KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:32:33 2014 Check: 00 .. Name: ENSP00000289528/1-257 Len: 337 Check: 5978 Weight: 1.00 Name: bmy_13374T0/1-337 Len: 337 Check: 5596 Weight: 1.00 Name: ENSBTAP00000027458/1-258 Len: 337 Check: 9061 Weight: 1.00 Name: BACU019649/1-258 Len: 337 Check: 7394 Weight: 1.00 Name: ENSTTRP00000009511/1-258 Len: 337 Check: 8557 Weight: 1.00 // 1 50 ENSP00000289528/1-257 ---------- -------MEF PDLGAHCSEP S--------- ---------- bmy_13374T0/1-337 GAGLGSSGTL PRPPGTARDV PALRDDVSAP ARARGGVGAA GREALTLRPR ENSBTAP00000027458/1-258 ---------- -------MEF PDLGAHCSEP S--------- ---------- BACU019649/1-258 ---------- -------MEF PDLGAHCSEP S--------- ---------- ENSTTRP00000009511/1-258 ---------- -------MEF PDLGAHCSEP S--------- ---------- 51 100 ENSP00000289528/1-257 -CQRLDFLPL K--------- --CDACSGIF CADHVAYAQH HCGSAYQKDI bmy_13374T0/1-337 PVRRWSFRTL GLTVRSRAVS AWCDACSGIF CADHVAYAQH HCGSAYEKDI ENSBTAP00000027458/1-258 -CKRLDFLPL K--------- --CDACSGIF CADHVAYAQH HCGSAYQKDI BACU019649/1-258 -CQRLDFLPL K--------- --CDACSGIF CADHVAYAQH HCGSAYEKDI ENSTTRP00000009511/1-258 -CQRLDFLPL K--------- --CDACSGIF CADHVAYDQH HCGSAYQKDI 101 150 ENSP00000289528/1-257 QVPVCPLCNV PVPVARGEPP DRAVGEHIDR DCRSDPAQQK RKIFTNKCER bmy_13374T0/1-337 QVPVCPLCNV PVPVARGEPP DRAVGEHIDG DCRSDPAQQK RKIFTNKCER ENSBTAP00000027458/1-258 QVPVCPLCNV PVPVARGESP DRAVGEHIDR DCRSDPAQQK RKIFTNKCER BACU019649/1-258 QVPVCPLCNV PVPVARGEPP DRAVGEHIDG DCRSDPAQQK RKIFTNKCER ENSTTRP00000009511/1-258 QVPVCPLCNV PVPVARGEPP DRAVGEHIDR DCRSDPAQQK RKIFTNKCER 151 200 ENSP00000289528/1-257 AGCRQREMMK LTCERCSRNF CIKHRHPLDH DCSGEGHPTS ---------- bmy_13374T0/1-337 SGCRQREMMK LTCDHCGRNF CIKHRHPLDH DCSGEGHPTN LVEEFPSRLP ENSBTAP00000027458/1-258 AGCRQREMMK LTCDRCGRNF CIKHRHPLDH DCSGEGHPTS ---------- BACU019649/1-258 SGCRQREMMK LTCDHCGRNF CIKHRHPLDH DCSGEGHPTS ---------- ENSTTRP00000009511/1-258 SGCRQREMMK LTCDHCGRNF CIKHRHPLDH DCSGEGHPTS ---------- 201 250 ENSP00000289528/1-257 ---RAG---- ---------- ----LAAISR AQAVA-STST VPSPSQTMPS bmy_13374T0/1-337 WSGQGGTCKL TVPGGMPRVS LPYRLAAISR AQSLASSTKT IPSPNQTLPS ENSBTAP00000027458/1-258 ---RAG---- ---------- ----LAAISR AQTLASSTKT TPSPNQTLPS BACU019649/1-258 ---RAG---- ---------- ----LAAISR AQSLASSTKT IPSPNQTLPS ENSTTRP00000009511/1-258 ---RAG---- ---------- ----LAAISR AQGLASSTKT IPSPNQTLPS 251 300 ENSP00000289528/1-257 CTSPSRATTR SPSWTAPPVI ALQNGLSEDE ALQRALEMSL AETKPQVPSC bmy_13374T0/1-337 STSASRATTQ SPSRTASPVI ALQNGLSEDE ALQRALELSL AEAKPQVPSS ENSBTAP00000027458/1-258 SSSTSRAKTQ SPTRTAAPVI TLQSGLSEDE ALQRALELSL AETKPQVPSS BACU019649/1-258 STSASRATTQ SPSRTASPVI ALQNGLSEDE ALQRALELSL AEAKPQVPSS ENSTTRP00000009511/1-258 STSASRATAQ SPSRTASPVI ALQNGLSEDE ALQRALELSL AETKPQVPSS 301 350 ENSP00000289528/1-257 QEEEDLALAQ ALSASEAEYQ RQQAQSRSSK PSNCSLC bmy_13374T0/1-337 QEEEDLALAQ ALSASEAEYR QRQAQSRSLK PSNCNLC ENSBTAP00000027458/1-258 QEEEDLALAQ ALSASEAEYR QQQAQSRSLK PSNCNLC BACU019649/1-258 QEEEDLALAQ ALSASEAEYR QRQAQSRSLK PSNCNLC ENSTTRP00000009511/1-258 QEEEDLALAQ ALSASEAEYR QRQAQSRSLK PSNCNLC