KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:32:32 2014 Check: 00 .. Name: ENSP00000356729/1-532 Len: 754 Check: 9098 Weight: 1.00 Name: ENSBTAP00000027444/1-532 Len: 754 Check: 946 Weight: 1.00 Name: BACU000671/1-754 Len: 754 Check: 7795 Weight: 1.00 Name: bmy_13407T0/1-532 Len: 754 Check: 2579 Weight: 1.00 Name: ENSTTRP00000012000/1-532 Len: 754 Check: 3672 Weight: 1.00 // 1 50 ENSP00000356729/1-532 MGKKVAIIGA GVSGLASIRS CLEEGLEPTC FEKSNDIGGL WKFSDHAEEG ENSBTAP00000027444/1-532 MVKKVAIIGA GISGLASIRN CLEEGLEPTC FEKGEDIGGL WKFSDHVEEG BACU000671/1-754 MVKKVAIIGA GISGLASIRS CLEEGLEPTC FEKGEDIGGL WKFSDHAEEG bmy_13407T0/1-532 MVKKVAIIGA GISGLASIRS CLEEGLEPTC FEKGEDVGGL WKFSDHAEEG ENSTTRP00000012000/1-532 MVKKVAIIGA GISGLASIRS CLEEGLEPTC FEKGEDVGGL WKFSDHAEEG 51 100 ENSP00000356729/1-532 RASIYKSVFS NSSKEMMCFP DFPFPDDFPN FMHNSKIQEY IIAFAKEKNL ENSBTAP00000027444/1-532 RASIYRSVFT NSSKEMTCFP DFPFPDDFPN FMHNSKLQEY ITMFAKEKNL BACU000671/1-754 RASIYRSVFT NSSKEMTCFP DFPFPDDFPN FMHNSKLQEY ITAFAKEKNL bmy_13407T0/1-532 RASIYRSVFT NSSKEMTCFP DFPFPDDFPN FMHNSKLQEY ITAFAKEKNL ENSTTRP00000012000/1-532 RASIYRSVFT NSSKEMTCFP DFPFPDDFPN FMHNSKLQEY ITAFAKEKNL 101 150 ENSP00000356729/1-532 LKYIQFKTFV SSVNKHPDFA TTGQWDVTTE RDGKKESAVF DAVMVCSGHH ENSBTAP00000027444/1-532 LKYIQFKTIV SSVNKRPDFQ TTGQWDVITE KDGKKESAVF DAVMICSGHH BACU000671/1-754 LRYIQLKTLV SSVSKRPDFS VTGQWDVTTE KDGKKESAVF DAVMICSGHH bmy_13407T0/1-532 LRYIQLKTLV SSVNKRPDFS VTGQWDVTTE KDGKKESAVF DAVMICSGHH ENSTTRP00000012000/1-532 LRYIQLKTLV SSVNKRPDFS VTGQWDVITE KDGKKESAVF DAVMICSGHH 151 200 ENSP00000356729/1-532 VYPNLPKESF PGLNHFKGKC FHSRDYKEPG VFNGKRVLVV GLGNSGCDIA ENSBTAP00000027444/1-532 VYPNIPKESF PGIKLFKGKC FHSRDYKEPG IFKGKRVLVI GLGNSGCDIA BACU000671/1-754 VYPNLPKESF PGLQLFKGKC LHSWDYKEPG IFKGKRVLVI GLGNSGCDIA bmy_13407T0/1-532 VYPNLPKESF PGLQLFKGKC FHSWDYKEPG IFKGKRVLVI GLGNSGCDIA ENSTTRP00000012000/1-532 VYPNLPKESF QGLQLFKGKC FHSWDYKEPG IFKGKRVLVI GLGNSGCDIA 201 250 ENSP00000356729/1-532 TELSRTAEQV MISSRSGSWV MSRVWDNGYP WDMLLVTRFG TFLKNNLPTA ENSBTAP00000027444/1-532 SELSHIAEKV IISSRSGSWV MSRVWDEGYP WDMLFITRFE TFLKNTLPTV BACU000671/1-754 SELSHTAEQV IVSSRSGSWV MSRVWHGGYP WDMMFITRFE TFLKNNLPTV bmy_13407T0/1-532 SELSHTAEQV IVSSRSGSWV MSRVWHGGYP WDMMFITRFE TFLKNNLPTV ENSTTRP00000012000/1-532 SELSHTAEQV IVSSRSGSWV MSRVWHGGYP WDMMFITRFE TFLNNNLPTV 251 300 ENSP00000356729/1-532 ISDWLYVKQM NARFKHENYG LMPLNGVLRK EPVFNDELPA SILCGIVSVK ENSBTAP00000027444/1-532 ISNWWYMKQM NARFKHENYG LMPLNSTLRK EPVFNDELPA CILCGIVTIK BACU000671/1-754 ISDWWYVKQM NARFKHENYG LMPLNGTLRK EPVFNDELPA RILCGTVTVK bmy_13407T0/1-532 ISDWWYVKQM NARFKHENYG LMPLNGTLRK EPVFNDELPA RILCGTVTVK ENSTTRP00000012000/1-532 ISDWWYVKQM NARFKHENYG LMPLNGTLRK EPVFNDELPA RILCGTVTVK 301 350 ENSP00000356729/1-532 PNVKEFTETS AIFEDGTIFE GIDCVIFATG YSFAYPFLDE SIIKSRNNEI ENSBTAP00000027444/1-532 PNVKEFTEDS AIFEDGTVFK AIDYVIFATG YSYAYPFLDD SIIKSRDNEV BACU000671/1-754 PNVKEFTETS AIFEDGTVFE AIDCVIFATG YSYAYPFLDD SIIKSRDNEV bmy_13407T0/1-532 PNVKEFTETS AIFEDGTVFE AIDCVIFATG YSYAYPFLDB SIIKSRDNEV ENSTTRP00000012000/1-532 PNVKEFTETS AIFEDGTVFE AIDCVIFATG YSYAYPFLDD SIIKSRDNEV 351 400 ENSP00000356729/1-532 ILFKGVFPPL