIN TQISQLIEKK MMRNEPIEGK LSLYRQQASI ENSP00000242591/1-676 EPAMGHSDLL ELESKINEIN TEINQLIEKK MMRNEPIEGK LSLYRQQASI ENSBTAP00000027427/1-676 EPAMGHSDLL ELESKINEIN TQINQLIEKK MMRNEPIEGK LSLYRQQASI BACU013619/1-535 ---------- -----INEIN TQISQLIEKK MVRNEPIEGK LSLYRQQASI bmy_01427T0/1-387 EPAMGHSDLL ELESKINEIN TQISQLIEKK MMRNEPIEGK LSLYRQQASI 351 400 ENSTTRP00000013905/1-676 ISRKKEAKAE ELQEAKEKLA NLEREVSAKT NQTREFDGTE VLKGDEFKRY ENSP00000242591/1-676 ISRKKEAKAE ELQEAKEKLA SLEREASVKR NQTREFDGTE VLKGDEFKRY ENSBTAP00000027427/1-676 ISRKKEAKAE ELQEAKEKLA NLEREVSVKT SQTREYDGTE VLKGDEFKRY BACU013619/1-535 ISRKKEAKAE ELQEAKEKLA NLEREVSVKT NQTREFDGTE VLKGDEFKRY bmy_01427T0/1-387 ISRKKEAKAE ELQEAKEKLA NLEREVSVKT NQTREFDGTE VLKGD----- 401 450 ENSTTRP00000013905/1-676 VSKLRSKSTV FKKKHQIIAE FKAEFGLLQR TEELLKQRHE NIQHQLQTIE ENSP00000242591/1-676 VNKLRSKSTV FKKKHQIIAE LKAEFGLLQR TEELLKQRHE NIQQQLQTME ENSBTAP00000027427/1-676 VSKLRSKSTV FKKKHQIIAE FKAEFGLLQR TEELLKQRHE NIQHQLQTIE BACU013619/1-535 VSKLRSKSTV FKKKHQIIAE FKAEFGLLQR TEELLKQRHE NIQHQLQTIE bmy_01427T0/1-387 ---------- ---------- ---------- ---------- ---------- 451 500 ENSTTRP00000013905/1-676 EKKGISGYSY TQEELERVSA LKSEVDEVKG RTLDDMSEMV KKLNSLVSEK ENSP00000242591/1-676 EKKGISGYSY TQEELERVSA LKSEVDEMKG RTLDDMSEMV KKLYSLVSEK ENSBTAP00000027427/1-676 EKRGISGYSY TQEELERVSA LKSEVDEMKG RTLDDMSEMV KKLNSLVSEK BACU013619/1-535 EKKGISGYSY TQEELERVSA LKSEVDEMKG RTLDDMSEMV KRLNSLVSEK bmy_01427T0/1-387 ---------- ---------- ---------- ---------- ---------- 501 550 ENSTTRP00000013905/1-676 KSALAPVIKE LRQLRQKCQE LTQECDEKKS QYDSCAAGLE SNRSKLEQEV ENSP00000242591/1-676 KSALASVIKE LRQLRQKYQE LTQECDEKKS QYDSCAAGLE SNRSKLEQEV ENSBTAP00000027427/1-676 KSALAPIIKE LRQLRQKCQE LTQECDEKKS QYDSCAAGLE SNRSKLEQEV BACU013619/1-535 KSALAPVIKE LRQLRQKCQS Y--------- ---------- ---------- bmy_01427T0/1-387 ---------- ---------- ---------- ---------- ---------- 551 600 ENSTTRP00000013905/1-676 RGLREECLQD ESRYHYTNCM IKNLEVQLCR ATDEMKAYVS SDQQEKRKAI ENSP00000242591/1-676 RRLREECLQE ESRYHYTNCM IKNLEVQLRR ATDEMKAYIS SDQQEKRKAI ENSBTAP00000027427/1-676 RGLREECLQE ESRYHYINCM IKNLEVQLRR ATDEMKAYVS SDQQEKRKAI BACU013619/1-535 ---------- EVTFFYGQVK VQSLPTS--- ---------- ------GDKL bmy_01427T0/1-387 ---------- ---------- ---------- ---------- ---------- 601 650 ENSTTRP00000013905/1-676 REQYTKNIAE QENLGKKLRE KQKAVRESHG PNMKQVKMWR DFEQLMECKK ENSP00000242591/1-676 REQYTKNTAE QENLGKKLRE KQKVIRESHG PNMKQAKMWR DLEQLMECKK ENSBTAP00000027427/1-676 REQYTKNIAE QENLGKKLRE KQKAVRESHG PNMKQAKMWH DFEQLMECKK BACU013619/1-535 MEQYTKNIAE QENLGKKLRE KQKAVRESHG PNMKQVKMWR DFEQLMECKK bmy_01427T0/1-387 ---------- ---------- ---------- ---------- ---------- 651 700 ENSTTRP00000013905/1-676 QCFLKQQSQT SIGQVIQEGG EDRLIL ENSP00000242591/1-676 QCFLKQQSQT SIGQVIQEGG EDRLIL ENSBTAP00000027427/1-676 QCFLKQQTQT SIGQVIQEGG EDRLIL BACU013619/1-535 QCFLKQQSQT SIGQVIQEGG EDRLVL bmy_01427T0/1-387 ---------- ---------- ------