LEKSTIAVIG FVQSLGAAIP TVDLQSRWAA QVIKGTCTLP ENSBTAP00000027444/1-532 TLFKGIFPPP LEKPTLAVIG LVQSLGAAIP TTDLQSRWAV QVIKGTCPLP BACU000671/1-754 TLFKGIFPPP LEKPTMAVIG LVQSLGAVIP TTDLQSRWAV QVIKGTCTLP bmy_13407T0/1-532 TLFKGIFPPP LEKPTMAVIG LVQSLGAVIP TTDLQSRWAV QVIKGTCTLP ENSTTRP00000012000/1-532 TLFKGIFPPS LEKPTMAVIG LVQSLGAVIP TTDLQSRWAV RVIKGTCTLP 401 450 ENSP00000356729/1-532 SMEDMMNDIN EKMEKKRKWF GKSETIQTDY IVYMDELSSF IGAKPNIPWL ENSBTAP00000027444/1-532 SVKDMMNDID EKMGKKLKLF GKSDTIQTDY VVYMDELASF IGAKPNIPWL BACU000671/1-754 SVKDMMNDID EKMGKKLKWF GKSDTIQTDY IVYMDELASF IGAKPNIPWL bmy_13407T0/1-532 SVKDMMNDID EKMGKKLKWF GKSDTIQTDY IVYMDELASF IGAKPNIPWL ENSTTRP00000012000/1-532 SVKDMMNDID EKMGKKLKWF GKSNTIQTDY IVYMDELASL IGAKPNIPWL 451 500 ENSP00000356729/1-532 FLTDPKLAME VYFGPCSPYQ FRLV------ ---------- ---------- ENSBTAP00000027444/1-532 FLTDPKLALE VYFGPCTPYQ FRLV------ ---------- ---------- BACU000671/1-754 FLTDPKLALE VYFGPCSSYQ FRLVIISTRN GSWVMNQIWD DGYPWDVVTL bmy_13407T0/1-532 FLTDPKLALE VYFGPCSPYQ FRLV------ ---------- ---------- ENSTTRP00000012000/1-532 FLTDPKLALE VYFGPCSSYQ FRLV------ ---------- ---------- 501 550 ENSP00000356729/1-532 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000027444/1-532 ---------- ---------- ---------- ---------- ---------- BACU000671/1-754 RKEPVFNDEL PSHILCGTVF IKPSVKEFTE TSAMFEDGTM FEAIDVVIFA bmy_13407T0/1-532 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000012000/1-532 ---------- ---------- ---------- ---------- ---------- 551 600 ENSP00000356729/1-532 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000027444/1-532 ---------- ---------- ---------- ---------- ---------- BACU000671/1-754 TGYGYAYPFL DDSIIKSRNN EVTLFKGIFP LLMEKPTLAV VDFVRSLGAA bmy_13407T0/1-532 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000012000/1-532 ---------- ---------- ---------- ---------- ---------- 601 650 ENSP00000356729/1-532 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000027444/1-532 ---------- ---------- ---------- ---------- ---------- BACU000671/1-754 ILTAGLQTYW TVKVFANSWT LPTTNETMDD IDEKMGKKLK WFGQSQTLQT bmy_13407T0/1-532 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000012000/1-532 ---------- ---------- ---------- ---------- ---------- 651 700 ENSP00000356729/1-532 ---------- ---------- ---------- ---------- ------GPGQ ENSBTAP00000027444/1-532 ---------- ---------- ---------- ---------- ------GPGK BACU000671/1-754 DYITYMDELG SFTGAKTNIP WLFLTDPQLA LEVYFGPCSP YQLRLMGPGK bmy_13407T0/1-532 ---------- ---------- ---------- ---------- ------GPGK ENSTTRP00000012000/1-532 ---------- ---------- ---------- ---------- ------GPGK 701 750 ENSP00000356729/1-532 WPGARNAILT QWDRSLKPMQ TRVVGRLQKP CFFFHWLKLF AIPILLIAVF ENSBTAP00000027444/1-532 WPGARNAILT QWDRLLKPMT TRVVGSPLKP CLFCNWFRPV LISVVSIAAL BACU000671/1-754 WDGARNAILT QWERTGKPTR TRAVSESKRP QPFYNLLKTL LFPVLLLAVL bmy_13407T0/1-532 WPGARNAILT QWDRILKPTT TRIVGSPLKP CLFCSWFRPV LISVLSIAAF ENSTTRP00000012000/1-532 WPGARNAILT QWDRTLKPTT TRIVGSPLKP CLFCSWFRPV LISVLSIAAF 751 800 ENSP00000356729/1-532 LVLT ENSBTAP00000027444/1-532 IVLF BACU000671/1-754 LAFY bmy_13407T0/1-532 LVLF ENSTTRP00000012000/1-532 LVLF